Potential roles for autophosphorylation, kinase activity, and abundance of a CDK-activating kinase (Ee;CDKF;1) during growth in leafy spurge

Plant Molecular Biology

Volumn 63, Issue 3, 2007, Pages 365-379

  Chao, Wun S ^a   Serpe, Marcelo D ^b   Jia, Ying ^c   Shelver, Weilin L ^a   Anderson, James V ^a   Umeda, Masaaki ^d  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

^b BOISE STATE UNIVERSITY   (United States)

^c NORTH DAKOTA STATE UNIVERSITY   (United States)

^d NARA INSTITUTE OF SCIENCE AND TECHNOLOGY   (Japan)

Author keywords

Autophosphorylation; CDK activating kinase; Leafy spurge

Indexed keywords

AUTOPHOSPHORYLATION; CDK ACTIVATING KINASE; CELL CYCLE SIGNALING PATHWAYS; LEAFY SPURGE;

GENE TRANSFER; PLANT CELL CULTURE; SEED;

ENZYME KINETICS;

CYCLIN DEPENDENT KINASE; CYCLIN DEPENDENT KINASE ACTIVATING KINASE; CYCLIN-DEPENDENT KINASE-ACTIVATING KINASE; HYBRID PROTEIN; THREONINE; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ANTIBODY SPECIFICITY; ARTICLE; CHEMISTRY; ENZYMOLOGY; EUPHORBIA; GENE; GENETIC COMPLEMENTATION; GENETICS; GERMINATION; GROWTH, DEVELOPMENT AND AGING; IMMUNOLOGY; METABOLISM; MOLECULAR GENETICS; PHOSPHORYLATION; SACCHAROMYCES CEREVISIAE; SEQUENCE HOMOLOGY; SITE DIRECTED MUTAGENESIS;

AMINO ACID SEQUENCE; ANTIBODY SPECIFICITY; CYCLIN-DEPENDENT KINASES; EUPHORBIA; GENES, PLANT; GENETIC COMPLEMENTATION TEST; GERMINATION; MOLECULAR SEQUENCE DATA; MUTAGENESIS, SITE-DIRECTED; PHOSPHORYLATION; RECOMBINANT FUSION PROTEINS; SACCHAROMYCES CEREVISIAE; SEQUENCE HOMOLOGY, AMINO ACID; THREONINE;

CELLS; ENZYMES; GENES; SEEDS;

EUPHORBIA; EUPHORBIA ESULA;

EID: 33846821761     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11103-006-9094-y     Document Type: Article

References (67)

1. Anderson JV, Horvath DP (2001) Random sequencing of cDNAs and identification of mRNAs. Weed Sci 49:590-597
2. Bewley JD (1997) Seed germination and dormancy. Plant Cell 9:1055-1066
3. den Boer BGW, Murray JAH (2000) Control of plant growth and development through manipulation of cell-cycle genes. Curr Opin Biotech 11:138-145
4. Buck V, Russell P, Millar JBA (1995) Identification of a cdk-activating kinase in fission yeast. EMBO J 14:6173-6183
5. Campbell MA, Suttle JC, Sell TW (1996) Changes in cell cycle status and expression of p34cdc2 kinase during potato tuber meristem dormancy. Physiol Plant 98:743-752
6. Chao WS, Serpe MD, Anderson JV, Gesch RW, Horvath DP (2006) Sugars, hormones, and environment affect the dormancy status in underground adventitious buds of leafy spurge (Euphorbia esula). Weed Sci 54:59-68
7. Cismowski MJ, Laff GM, Solomon MJ, Reed SI (1995) KIN28 encodes a C-terminal domain kinase that controls mRNA transcription in Saccharomyces cerevisiae but lacks cyclin-dependent kinase-activating kinase (CAK) activity. Mol Cell Biol 15:2983-2992
8. Damagnez V, Mäkelä TP, Cottarel G (1995) Schizosaccharomyces pombe Mop1-Mcs2 is related to mammalian CAK. EMBO J 14:6164-6172
9. MO15 catalytic subunit of cdk-activating kinase. Oncogene 9:3127-3138
10. De Castro RD, Hilhorst HWM (2000) Dormancy, germination and the cell cycle in developing and imbibing tomato seeds. Rev Bras Fisiol Veg 12:105-136
11. De Veylder L, Beeckman T, Beemster GTS, Krols L, Terras F, Landrieu I, Van Der Schueren E, Maes S, Naudts M, Inz D (2001) Functional analysis of cyclin-dependent kinase inhibitors of Arabidopsis. Plant Cell 13:1653-1667
12. Devault A, Martinez AM, Fesquet D, Labbe JC, Morin N, Tassan JP, Nigg EA, Cavadore JC, Doree M (1995) MAT1 ('menage a trois'): a new RING finger protein subunit stabilizing cyclin H-cdk7 complexes in starfish and Xenopus CAK. EMBO J 14:5027-5036
13. Devitt ML, Stafstrom JP (1995) Cell cycle regulation during growth-dormancy cycles in pea axillary buds. Plant Mol Biol 29:255-265
14. Dewitte W, Murray JAH (2003) The plant cell cycle. Annu Rev Plant Biol 54:235-264
15. Enke DA, Kaldis P, Holmes JK, Solomon MJ (1999) The CDK-activating kinase (Cak1p) from budding yeast has an unusual ATP-binding pocket. J Biol Chem 274:1949-1956
16. Espinoza FH, Farrell A, Erdjument-Bromage H, Tempst P, Morgan DO (1996) A cyclin-dependent kinase-activating kinase (CAK) in budding yeast unrelated to vertebrate CAK. Science 273:1714-1717
17. Fabian-Marwedel T, Umeda M, Sauter M (2002) The rice cyclin-dependent kinase-activating kinase R2 regulates S-phase progression. Plant Cell 14:197-210
18. Faye G, Simon M, Valay JG, Fesquet D, Facca C (1997) Rig2, a RING finger protein that interacts with the Kin28/Ccl1 CTD kinase in yeast. Mol Gen Genet 255:460-466
19. Feaver WJ, Svejstrup JQ, Henry NL, Kornberg RD (1994) Relationship of CDK-activating kinase and RNA polymerase II CTD kinase TFIIH/TFIIK. Cell 79:1103-1109
20. Feaver WJ, Henry NL, Wang Z, Wu X, Svejstrup JQ, Bushnell DA (1997) Genes for Tfb2, Tfb3, and Tfb4 subunits of yeast transcription/repair factor IIH. J Biol Chem 272:19319-19327
21. Fesquet D, Labbe JC, Derancourt J, Capony JP, Galas S, Girard F, Lorca T, Shuttleworth J, Dorée M, Cavadore JC (1993) The MO15 gene encodes the catalytic subunit of a protein kinase that activates cdc2 and other cyclin-dependent kinases (CDKs) through phosphorylation of Thr161 and its homologues. EMBO J 12:3111-3121
22. Fisher RP, Jin P, Chamberlin HM, Morgan DO (1995) Alternative mechanisms of CAK assembly require an assembly factor or an activating kinase. Cell 83:47-57
23. Fisher RP, Morgan DO (1994) A novel cyclin associates with MO15/CDK7 to form the CDK-activating kinase. Cell 78:713-724
24. Freeley M, Volkov Y, Kelleher D, Long A (2005) Stimulus-induced phosphorylation of PKC θ at the C-terminal hydrophobic-motif in human T lymphocytes. Biochem Biophy Res Commun 334:619-630
25. Garret S, Barton WA, Knights R, Jin P, Morgan DO, Fisher RP (2001) Reciprocal activation by cyclin-dependent kinases 2 and 7 is directed by substrate specificity determinants outside the T loop. Mol Cell Biol 22:88-99
26. Gietz D, St Jean A, Woods RA, Schiestl RH (1992) Improved method for high efficiency transformation of intact yeast cells. Nucleic Acids Res 20:1425
27. Gutierrez C, Ramirez-Parra E, Castellano MM, del Pozo JC (2002) G(1) to S transition: more than a cell cycle engine switch. Curr Opin Plant Biol 5:480-486
28. Hagopian JC, Kirtley MP, Stevenson LM, Gergis RM, Russo AA, Pavletich NP, Parsons SM, Lew J (2001) Kinetic basis for activation of CDK2/cyclin A by phosphorylation. J Biol Chem 276:275-280
29. +/CDC28- related protein kinase from rice. FEBS Lett 279:149-152
30. Hermand D, Pihlak A, Westerling T, Damagnez V, Vandenhaute J, Cottarel G, Mäkelä TP (1998) Fission yeast Csk1 is a CAK-activating kinase (CAKAK). EMBO J 17:7230-7238
31. Hermand D, Westerling T, Pihlak A, Thuret JY, Vallenius T, Tiainen M, Vandenhaute J, Cottarel G, Mann C, Mäkelä TP (2001) Specificity of Cdk activation in vivo by the two Caks Mcs6 and Csk1 in fission yeast. EMBO J 20:82-90
32. Horvath DP, Anderson JV, Chao WS, Foley ME (2003). Knowing when to grow: signals regulating bud dormancy. Trends Plant Sci 8:534-540
33. Huntley RP, Murray AH (1999) The plant cell cycle. Curr Opin Plant Biol 2:440-446
34. Jeffery PD, Russo AA, Polyak K, Gibbs E, Hurwitz J, Massagué J, Pavletich NP (1995) Mechanism of cdk activation revealed by the structure of a cyclin A-CDK2 complex. Nature 376:313-320
35. Kaldis P, Sutton A, Solomon MJ (1996) The Cdk-activating kinase (CAK) from budding yeast. Cell 86:553-564
36. Kaldis P, Pitluk ZW, Bany IA, Enke DA, Wagner M, Winter E, Solomon MJ (1998a) Localization and regulation of the cdk-activating kinase (Cak1p) from budding yeast. J Cell Sci 111:3585-3596
37. Kaldis P, Russo AA, Chou HS, Pavletich NP, Solomon MJ (1998b) Human and yeast cdk-activating kinases (CAKs) display distinct substrate specificities. Mol Biol Cell 9:2545-2560
38. Kaldis P (1999) The cdk-activating kinase (CAK): from yeast to mammals. Cell Mol Life Sci 55:284-296
39. Kucera B, Cohn MA, Leubner-Metzger G (2005) Plant hormone interactions during seed dormancy release and germination. Seed Sci Res 15:281-307
40. MO15 associates with a p36 subunit and requires both nuclear translocation and Thr176 phosphorylation to generate cdk-activating kinase activity in Xenopus oocytes. EMBO J 13:5155-5164
41. Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685
42. Larochelle S, Pandur J, Fisher RP, Salz HK, Suter B (1998) Cdk7 is essential for mitosis and for in vivo Cdk-activating kinase activity. Genes Dev 12:370-381
43. Lee KM, Saiz JE, Barton WA, Fisher RP (1999) Cdc2 activation in fission yeast depends on Mcs6 and Csk1, two partially redundant Cdk-activating kinases (CAKs). Curr Biol 9:441-444
44. Martinez AM, Afshar M, Martin F, Cavadore JC, Labbé JC, Dorée M (1997) Dual phosphorylation of the T-loop in cdk: its role in controlling cyclin H binding and CAK activity. EMBO J 16:343-354
45. Morgan DO (1995) Principles of CDK regulation. Nature 374:131-134
46. Morgan DO (1997) Cyclin-dependent kinases: engines, clocks, and microprocessors. Annu Rev Cell Dev Biol 13:261-291
47. Mäkelä TP, Tassan JP, Nigg EA, Frutiger S, Hughes GJ, Weinberg RA (1994) A cyclin associated with the CDK-activating kinase MO15. Nature 371:254-257
48. cdc2. EMBO J 12:3123-3132
49. Raju MVS, Steeves TA, Coupland RT (1964) On the regeneration of root fragments of leafy spurge (Euphorbia esula L.). Weed Res 4:2-11
50. Roy R, Adamczeski JP, Seroz T, Vermeulen W, Tassan JP, Schaeffer L, Nigg EA, Hoeijmakers JHJ, Egly JM (1994) The MO15 cell cycle kinase is associated with the TFIIH transcription-DNA repair factor. Cell 79:1093-1101
51. Russo AA, Jeffrey PD, Pavletich NP (1996) Structural basis of cyclin-dependent kinase activation by phosphorylation. Nature Struct Biol 3:696-700
52. Serizawa H, Makela TP, Conaway JW, Conaway RC, Weinberg RA, Young RA (1995) Association of Cdk-activating kinase subunits with transcription factor TFIIH. Nature 374:280-282
53. Shiekhattar R, Mermelstein F, Fisher RP, Drapkin R, Dynlacht B, Wessling HC, Morgan DO, Reinberg D (1995) Cdkactivating kinase complex is a component of human transcription factor TFIIH. Nature 374:283-287
54. Shimizu-Sato S, Mori H (2001) Control of Outgrowth and Dormancy in Axillary Buds. Plant Physiol 127:1405-1413
55. Shimotohno A, Matsubayashi S, Yamaguchi M, Uchimiya H, Umeda M (2003) Differential phosphorylation activities of CDK-activating kinases in Arabidopsis thaliana. FEBS Lett 534:69-74
56. Shimotohno A, Umeda-Hara C, Bisova K, Uchimiya H, Umeda M (2004) The plant-specific kinase CDKF;1 is involved in activating phosphorylation of cyclin-dependent kinase-activating kinases in Arabidopsis. Plant Cell 16:2954-2966
57. Shimotohno A, Ohno R, Bisova K, Sakaguchi N, Huang J, Koncz C, Uchimiya H, Umeda M (2006) Diverse phosphoregulatory mechanisms controlling cyclin-dependent kinase-activating kinases in Arabidopsis. Plant J 47:701-710
58. MO15. EMBO J 12:3133-3142
59. Tassan JP, Jacquenoud M, Fry AM, Frutiger S, Hughes GJ, Nigg EA (1995) In vitro assembly of a functional human CDK7-cyclin H complex requires MAT1, a novel 36 kDa RING finger protein. EMBO J 14:5608-5617
60. Thuret JY, Valay JG, Faye G, Mann C (1996) Civ1 (CAK in vivo), a novel Cdk-activating kinase. Cell 86:565-576
61. Tsakraklides V, Solomon MJ (2002) Comparison of Cak1p-like cyclin-dependent kinase-activating kinases. J Biol Chem 277:33482-33489
62. Umeda M, Bhalerao RP, Schell J, Uchimiya H, Koncz C (1998) A distinct cylcin-dependent kinase-activating kinase of Arabidopsis thaliana. Proc Natl Acad Sci USA 95:5021-5026
63. Valay JG, Simon M, Faye G (1993) The Kin28 protein kinase is associated with a cyclin in Saccharomyces cerevisiae. J Mol Biol 234:307-310
64. Valay JG, Simon M, Dubois MF, Bensaude O, Facca C, Faye G (1995) The KIN28 gene is required both for RNA polymerase II mediated transcription and phosphorylation of the Rpb1p CTD. J Mol Biol 249:535-544
65. Wang CS, Walling LL, Eckard KJ, Lord EM (1992) Patterns of protein accumulation in developing anthers of Lilium Longiflorum correlate with histological events. Am J Bot 79:118-127
66. Yamaguchi M, Umeda M, Uchimiya H (1998) A rice homolog of Cdk7/MO15 phosphorylates both cyclin-dependent protein kinases and the carboxy-terminal domain of RNA polymerase II. Plant J 16:613-619
67. Yee A, Nichols MA, Wu L, Hall FL, Kobayashi R, Xiong Y (1995) Molecular cloning of CDK7-associated human MAT1, a cyclin-dependent kinase-activating kinase (CAK) assembly facto. Cancer Res 55:6058-6062