메뉴 건너뛰기




Volumn 17, Issue 3, 2006, Pages 181-186

The complete mitogenome of Rhodeus uyekii (Cypriniformes, Cyprinidae)

Author keywords

Cypriniformes; Long range PCR; Mitochondrial genome; Phylogenetic analysis; Rhodeus uyekii

Indexed keywords

PROTEIN; RIBOSOME RNA; TRANSFER RNA;

EID: 33847223459     PISSN: 10425179     EISSN: 10292365     Source Type: Journal    
DOI: 10.1080/10425170600806928     Document Type: Article
Times cited : (23)

References (22)
  • 1
    • 0033561361 scopus 로고    scopus 로고
    • Animal mitochondrial genomes
    • Boore JL. 1999. Animal mitochondrial genomes. Nucleic Acid Res 27:1767-1780.
    • (1999) Nucleic Acid Res , vol.27 , pp. 1767-1780
    • Boore, J.L.1
  • 2
    • 0035179744 scopus 로고    scopus 로고
    • The complete sequence of the zebrafish (Danio rerio) mitochondrial genome and evolutionary patterns in vertebrate mitochondrial DNA
    • Broughton RE, Milam JE, Roe BA. 2001. The complete sequence of the zebrafish (Danio rerio) mitochondrial genome and evolutionary patterns in vertebrate mitochondrial DNA. Genome Res 11:1958-1967.
    • (2001) Genome Res , vol.11 , pp. 1958-1967
    • Broughton, R.E.1    Milam, J.E.2    Roe, B.A.3
  • 3
    • 0028082089 scopus 로고
    • The complete nucleotide sequence and gene organization of carp (Cyprinus carpio) mitochondrial genome
    • Chang YS, Huang FL, Lo TB. 1994. The complete nucleotide sequence and gene organization of carp (Cyprinus carpio) mitochondrial genome. J Mol Evol 38:138-155.
    • (1994) J Mol Evol , vol.38 , pp. 138-155
    • Chang, Y.S.1    Huang, F.L.2    Lo, T.B.3
  • 4
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck JP, Ronquist F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 5
    • 0242414574 scopus 로고    scopus 로고
    • Evolution of the deep-sea gulper eel mitochondrial genomes: Large-scale gene rearrangements originated within the eels
    • Inoue JG, Miya M, Tsukamoto K, Nishida M. 2003. Evolution of the deep-sea gulper eel mitochondrial genomes: Large-scale gene rearrangements originated within the eels. Mol Biol Evol 20:1917-1924.
    • (2003) Mol Biol Evol , vol.20 , pp. 1917-1924
    • Inoue, J.G.1    Miya, M.2    Tsukamoto, K.3    Nishida, M.4
  • 6
    • 3042749225 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the javeline goby Acanthogobius hasta (Perciformes, Gobiidae) and phylogenetic considerations
    • Kim IC, Kweon HS, Kim YJ, Kim CB, Gye MC, Lee WO, Lee YS, Lee JS. 2004. The complete mitochondrial genome of the javeline goby Acanthogobius hasta (Perciformes, Gobiidae) and phylogenetic considerations. Gene 336:147-153.
    • (2004) Gene , vol.336 , pp. 147-153
    • Kim, I.C.1    Kweon, H.S.2    Kim, Y.J.3    Kim, C.B.4    Gye, M.C.5    Lee, W.O.6    Lee, Y.S.7    Lee, J.S.8
  • 7
    • 27844575878 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the rayfish Raja porosa (Chondrichthyes, Rajidae)
    • Kim I-C, Jung S-O, Lee Y-M, Lee CJ, Park J-K, Lee J-S. 2005. The complete mitochondrial genome of the rayfish Raja porosa (Chondrichthyes, Rajidae). DNA Seq 16:187-194.
    • (2005) DNA Seq , vol.16 , pp. 187-194
    • Kim, I.-C.1    Jung, S.-O.2    Lee, Y.-M.3    Lee, C.J.4    Park, J.-K.5    Lee, J.-S.6
  • 8
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
    • Kumar S, Tamura K, Nei M. 2004. MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief Bioinform 5:150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 9
    • 25144447559 scopus 로고    scopus 로고
    • Molecular systematics of the gonorynchiform fishes (Teleostei) based on whole mitogenome sequences: Implications for higher-level relationships within the Otocephala
    • Lavoue S, Miya M, Inoue JG, Saitoh K, Ishiguro NB, Nishida M. 2005. Molecular systematics of the gonorynchiform fishes (Teleostei) based on whole mitogenome sequences: Implications for higher-level relationships within the Otocephala. Mol Phylogenet Evol 37:165-177.
    • (2005) Mol Phylogenet Evol , vol.37 , pp. 165-177
    • Lavoue, S.1    Miya, M.2    Inoue, J.G.3    Saitoh, K.4    Ishiguro, N.B.5    Nishida, M.6
  • 10
    • 0030854739 scopus 로고    scopus 로고
    • tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
    • Lowe TM, Eddy SR. 1997. tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acid Res 25:955-964.
    • (1997) Nucleic Acid Res , vol.25 , pp. 955-964
    • Lowe, T.M.1    Eddy, S.R.2
  • 11
    • 4344581098 scopus 로고    scopus 로고
    • Gene rearrangements and evolution of tRNA pseudogenes in the mitochondrial genome of the parrotfish (Teleostei: Perciformes: Scaridae)
    • Mabuchi K, Miya M, Satoh TP, Westneat MW, Nishida M. 2004. Gene rearrangements and evolution of tRNA pseudogenes in the mitochondrial genome of the parrotfish (Teleostei: Perciformes: Scaridae). J Mol Evol 59:287-297.
    • (2004) J Mol Evol , vol.59 , pp. 287-297
    • Mabuchi, K.1    Miya, M.2    Satoh, T.P.3    Westneat, M.W.4    Nishida, M.5
  • 12
    • 0034749003 scopus 로고    scopus 로고
    • Mitogenomic exploration of higher teleostean phylogenies: A case study for moderate-scale evolutionary genomics with 38 newly determined complete mitochondrial DNA sequences
    • Miya M, Kawaguchi A, Nishida M. 2001. Mitogenomic exploration of higher teleostean phylogenies: A case study for moderate-scale evolutionary genomics with 38 newly determined complete mitochondrial DNA sequences. Mol Biol Evol 18:1993-2009.
    • (2001) Mol Biol Evol , vol.18 , pp. 1993-2009
    • Miya, M.1    Kawaguchi, A.2    Nishida, M.3
  • 14
    • 0032373939 scopus 로고    scopus 로고
    • The complete sequence of mitochondrial genome from a gynogenetic triploid 'ginbuna' (Carassius auratus langsdorfi)
    • Murakami M, Yamashita Y, Fujitani H. 1998. The complete sequence of mitochondrial genome from a gynogenetic triploid 'ginbuna' (Carassius auratus langsdorfi). Zool Sci 15:335-337.
    • (1998) Zool Sci , vol.15 , pp. 335-337
    • Murakami, M.1    Yamashita, Y.2    Fujitani, H.3
  • 16
    • 0021876634 scopus 로고
    • The complete nucleotide sequence of the Xenopus laevis mitochondrial genome
    • Roe BA, Ma DP, Wilson RK, Wong JF. 1985. The complete nucleotide sequence of the Xenopus laevis mitochondrial genome. J Biol Chem 260:9759-9774.
    • (1985) J Biol Chem , vol.260 , pp. 9759-9774
    • Roe, B.A.1    Ma, D.P.2    Wilson, R.K.3    Wong, J.F.4
  • 17
    • 0037380299 scopus 로고    scopus 로고
    • Mitochondrial genomics of ostariophysan fishes: Perspectives on phylogeny and biogeography
    • Saitoh K, Miya M, Inoue JG, Ishiguro NB, Nishida M. 2003. Mitochondrial genomics of ostariophysan fishes: Perspectives on phylogeny and biogeography. J Mol Evol 56:464-472.
    • (2003) J Mol Evol , vol.56 , pp. 464-472
    • Saitoh, K.1    Miya, M.2    Inoue, J.G.3    Ishiguro, N.B.4    Nishida, M.5
  • 18
    • 0031593240 scopus 로고    scopus 로고
    • Mammalian mitochondrial D-loop region structural analysis: Identification of new conserved sequences and their functional and evolutionary implications
    • Sbisa E, Tanzariello F, Reyes A, Pesole G, Saccone C. 1997. Mammalian mitochondrial D-loop region structural analysis: Identification of new conserved sequences and their functional and evolutionary implications. Gene 205:125-140.
    • (1997) Gene , vol.205 , pp. 125-140
    • Sbisa, E.1    Tanzariello, F.2    Reyes, A.3    Pesole, G.4    Saccone, C.5
  • 19
    • 0030920779 scopus 로고    scopus 로고
    • Mitochondrial DNA maintenance in vertebrates
    • Shadel GS, Clayton DA. 1997. Mitochondrial DNA maintenance in vertebrates. Annu Rev Biochem 66:409-435.
    • (1997) Annu Rev Biochem , vol.66 , pp. 409-435
    • Shadel, G.S.1    Clayton, D.A.2
  • 20
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acid Res 25:4876-4882.
    • (1997) Nucleic Acid Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 21
    • 0002161128 scopus 로고
    • Mitochondrial DNA identity of Crossostoma (Homalopteridae, Pisces) from two river systems of the same geographical origin
    • Tzeng C-S, Shen S-C, Huang P-C. 1990. Mitochondrial DNA identity of Crossostoma (Homalopteridae, Pisces) from two river systems of the same geographical origin. Bull Inst Zool Acad Sin 29:11-19.
    • (1990) Bull Inst Zool Acad Sin , vol.29 , pp. 11-19
    • Tzeng, C.-S.1    Shen, S.-C.2    Huang, P.-C.3
  • 22
    • 0042672569 scopus 로고    scopus 로고
    • Complete sequence and characterization of the channel catfish mitochondrial genome
    • Waldbieser GC, Bilodeau AL, Nonneman DJ. 2003. Complete sequence and characterization of the channel catfish mitochondrial genome. DNA Seq 14:265-277.
    • (2003) DNA Seq , vol.14 , pp. 265-277
    • Waldbieser, G.C.1    Bilodeau, A.L.2    Nonneman, D.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.