Association of a new SNP in promoter region of the porcine FABP3 gene with fatness traits in a polish synthetic line

Animal Biotechnology

Volumn 18, Issue 1, 2007, Pages 37-44

  Chmurzynska, A ^a   Szydlowski, M ^a   Stachowiak, M ^a   Stankiewicz, M ^a   Switonski, M ^a  

^a POZNA UNIVERSITY OF LIFE SCIENCES   (Poland)

Author keywords

FABP3; Fatness; H FABP; Pig; QTL

Indexed keywords

ANIMAL CELL CULTURE; BIODIVERSITY; CORRELATION METHODS; ENZYMES;

FATNESS TRAITS; SINGLE NUCLEOTIDE POLYMORPHISMS; SYNTHETIC LINES;

GENES;

PIERIS BRASSICAE; SUIDAE; SUS;

DNA; FATTY ACID BINDING PROTEIN;

ADIPOSE TISSUE; ANIMAL; ANIMAL DISEASE; ARTICLE; CHEMISTRY; FEMALE; GENETICS; GENOTYPE; MALE; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYSIOLOGY; POLYMERASE CHAIN REACTION; RESTRICTION MAPPING; SINGLE NUCLEOTIDE POLYMORPHISM; SWINE;

ADIPOSE TISSUE; ANIMALS; BASE SEQUENCE; DNA; FATTY ACID-BINDING PROTEINS; FEMALE; GENOTYPE; MALE; MOLECULAR SEQUENCE DATA; POLYMERASE CHAIN REACTION; POLYMORPHISM, SINGLE NUCLEOTIDE; RESTRICTION MAPPING; SWINE;

EID: 33847165823     PISSN: 10495398     EISSN: 15322378     Source Type: Journal    
DOI: 10.1080/10495390600671560     Document Type: Article

References (15)

1. Ovilo C, Oliver A, Noguera JL, Clop A, Barragan C, Varona L, Rodriguez C, Toro M, Sanchez A, Perez-Enciso M, Silio L. Test for positional candidate genes for body composition on pig chromosome 6. Genet Sel Evol 2002; 34:465-479.
2. Zimmerman AW, Veerkamp JH. New insight into the structure and function of fatty acid-binding proteins. Cell Mol Life Sci 2002; 59:1096-1116.
3. Chmurzynska A. The multigene family of fatty acid-binding proteins (FABPs): Function, structure, and polymorphism. J Appl Genet 2006; 47:39-48.
4. Gerbens F, de Koning DJ, Harders FL, Meuwissen THE, Janss LLG, Groenen MAM, Veerkamp JH, van Arendonk JAM, te Pas MFW. The effect of adipocyte and heart fatty acid-binding protein genes on intramuscular fat and backfat content in meishan crossbred pigs. J Anim Sci 2000; 78:552-559.
5. de Koning DJ, Janss LL, Rattink AP, van Oers PA, de Vries BJ, Groenen MA, van der Poel JJ, de Groot PN, Brascamp EW, van Arendonk JA. Detection of quantitative trait loci for backfat thickness and intramuscular fat content in pigs (sus scrofa). Genetics 1999; 152:1679-1690.
6. Gerbens F, Rettenberg G, Lenstra JA, Veerkamp JH, te Pas MFW. Characterization, chromosomal localization and genetic variation of the porcine heart fatty acid-binding protein gene. Mamm Genome 1997; 8:328-332.
7. Szydlowski M, Stachowiak M, Mackowski M, Kamyczek M, Eckert R, Rozycki M, Switonski M. No major effect of the leptin gene polymorphism on porcine production traits. J Anim Breed Genet 2004; 121:149-155.
8. Hernández-Sánchez J, Visscher P, Plastow G, Haley C. Candidate gene analysis for quantitative traits using the transmission disequilibrium test: the example of the melanocortin 4-receptor in pigs. Genetics 2003; 164:637-644.
9. Dawid AP. Applications of a general propagation algorithm for probabilistic expert systems. Statist Comput 1992; 2:25-36.
10. Gerbens F, van Erp AJM, Harders FL, Verburg FJ, Meuwissen THE, Veerkamp JH, te Pas MFW. Effect of genetic variants of the heart fatty acid-binding protein gene on intramuscular fat and performance traits in pigs. J Anim Sci 1999; 77:846-852.
11. Arnyasi M, Grindflek E, Javor A, Lien S. Investigation of two candidate genes for meat quality traits in a quantitative trait locus region on SSC6: The porcine short heterodimer partner and heart fatty acid binding protein genes. J Anim Breed Genet 2006; 123: 198-203.
12. Nechtelberger D, Pires V, Sölkner J, Stur I, Brem G, Mueller M, Mueller S. Intramuscular fat content and genetic variants at fatty acid-binding protein loci in Austrian pigs. J Anim Sci 2001; 79:2798-2804.
13. Urban T, Mikolasova R, Kuciel J, Ernst M, Ingr I. A study of associations of the H-FABP genotypes with fat and meat production of pigs. J Appl Genet 2002; 43:505-509.
14. Qian Q, Kuo L, Yu YT, Rottman JN. A concise promoter region of the heart fatty acid-binding protein gene dictates tissue-appropriate expression. Circ Res 1999; 84(3):276-289.
15. Treuner M, Kozak CA, Gallahan D, Grosse R, Muller T. Cloning and characterization of the mouse gene encoding mammary-derived growth inhibitor/heart-fatty acid-binding protein. Gene 1994; 147(2):237-242.