-
1
-
-
8544267199
-
Insights into assembly from structural analysis of bacteriophage PRD1
-
Abrescia N.G., Cockburn J.J., Grimes J.M., Sutton G.C., Diprose J.M., Butcher S.J., Fuller S.D., San Martin C., Burnett R.M., Stuart D.I., et al. Insights into assembly from structural analysis of bacteriophage PRD1. Nature 432 (2004) 68-74
-
(2004)
Nature
, vol.432
, pp. 68-74
-
-
Abrescia, N.G.1
Cockburn, J.J.2
Grimes, J.M.3
Sutton, G.C.4
Diprose, J.M.5
Butcher, S.J.6
Fuller, S.D.7
San Martin, C.8
Burnett, R.M.9
Stuart, D.I.10
-
3
-
-
0029665272
-
A model-based approach for determining orientations of biological macromolecules imaged by cryo-electron microscopy
-
Baker T.S., and Cheng R.H. A model-based approach for determining orientations of biological macromolecules imaged by cryo-electron microscopy. J. Struct. Biol. 116 (1996) 120-130
-
(1996)
J. Struct. Biol.
, vol.116
, pp. 120-130
-
-
Baker, T.S.1
Cheng, R.H.2
-
4
-
-
0032712359
-
Adding the third dimension to virus life cycles: three-dimensional reconstruction of icosahedral viruses from cryo-electron micrographs
-
Baker T.S., Olson N.H., and Fuller S.D. Adding the third dimension to virus life cycles: three-dimensional reconstruction of icosahedral viruses from cryo-electron micrographs. Microbiol. Mol. Biol. Rev. 63 (1999) 862-922
-
(1999)
Microbiol. Mol. Biol. Rev.
, vol.63
, pp. 862-922
-
-
Baker, T.S.1
Olson, N.H.2
Fuller, S.D.3
-
5
-
-
0019166535
-
Electron microscopy of cells infected with nonsense mutants of bacteriophage φ{symbol}6
-
Bamford D.H., and Mindich L. Electron microscopy of cells infected with nonsense mutants of bacteriophage φ{symbol}6. Virology 107 (1980) 222-228
-
(1980)
Virology
, vol.107
, pp. 222-228
-
-
Bamford, D.H.1
Mindich, L.2
-
6
-
-
0017065761
-
Ultrastructure and life cycle of the lipid-containing bacteriophage φ{symbol}6
-
Bamford D.H., Palva E.T., and Lounatmaa K. Ultrastructure and life cycle of the lipid-containing bacteriophage φ{symbol}6. J. Gen. Virol. 32 (1976) 249-259
-
(1976)
J. Gen. Virol.
, vol.32
, pp. 249-259
-
-
Bamford, D.H.1
Palva, E.T.2
Lounatmaa, K.3
-
7
-
-
0023337259
-
Membrane fusion in prokaryotes: bacteriophage φ{symbol}6 membrane fuses with the Pseudomonas syringae outer membrane
-
Bamford D.H., Romantschuk M., and Somerharju P.J. Membrane fusion in prokaryotes: bacteriophage φ{symbol}6 membrane fuses with the Pseudomonas syringae outer membrane. EMBO J. 6 (1987) 1467-1473
-
(1987)
EMBO J.
, vol.6
, pp. 1467-1473
-
-
Bamford, D.H.1
Romantschuk, M.2
Somerharju, P.J.3
-
8
-
-
0003273069
-
Isolation, purification and function of assembly intermediates and subviral particles of bacteriophages PRD1 and φ{symbol}6
-
Adolph K.W. (Ed), Academic Press, San Diego
-
Bamford D.H., Ojala P.M., Frilander M., Walin L., and Bamford J.K.H. Isolation, purification and function of assembly intermediates and subviral particles of bacteriophages PRD1 and φ{symbol}6. In: Adolph K.W. (Ed). Microbial Gene Techniques (1995), Academic Press, San Diego 455-474
-
(1995)
Microbial Gene Techniques
, pp. 455-474
-
-
Bamford, D.H.1
Ojala, P.M.2
Frilander, M.3
Walin, L.4
Bamford, J.K.H.5
-
10
-
-
0031985001
-
Evidence of viral capsid dynamics using limited proteolysis and mass spectrometry
-
Bothner B., Dong X.F., Bibbs L., Johnson J.E., and Siuzdak G. Evidence of viral capsid dynamics using limited proteolysis and mass spectrometry. J. Biol. Chem. 273 (1998) 673-676
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 673-676
-
-
Bothner, B.1
Dong, X.F.2
Bibbs, L.3
Johnson, J.E.4
Siuzdak, G.5
-
11
-
-
1842409555
-
Determination of the fold of the core protein of hepatitis B virus by electron cryomicroscopy
-
Bottcher B., Wynne S.A., and Crowther R.A. Determination of the fold of the core protein of hepatitis B virus by electron cryomicroscopy. Nature 386 (1997) 88-91
-
(1997)
Nature
, vol.386
, pp. 88-91
-
-
Bottcher, B.1
Wynne, S.A.2
Crowther, R.A.3
-
12
-
-
17044373783
-
The structure of the poliovirus 135S cell entry intermediate at 10-angstrom resolution reveals the location of an externalized polypeptide that binds to membranes
-
Bubeck D., Filman D.J., Cheng N., Steven A.C., Hogle J.M., and Belnap D.M. The structure of the poliovirus 135S cell entry intermediate at 10-angstrom resolution reveals the location of an externalized polypeptide that binds to membranes. J. Virol. 79 (2005) 7745-7755
-
(2005)
J. Virol.
, vol.79
, pp. 7745-7755
-
-
Bubeck, D.1
Filman, D.J.2
Cheng, N.3
Steven, A.C.4
Hogle, J.M.5
Belnap, D.M.6
-
13
-
-
0029561893
-
DNA packaging orders the membrane of bacteriophage PRD1
-
Butcher S.J., Bamford D.H., and Fuller S.D. DNA packaging orders the membrane of bacteriophage PRD1. EMBO J. 14 (1995) 6078-6086
-
(1995)
EMBO J.
, vol.14
, pp. 6078-6086
-
-
Butcher, S.J.1
Bamford, D.H.2
Fuller, S.D.3
-
14
-
-
0030872369
-
Intermediates in the assembly pathway of the double-stranded RNA virus φ{symbol}6
-
Butcher S.J., Dokland T., Ojala P.M., Bamford D.H., and Fuller S.D. Intermediates in the assembly pathway of the double-stranded RNA virus φ{symbol}6. EMBO J. 16 (1997) 4477-4487
-
(1997)
EMBO J.
, vol.16
, pp. 4477-4487
-
-
Butcher, S.J.1
Dokland, T.2
Ojala, P.M.3
Bamford, D.H.4
Fuller, S.D.5
-
15
-
-
0035826258
-
A mechanism for initiating RNA-dependent RNA polymerization
-
Butcher S.J., Grimes J.M., Makeyev E.V., Bamford D.H., and Stuart D.I. A mechanism for initiating RNA-dependent RNA polymerization. Nature 410 (2001) 235-240
-
(2001)
Nature
, vol.410
, pp. 235-240
-
-
Butcher, S.J.1
Grimes, J.M.2
Makeyev, E.V.3
Bamford, D.H.4
Stuart, D.I.5
-
16
-
-
0026700408
-
The lytic enzyme of the Pseudomonas phage φ{symbol}6. Purification and biochemical characterization
-
Caldentey J., and Bamford D.H. The lytic enzyme of the Pseudomonas phage φ{symbol}6. Purification and biochemical characterization. Biochim. Biophys. Acta 1159 (1992) 44-50
-
(1992)
Biochim. Biophys. Acta
, vol.1159
, pp. 44-50
-
-
Caldentey, J.1
Bamford, D.H.2
-
17
-
-
0030937751
-
Visualization of a 4-helix bundle in the hepatitis B virus capsid by cryo-electron microscopy
-
Conway J.F., Cheng N., Zlotnick A., Wingfield P.T., Stahl S.J., and Steven A.C. Visualization of a 4-helix bundle in the hepatitis B virus capsid by cryo-electron microscopy. Nature 386 (1997) 91-94
-
(1997)
Nature
, vol.386
, pp. 91-94
-
-
Conway, J.F.1
Cheng, N.2
Zlotnick, A.3
Wingfield, P.T.4
Stahl, S.J.5
Steven, A.C.6
-
18
-
-
0015242164
-
Procedures for three-dimensional reconstruction of spherical viruses by Fourier synthesis from electron micrographs
-
Crowther R.A. Procedures for three-dimensional reconstruction of spherical viruses by Fourier synthesis from electron micrographs. Philos. Trans. R. Soc. Lond. B Biol. Sci. 261 (1971) 221-230
-
(1971)
Philos. Trans. R. Soc. Lond. B Biol. Sci.
, vol.261
, pp. 221-230
-
-
Crowther, R.A.1
-
19
-
-
0034663597
-
Application of multiple sequence alignment profiles to improve protein secondary structure prediction
-
Cuff J.A., and Barton G.J. Application of multiple sequence alignment profiles to improve protein secondary structure prediction. Proteins 40 (2000) 502-511
-
(2000)
Proteins
, vol.40
, pp. 502-511
-
-
Cuff, J.A.1
Barton, G.J.2
-
20
-
-
16244394849
-
Penetration of enveloped double-stranded RNA bacteriophages φ{symbol}13 and φ{symbol}6 into Pseudomonas syringae cells
-
Daugelavicius R., Cvirkaite V., Gaidelyte A., Bakiene E., Gabrenaite-Verkhovskaya R., and Bamford D.H. Penetration of enveloped double-stranded RNA bacteriophages φ{symbol}13 and φ{symbol}6 into Pseudomonas syringae cells. J. Virol. 79 (2005) 5017-5026
-
(2005)
J. Virol.
, vol.79
, pp. 5017-5026
-
-
Daugelavicius, R.1
Cvirkaite, V.2
Gaidelyte, A.3
Bakiene, E.4
Gabrenaite-Verkhovskaya, R.5
Bamford, D.H.6
-
21
-
-
0033607480
-
A symmetry mismatch at the site of RNA packaging in the polymerase complex of dsRNA bacteriophage φ{symbol}6
-
de Haas F., Paatero A.O., Mindich L., Bamford D.H., and Fuller S.D. A symmetry mismatch at the site of RNA packaging in the polymerase complex of dsRNA bacteriophage φ{symbol}6. J. Mol. Biol. 294 (1999) 357-372
-
(1999)
J. Mol. Biol.
, vol.294
, pp. 357-372
-
-
de Haas, F.1
Paatero, A.O.2
Mindich, L.3
Bamford, D.H.4
Fuller, S.D.5
-
22
-
-
33745207098
-
Native hepatitis B virions and capsids visualized by electron cryomicroscopy
-
Dryden K.A., Wieland S.F., Whitten-Bauer C., Gerin J.L., Chisari F.V., and Yeager M. Native hepatitis B virions and capsids visualized by electron cryomicroscopy. Mol. Cell 22 (2006) 843-850
-
(2006)
Mol. Cell
, vol.22
, pp. 843-850
-
-
Dryden, K.A.1
Wieland, S.F.2
Whitten-Bauer, C.3
Gerin, J.L.4
Chisari, F.V.5
Yeager, M.6
-
23
-
-
0029924120
-
Three-dimensional reconstruction of icosahedral particles-the uncommon line
-
Fuller S.D., Butcher S.J., Cheng R.H., and Baker T.S. Three-dimensional reconstruction of icosahedral particles-the uncommon line. J. Struct. Biol. 116 (1996) 48-55
-
(1996)
J. Struct. Biol.
, vol.116
, pp. 48-55
-
-
Fuller, S.D.1
Butcher, S.J.2
Cheng, R.H.3
Baker, T.S.4
-
24
-
-
0023841702
-
Nucleotide sequence of the middle dsRNA segment of bacteriophage φ{symbol}6: placement of the genes of membrane-associated proteins
-
Gottlieb P., Metzger S., Romantschuk M., Carton J., Strassman J., Bamford D.H., Kalkkinen N., and Mindich L. Nucleotide sequence of the middle dsRNA segment of bacteriophage φ{symbol}6: placement of the genes of membrane-associated proteins. Virology 163 (1988) 183-190
-
(1988)
Virology
, vol.163
, pp. 183-190
-
-
Gottlieb, P.1
Metzger, S.2
Romantschuk, M.3
Carton, J.4
Strassman, J.5
Bamford, D.H.6
Kalkkinen, N.7
Mindich, L.8
-
25
-
-
0025030197
-
In vitro replication, packaging, and transcription of the segmented double-stranded RNA genome of bacteriophage φ{symbol}6: studies with procapsids assembled from plasmid-encoded proteins
-
Gottlieb P., Strassman J., Qiao X.Y., Frucht A., and Mindich L. In vitro replication, packaging, and transcription of the segmented double-stranded RNA genome of bacteriophage φ{symbol}6: studies with procapsids assembled from plasmid-encoded proteins. J. Bacteriol. 172 (1990) 5774-5782
-
(1990)
J. Bacteriol.
, vol.172
, pp. 5774-5782
-
-
Gottlieb, P.1
Strassman, J.2
Qiao, X.Y.3
Frucht, A.4
Mindich, L.5
-
26
-
-
0035995920
-
Characterization of φ{symbol}12, a bacteriophage related to φ{symbol}6: nucleotide sequence of the large double-stranded RNA
-
Gottlieb P., Potgieter C., Wei H., and Toporovsky I. Characterization of φ{symbol}12, a bacteriophage related to φ{symbol}6: nucleotide sequence of the large double-stranded RNA. Virology 295 (2002) 266-271
-
(2002)
Virology
, vol.295
, pp. 266-271
-
-
Gottlieb, P.1
Potgieter, C.2
Wei, H.3
Toporovsky, I.4
-
27
-
-
0036349164
-
Characterization of φ{symbol}12, a bacteriophage related to φ{symbol}6: nucleotide sequence of the small and middle double-stranded RNA
-
Gottlieb P., Wei H., Potgieter C., and Toporovsky I. Characterization of φ{symbol}12, a bacteriophage related to φ{symbol}6: nucleotide sequence of the small and middle double-stranded RNA. Virology 293 (2002) 118-124
-
(2002)
Virology
, vol.293
, pp. 118-124
-
-
Gottlieb, P.1
Wei, H.2
Potgieter, C.3
Toporovsky, I.4
-
28
-
-
0033553535
-
The highly ordered double-stranded RNA genome of bluetongue virus revealed by crystallography
-
Gouet P., Diprose J.M., Grimes J.M., Malby R., Burroughs J.N., Zientara S., Stuart D.I., and Mertens P.P. The highly ordered double-stranded RNA genome of bluetongue virus revealed by crystallography. Cell 97 (1999) 481-490
-
(1999)
Cell
, vol.97
, pp. 481-490
-
-
Gouet, P.1
Diprose, J.M.2
Grimes, J.M.3
Malby, R.4
Burroughs, J.N.5
Zientara, S.6
Stuart, D.I.7
Mertens, P.P.8
-
29
-
-
33746837397
-
PRD1-dissecting the genome, structure and entry
-
Calendar R. (Ed), Oxford University Press, New York
-
Grahn A.M., Butcher S., Bamford J.K.H., and Bamford D.H. PRD1-dissecting the genome, structure and entry. In: Calendar R. (Ed). The Bacteriophages (2006), Oxford University Press, New York 161-170
-
(2006)
The Bacteriophages
, pp. 161-170
-
-
Grahn, A.M.1
Butcher, S.2
Bamford, J.K.H.3
Bamford, D.H.4
-
30
-
-
0032189765
-
The atomic structure of the bluetongue virus core
-
Grimes J.M., Burroughs J.N., Gouet P., Diprose J.M., Malby R., Zientara S., Mertens P.P., and Stuart D.I. The atomic structure of the bluetongue virus core. Nature 395 (1998) 470-478
-
(1998)
Nature
, vol.395
, pp. 470-478
-
-
Grimes, J.M.1
Burroughs, J.N.2
Gouet, P.3
Diprose, J.M.4
Malby, R.5
Zientara, S.6
Mertens, P.P.7
Stuart, D.I.8
-
31
-
-
0345306753
-
Three-dimensional structure of herpes simplex virus from cryo-electron tomography
-
Grünewald K., Desai P., Winkler D.C., Heymann J.B., Belnap D.M., Baumeister W., and Steven A.C. Three-dimensional structure of herpes simplex virus from cryo-electron tomography. Science 302 (2003) 1396-1398
-
(2003)
Science
, vol.302
, pp. 1396-1398
-
-
Grünewald, K.1
Desai, P.2
Winkler, D.C.3
Heymann, J.B.4
Belnap, D.M.5
Baumeister, W.6
Steven, A.C.7
-
32
-
-
0024059552
-
Chemical crosslinking of bacteriophage φ{symbol}6 nucleocapsid proteins
-
Hantula J., and Bamford D.H. Chemical crosslinking of bacteriophage φ{symbol}6 nucleocapsid proteins. Virology 165 (1988) 482-488
-
(1988)
Virology
, vol.165
, pp. 482-488
-
-
Hantula, J.1
Bamford, D.H.2
-
33
-
-
0000313739
-
Similarity measures between images. Exact filters for general geometry of 3D reconstructions
-
Harauz G., and van Heel M. Similarity measures between images. Exact filters for general geometry of 3D reconstructions. Optik 73 (1986) 146-156
-
(1986)
Optik
, vol.73
, pp. 146-156
-
-
Harauz, G.1
van Heel, M.2
-
34
-
-
0035783171
-
Bsoft: image and molecular processing in electron microscopy
-
Heymann J.B. Bsoft: image and molecular processing in electron microscopy. J. Struct. Biol. 133 (2001) 156-169
-
(2001)
J. Struct. Biol.
, vol.133
, pp. 156-169
-
-
Heymann, J.B.1
-
35
-
-
0034690810
-
Characterization of φ{symbol}8, a bacteriophage containing three double-stranded RNA genomic segments and distantly related to φ{symbol}6
-
Hoogstraten D., Qiao X., Sun Y., Hu A., Onodera S., and Mindich L. Characterization of φ{symbol}8, a bacteriophage containing three double-stranded RNA genomic segments and distantly related to φ{symbol}6. Virology 272 (2000) 218-224
-
(2000)
Virology
, vol.272
, pp. 218-224
-
-
Hoogstraten, D.1
Qiao, X.2
Sun, Y.3
Hu, A.4
Onodera, S.5
Mindich, L.6
-
37
-
-
4344559453
-
The PM2 virion has a novel organization with an internal membrane and pentameric receptor binding spikes
-
Huiskonen J.T., Kivelä H.M., Bamford D.H., and Butcher S.J. The PM2 virion has a novel organization with an internal membrane and pentameric receptor binding spikes. Nat. Struct. Mol. Biol. 11 (2004) 850-856
-
(2004)
Nat. Struct. Mol. Biol.
, vol.11
, pp. 850-856
-
-
Huiskonen, J.T.1
Kivelä, H.M.2
Bamford, D.H.3
Butcher, S.J.4
-
38
-
-
33744821066
-
Structure of the bacteriophage φ{symbol}6 nucleocapsid suggests a mechanism for sequential RNA packaging
-
Huiskonen J.T., de Haas F., Bubeck D., Bamford D.H., Fuller S.D., and Butcher S.J. Structure of the bacteriophage φ{symbol}6 nucleocapsid suggests a mechanism for sequential RNA packaging. Structure 14 (2006) 1039-1048
-
(2006)
Structure
, vol.14
, pp. 1039-1048
-
-
Huiskonen, J.T.1
de Haas, F.2
Bubeck, D.3
Bamford, D.H.4
Fuller, S.D.5
Butcher, S.J.6
-
39
-
-
34248171243
-
Structure of a hexameric RNA packaging motor in a viral polymerase complex
-
10.1016/j.jsb.2006.08.021 in press. Published online October 7, 2006
-
Huiskonen J.T., Jäälinoja H.T., Briggs J.A.G., Fuller S.D., and Butcher S.J. Structure of a hexameric RNA packaging motor in a viral polymerase complex. J. Struct. Biol. (2006) 10.1016/j.jsb.2006.08.021 in press. Published online October 7, 2006
-
(2006)
J. Struct. Biol.
-
-
Huiskonen, J.T.1
Jäälinoja, H.T.2
Briggs, J.A.G.3
Fuller, S.D.4
Butcher, S.J.5
-
40
-
-
84947235547
-
-
Ji, Y., Marinescu, D.C., Zhang, W., and Baker, T.S. (2003). Orientation refinement of virus structures with unknown symmetry. In Proceedings of the 17th International Symposium on Parallel and Distributed Processing (Nice, France: IEEE Press), =http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=1213138.
-
-
-
-
41
-
-
0035906702
-
Bridging the information gap: computational tools for intermediate resolution structure interpretation
-
Jiang W., Baker M.L., Ludtke S.J., and Chiu W. Bridging the information gap: computational tools for intermediate resolution structure interpretation. J. Mol. Biol. 308 (2001) 1033-1044
-
(2001)
J. Mol. Biol.
, vol.308
, pp. 1033-1044
-
-
Jiang, W.1
Baker, M.L.2
Ludtke, S.J.3
Chiu, W.4
-
42
-
-
0028208774
-
Isolation and characterization of nonsense mutations in gene 10 of bacteriophage φ{symbol}6
-
Johnson III M.D., and Mindich L. Isolation and characterization of nonsense mutations in gene 10 of bacteriophage φ{symbol}6. J. Virol. 68 (1994) 2331-2338
-
(1994)
J. Virol.
, vol.68
, pp. 2331-2338
-
-
Johnson III, M.D.1
Mindich, L.2
-
43
-
-
0037427447
-
Conserved intermediates on the assembly pathway of double-stranded RNA bacteriophages
-
Kainov D.E., Butcher S.J., Bamford D.H., and Tuma R. Conserved intermediates on the assembly pathway of double-stranded RNA bacteriophages. J. Mol. Biol. 328 (2003) 791-804
-
(2003)
J. Mol. Biol.
, vol.328
, pp. 791-804
-
-
Kainov, D.E.1
Butcher, S.J.2
Bamford, D.H.3
Tuma, R.4
-
44
-
-
0348111460
-
RNA packaging device of double-stranded RNA bacteriophages, possibly as simple as hexamer of P4 protein
-
Kainov D.E., Pirttimaa M., Tuma R., Butcher S.J., Thomas Jr. G.J., Bamford D.H., and Makeyev E.V. RNA packaging device of double-stranded RNA bacteriophages, possibly as simple as hexamer of P4 protein. J. Biol. Chem. 278 (2003) 48084-48091
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 48084-48091
-
-
Kainov, D.E.1
Pirttimaa, M.2
Tuma, R.3
Butcher, S.J.4
Thomas Jr., G.J.5
Bamford, D.H.6
Makeyev, E.V.7
-
45
-
-
0018859037
-
Penetration and partial uncoating of bacteriophage φ{symbol}6 particle
-
Kakitani H., Iba H., and Okada Y. Penetration and partial uncoating of bacteriophage φ{symbol}6 particle. Virology 101 (1980) 475-483
-
(1980)
Virology
, vol.101
, pp. 475-483
-
-
Kakitani, H.1
Iba, H.2
Okada, Y.3
-
46
-
-
0026664623
-
Bacteriophage φ{symbol}6 envelope elucidated by chemical cross-linking, immunodetection, and cryoelectron microscopy
-
Kenney J.M., Hantula J., Fuller S.D., Mindich L., Ojala P.M., and Bamford D.H. Bacteriophage φ{symbol}6 envelope elucidated by chemical cross-linking, immunodetection, and cryoelectron microscopy. Virology 190 (1992) 635-644
-
(1992)
Virology
, vol.190
, pp. 635-644
-
-
Kenney, J.M.1
Hantula, J.2
Fuller, S.D.3
Mindich, L.4
Ojala, P.M.5
Bamford, D.H.6
-
47
-
-
0033787642
-
Local average intensity-based method for identifying spherical particles in electron micrographs
-
Kivioja T., Ravantti J., Verkhovsky A., Ukkonen E., and Bamford D. Local average intensity-based method for identifying spherical particles in electron micrographs. J. Struct. Biol. 131 (2000) 126-134
-
(2000)
J. Struct. Biol.
, vol.131
, pp. 126-134
-
-
Kivioja, T.1
Ravantti, J.2
Verkhovsky, A.3
Ukkonen, E.4
Bamford, D.5
-
48
-
-
0029644940
-
Where freedom is given, liberties are taken
-
Kleywegt G.J., and Jones T.A. Where freedom is given, liberties are taken. Structure 3 (1995) 535-540
-
(1995)
Structure
, vol.3
, pp. 535-540
-
-
Kleywegt, G.J.1
Jones, T.A.2
-
49
-
-
3242665450
-
The origin of phospholipids of the enveloped bacteriophage φ{symbol}6
-
Laurinavicius S., Kakela R., Bamford D.H., and Somerharju P. The origin of phospholipids of the enveloped bacteriophage φ{symbol}6. Virology 326 (2004) 182-190
-
(2004)
Virology
, vol.326
, pp. 182-190
-
-
Laurinavicius, S.1
Kakela, R.2
Bamford, D.H.3
Somerharju, P.4
-
50
-
-
27944481316
-
Membrane proteins modulate the bilayer curvature in the bacterial virus Bam35
-
Laurinmäki P.A., Huiskonen J.T., Bamford D.H., and Butcher S.J. Membrane proteins modulate the bilayer curvature in the bacterial virus Bam35. Structure 13 (2005) 1819-1828
-
(2005)
Structure
, vol.13
, pp. 1819-1828
-
-
Laurinmäki, P.A.1
Huiskonen, J.T.2
Bamford, D.H.3
Butcher, S.J.4
-
51
-
-
20744434561
-
Cooperative mechanism of RNA packaging motor
-
Lisal J., and Tuma R. Cooperative mechanism of RNA packaging motor. J. Biol. Chem. 280 (2005) 23157-23164
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 23157-23164
-
-
Lisal, J.1
Tuma, R.2
-
52
-
-
0346463026
-
Enzymatic mechanism of RNA translocation in double-stranded RNA bacteriophages
-
Lisal J., Kainov D.E., Bamford D.H., Thomas Jr. G.J., and Tuma R. Enzymatic mechanism of RNA translocation in double-stranded RNA bacteriophages. J. Biol. Chem. 279 (2004) 1343-1350
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 1343-1350
-
-
Lisal, J.1
Kainov, D.E.2
Bamford, D.H.3
Thomas Jr., G.J.4
Tuma, R.5
-
53
-
-
0033377664
-
EMAN: semiautomated software for high-resolution single-particle reconstructions
-
Ludtke S.J., Baldwin P.R., and Chiu W. EMAN: semiautomated software for high-resolution single-particle reconstructions. J. Struct. Biol. 128 (1999) 82-97
-
(1999)
J. Struct. Biol.
, vol.128
, pp. 82-97
-
-
Ludtke, S.J.1
Baldwin, P.R.2
Chiu, W.3
-
54
-
-
0034669114
-
The polymerase subunit of a dsRNA virus plays a central role in the regulation of viral RNA metabolism
-
Makeyev E.V., and Bamford D.H. The polymerase subunit of a dsRNA virus plays a central role in the regulation of viral RNA metabolism. EMBO J. 19 (2000) 6275-6284
-
(2000)
EMBO J.
, vol.19
, pp. 6275-6284
-
-
Makeyev, E.V.1
Bamford, D.H.2
-
55
-
-
0034602836
-
Replicase activity of purified recombinant protein P2 of double-stranded RNA bacteriophage φ{symbol}6
-
Makeyev E.V., and Bamford D.H. Replicase activity of purified recombinant protein P2 of double-stranded RNA bacteriophage φ{symbol}6. EMBO J. 19 (2000) 124-133
-
(2000)
EMBO J.
, vol.19
, pp. 124-133
-
-
Makeyev, E.V.1
Bamford, D.H.2
-
56
-
-
4544386863
-
Atomic snapshots of an RNA packaging motor reveal conformational changes linking ATP hydrolysis to RNA translocation
-
Mancini E.J., Kainov D.E., Grimes J.M., Tuma R., Bamford D.H., and Stuart D.I. Atomic snapshots of an RNA packaging motor reveal conformational changes linking ATP hydrolysis to RNA translocation. Cell 118 (2004) 743-755
-
(2004)
Cell
, vol.118
, pp. 743-755
-
-
Mancini, E.J.1
Kainov, D.E.2
Grimes, J.M.3
Tuma, R.4
Bamford, D.H.5
Stuart, D.I.6
-
57
-
-
0035475275
-
Space-time tradeoffs for parallel 3D reconstruction algorithms for atomic virus structure determination
-
Marinescu D.C., Ji Y., and Lynch R.E. Space-time tradeoffs for parallel 3D reconstruction algorithms for atomic virus structure determination. Concurrency Computat. Pract. Exper. 13 (2001) 1083-1106
-
(2001)
Concurrency Computat. Pract. Exper.
, vol.13
, pp. 1083-1106
-
-
Marinescu, D.C.1
Ji, Y.2
Lynch, R.E.3
-
58
-
-
0022453903
-
Nucleotide sequence of the small double-stranded RNA segment of bacteriophage φ{symbol}6: novel mechanism of natural translational control
-
McGraw T., Mindich L., and Frangione B. Nucleotide sequence of the small double-stranded RNA segment of bacteriophage φ{symbol}6: novel mechanism of natural translational control. J. Virol. 58 (1986) 142-151
-
(1986)
J. Virol.
, vol.58
, pp. 142-151
-
-
McGraw, T.1
Mindich, L.2
Frangione, B.3
-
60
-
-
0038441501
-
Accurate determination of local defocus and specimen tilt in electron microscopy
-
Mindell J.A., and Grigorieff N. Accurate determination of local defocus and specimen tilt in electron microscopy. J. Struct. Biol. 142 (2003) 334-347
-
(2003)
J. Struct. Biol.
, vol.142
, pp. 334-347
-
-
Mindell, J.A.1
Grigorieff, N.2
-
61
-
-
1542268889
-
Packaging, replication and recombination of the segmented genome of bacteriophage φ{symbol}6 and its relatives
-
Mindich L. Packaging, replication and recombination of the segmented genome of bacteriophage φ{symbol}6 and its relatives. Virus Res. 101 (2004) 83-92
-
(2004)
Virus Res.
, vol.101
, pp. 83-92
-
-
Mindich, L.1
-
62
-
-
0017103791
-
The morphogenesis of bacteriophage φ{symbol}6: particles formed by nonsense mutants
-
Mindich L., Sinclair J.F., and Cohen J. The morphogenesis of bacteriophage φ{symbol}6: particles formed by nonsense mutants. Virology 75 (1976) 224-231
-
(1976)
Virology
, vol.75
, pp. 224-231
-
-
Mindich, L.1
Sinclair, J.F.2
Cohen, J.3
-
63
-
-
0018649477
-
Temperature-dependent compositional changes in the envelope of φ{symbol}6
-
Mindich L., Lehman J., and Huang R. Temperature-dependent compositional changes in the envelope of φ{symbol}6. Virology 97 (1979) 171-176
-
(1979)
Virology
, vol.97
, pp. 171-176
-
-
Mindich, L.1
Lehman, J.2
Huang, R.3
-
64
-
-
0023991207
-
Nucleotide sequence of the large double-stranded RNA segment of bacteriophage φ{symbol}6: genes specifying the viral replicase and transcriptase
-
Mindich L., Nemhauser I., Gottlieb P., Romantschuk M., Carton J., Frucht S., Strassman J., Bamford D.H., and Kalkkinen N. Nucleotide sequence of the large double-stranded RNA segment of bacteriophage φ{symbol}6: genes specifying the viral replicase and transcriptase. J. Virol. 62 (1988) 1180-1185
-
(1988)
J. Virol.
, vol.62
, pp. 1180-1185
-
-
Mindich, L.1
Nemhauser, I.2
Gottlieb, P.3
Romantschuk, M.4
Carton, J.5
Frucht, S.6
Strassman, J.7
Bamford, D.H.8
Kalkkinen, N.9
-
65
-
-
0032811843
-
Isolation of additional bacteriophages with genomes of segmented double-stranded RNA
-
Mindich L., Qiao X., Qiao J., Onodera S., Romantschuk M., and Hoogstraten D. Isolation of additional bacteriophages with genomes of segmented double-stranded RNA. J. Bacteriol. 181 (1999) 4505-4508
-
(1999)
J. Bacteriol.
, vol.181
, pp. 4505-4508
-
-
Mindich, L.1
Qiao, X.2
Qiao, J.3
Onodera, S.4
Romantschuk, M.5
Hoogstraten, D.6
-
66
-
-
0036785914
-
L-A virus at 3.4 Å resolution reveals particle architecture and mRNA decapping mechanism
-
Naitow H., Tang J., Canady M., Wickner R.B., and Johnson J.E. L-A virus at 3.4 Å resolution reveals particle architecture and mRNA decapping mechanism. Nat. Struct. Biol. 9 (2002) 725-728
-
(2002)
Nat. Struct. Biol.
, vol.9
, pp. 725-728
-
-
Naitow, H.1
Tang, J.2
Canady, M.3
Wickner, R.B.4
Johnson, J.E.5
-
67
-
-
12444292684
-
The atomic structure of rice dwarf virus reveals the self-assembly mechanism of component proteins
-
Nakagawa A., Miyazaki N., Taka J., Naitow H., Ogawa A., Fujimoto Z., Mizuno H., Higashi T., Watanabe Y., Omura T., et al. The atomic structure of rice dwarf virus reveals the self-assembly mechanism of component proteins. Structure 11 (2003) 1227-1238
-
(2003)
Structure
, vol.11
, pp. 1227-1238
-
-
Nakagawa, A.1
Miyazaki, N.2
Taka, J.3
Naitow, H.4
Ogawa, A.5
Fujimoto, Z.6
Mizuno, H.7
Higashi, T.8
Watanabe, Y.9
Omura, T.10
-
68
-
-
0034623005
-
T-Coffee: a novel method for fast and accurate multiple sequence alignment
-
Notredame C., Higgins D.G., and Heringa J. T-Coffee: a novel method for fast and accurate multiple sequence alignment. J. Mol. Biol. 302 (2000) 205-217
-
(2000)
J. Mol. Biol.
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
69
-
-
0025606353
-
In vitro assembly of infectious nucleocapsids of bacteriophage φ{symbol}6: formation of a recombinant double-stranded RNA virus
-
Olkkonen V.M., Gottlieb P., Strassman J., Qiao X.Y., Bamford D.H., and Mindich L. In vitro assembly of infectious nucleocapsids of bacteriophage φ{symbol}6: formation of a recombinant double-stranded RNA virus. Proc. Natl. Acad. Sci. USA 87 (1990) 9173-9177
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 9173-9177
-
-
Olkkonen, V.M.1
Gottlieb, P.2
Strassman, J.3
Qiao, X.Y.4
Bamford, D.H.5
Mindich, L.6
-
70
-
-
0025892607
-
Generation of infectious nucleocapsids by in vitro assembly of the shell protein on to the polymerase complex of the dsRNA bacteriophage φ{symbol}6
-
Olkkonen V.M., Ojala P.M., and Bamford D.H. Generation of infectious nucleocapsids by in vitro assembly of the shell protein on to the polymerase complex of the dsRNA bacteriophage φ{symbol}6. J. Mol. Biol. 218 (1991) 569-581
-
(1991)
J. Mol. Biol.
, vol.218
, pp. 569-581
-
-
Olkkonen, V.M.1
Ojala, P.M.2
Bamford, D.H.3
-
71
-
-
1542328800
-
Self-assembly of double-stranded RNA bacteriophages
-
Poranen M.M., and Tuma R. Self-assembly of double-stranded RNA bacteriophages. Virus Res. 101 (2004) 93-100
-
(2004)
Virus Res.
, vol.101
, pp. 93-100
-
-
Poranen, M.M.1
Tuma, R.2
-
72
-
-
0035002345
-
Self assembly of a viral molecular machine from purified protein and RNA constituents
-
Poranen M.M., Paatero A.O., Tuma R., and Bamford D.H. Self assembly of a viral molecular machine from purified protein and RNA constituents. Mol. Cell 7 (2001) 845-854
-
(2001)
Mol. Cell
, vol.7
, pp. 845-854
-
-
Poranen, M.M.1
Paatero, A.O.2
Tuma, R.3
Bamford, D.H.4
-
73
-
-
26944486944
-
Assembly of double-stranded RNA bacteriophages
-
Poranen M.M., Tuma R., and Bamford D.H. Assembly of double-stranded RNA bacteriophages. Adv. Virus Res. 64 (2005) 15-43
-
(2005)
Adv. Virus Res.
, vol.64
, pp. 15-43
-
-
Poranen, M.M.1
Tuma, R.2
Bamford, D.H.3
-
74
-
-
0029839752
-
Visualization of ordered genomic RNA and localization of transcriptional complexes in rotavirus
-
Prasad B.V., Rothnagel R., Zeng C.Q., Jakana J., Lawton J.A., Chiu W., and Estes M.K. Visualization of ordered genomic RNA and localization of transcriptional complexes in rotavirus. Nature 382 (1996) 471-473
-
(1996)
Nature
, vol.382
, pp. 471-473
-
-
Prasad, B.V.1
Rothnagel, R.2
Zeng, C.Q.3
Jakana, J.4
Lawton, J.A.5
Chiu, W.6
Estes, M.K.7
-
75
-
-
0034665230
-
Characterization of φ{symbol}13, a bacteriophage related to φ{symbol}6 and containing three dsRNA genomic segments
-
Qiao X., Qiao J., Onodera S., and Mindich L. Characterization of φ{symbol}13, a bacteriophage related to φ{symbol}6 and containing three dsRNA genomic segments. Virology 275 (2000) 218-224
-
(2000)
Virology
, vol.275
, pp. 218-224
-
-
Qiao, X.1
Qiao, J.2
Onodera, S.3
Mindich, L.4
-
76
-
-
0142245619
-
Analysis of specific binding involved in genomic packaging of the double-stranded-RNA bacteriophage φ{symbol}6
-
Qiao X., Qiao J., and Mindich L. Analysis of specific binding involved in genomic packaging of the double-stranded-RNA bacteriophage φ{symbol}6. J. Bacteriol. 185 (2003) 6409-6414
-
(2003)
J. Bacteriol.
, vol.185
, pp. 6409-6414
-
-
Qiao, X.1
Qiao, J.2
Mindich, L.3
-
77
-
-
0034720237
-
Structure of the reovirus core at 3.6 Å resolution
-
Reinisch K.M., Nibert M.L., and Harrison S.C. Structure of the reovirus core at 3.6 Å resolution. Nature 404 (2000) 960-967
-
(2000)
Nature
, vol.404
, pp. 960-967
-
-
Reinisch, K.M.1
Nibert, M.L.2
Harrison, S.C.3
-
78
-
-
0022343386
-
Function of pili in bacteriophage φ{symbol}6 penetration
-
Romantschuk M., and Bamford D.H. Function of pili in bacteriophage φ{symbol}6 penetration. J. Gen. Virol. 66 (1985) 2461-2469
-
(1985)
J. Gen. Virol.
, vol.66
, pp. 2461-2469
-
-
Romantschuk, M.1
Bamford, D.H.2
-
79
-
-
0024024133
-
The nucleocapsid of bacteriophage φ{symbol}6 penetrates the host cytoplasmic membrane
-
Romantschuk M., Olkkonen V.M., and Bamford D.H. The nucleocapsid of bacteriophage φ{symbol}6 penetrates the host cytoplasmic membrane. EMBO J. 7 (1988) 1821-1829
-
(1988)
EMBO J.
, vol.7
, pp. 1821-1829
-
-
Romantschuk, M.1
Olkkonen, V.M.2
Bamford, D.H.3
-
80
-
-
0030586878
-
The structure of aquareovirus shows how the different geometries of the two layers of the capsid are reconciled to provide symmetrical interactions and stabilization
-
Shaw A.L., Samal S.K., Subramanian K., and Prasad B.V. The structure of aquareovirus shows how the different geometries of the two layers of the capsid are reconciled to provide symmetrical interactions and stabilization. Structure 4 (1996) 957-967
-
(1996)
Structure
, vol.4
, pp. 957-967
-
-
Shaw, A.L.1
Samal, S.K.2
Subramanian, K.3
Prasad, B.V.4
-
81
-
-
0141632878
-
Herpesvirus entry: an update
-
Spear P.G., and Longnecker R. Herpesvirus entry: an update. J. Virol. 77 (2003) 10179-10185
-
(2003)
J. Virol.
, vol.77
, pp. 10179-10185
-
-
Spear, P.G.1
Longnecker, R.2
-
82
-
-
0020644618
-
The structure of bacteriophage φ{symbol}6: protease digestion of φ{symbol}6 virions
-
Stitt B.L., and Mindich L. The structure of bacteriophage φ{symbol}6: protease digestion of φ{symbol}6 virions. Virology 127 (1983) 459-462
-
(1983)
Virology
, vol.127
, pp. 459-462
-
-
Stitt, B.L.1
Mindich, L.2
-
83
-
-
0037431315
-
Unique properties of the inner core of bacteriophage φ{symbol}8, a virus with a segmented dsRNA genome
-
Sun Y., Qiao X., Qiao J., Onodera S., and Mindich L. Unique properties of the inner core of bacteriophage φ{symbol}8, a virus with a segmented dsRNA genome. Virology 308 (2003) 354-361
-
(2003)
Virology
, vol.308
, pp. 354-361
-
-
Sun, Y.1
Qiao, X.2
Qiao, J.3
Onodera, S.4
Mindich, L.5
-
84
-
-
1542268891
-
Nonstructural proteins involved in genome packaging and replication of rotaviruses and other members of the Reoviridae
-
Taraporewala Z.F., and Patton J.T. Nonstructural proteins involved in genome packaging and replication of rotaviruses and other members of the Reoviridae. Virus Res. 101 (2004) 57-66
-
(2004)
Virus Res.
, vol.101
, pp. 57-66
-
-
Taraporewala, Z.F.1
Patton, J.T.2
-
85
-
-
0031060329
-
Characterization of the ion channels formed by poliovirus in planar lipid membranes
-
Tosteson M.T., and Chow M. Characterization of the ion channels formed by poliovirus in planar lipid membranes. J. Virol. 71 (1997) 507-511
-
(1997)
J. Virol.
, vol.71
, pp. 507-511
-
-
Tosteson, M.T.1
Chow, M.2
-
86
-
-
0033045991
-
Capsid structure of simian cytomegalovirus from cryoelectron microscopy: evidence for tegument attachment sites
-
Trus B.L., Gibson W., Cheng N., and Steven A.C. Capsid structure of simian cytomegalovirus from cryoelectron microscopy: evidence for tegument attachment sites. J. Virol. 73 (1999) 2181-2192
-
(1999)
J. Virol.
, vol.73
, pp. 2181-2192
-
-
Trus, B.L.1
Gibson, W.2
Cheng, N.3
Steven, A.C.4
-
87
-
-
0017183621
-
Comparative properties of bacteriophage φ{symbol}6 and φ{symbol}6 nucleocapsid
-
van Etten J., Lane L., Gonzalez C., Partridge J., and Vidaver A. Comparative properties of bacteriophage φ{symbol}6 and φ{symbol}6 nucleocapsid. J. Virol. 18 (1976) 652-658
-
(1976)
J. Virol.
, vol.18
, pp. 652-658
-
-
van Etten, J.1
Lane, L.2
Gonzalez, C.3
Partridge, J.4
Vidaver, A.5
-
88
-
-
0015876365
-
Bacteriophage φ{symbol}6: a lipid-containing virus of Pseudomonas phaseolicola
-
Vidaver A.K., Koski R.K., and Van Etten J.L. Bacteriophage φ{symbol}6: a lipid-containing virus of Pseudomonas phaseolicola. J. Virol. 11 (1973) 799-805
-
(1973)
J. Virol.
, vol.11
, pp. 799-805
-
-
Vidaver, A.K.1
Koski, R.K.2
Van Etten, J.L.3
-
90
-
-
0034767585
-
Comparison of polymerase subunits from double-stranded RNA bacteriophages
-
Yang H., Makeyev E.V., and Bamford D.H. Comparison of polymerase subunits from double-stranded RNA bacteriophages. J. Virol. 75 (2001) 11088-11095
-
(2001)
J. Virol.
, vol.75
, pp. 11088-11095
-
-
Yang, H.1
Makeyev, E.V.2
Bamford, D.H.3
-
91
-
-
0037225770
-
Two distinct mechanisms ensure transcriptional polarity in double-stranded RNA bacteriophages
-
Yang H., Makeyev E.V., Butcher S.J., Gaidelyte A., and Bamford D.H. Two distinct mechanisms ensure transcriptional polarity in double-stranded RNA bacteriophages. J. Virol. 77 (2003) 1195-1203
-
(2003)
J. Virol.
, vol.77
, pp. 1195-1203
-
-
Yang, H.1
Makeyev, E.V.2
Butcher, S.J.3
Gaidelyte, A.4
Bamford, D.H.5
-
92
-
-
0028804828
-
Assembly of VP26 in herpes simplex virus-1 inferred from structures of wild-type and recombinant capsids
-
Zhou Z.H., He J., Jakana J., Tatman J.D., Rixon F.J., and Chiu W. Assembly of VP26 in herpes simplex virus-1 inferred from structures of wild-type and recombinant capsids. Nat. Struct. Biol. 2 (1995) 1026-1030
-
(1995)
Nat. Struct. Biol.
, vol.2
, pp. 1026-1030
-
-
Zhou, Z.H.1
He, J.2
Jakana, J.3
Tatman, J.D.4
Rixon, F.J.5
Chiu, W.6
-
93
-
-
0345471494
-
Visualization of tegument-capsid interactions and DNA in intact herpes simplex virus type 1 virions
-
Zhou Z.H., Chen D.H., Jakana J., Rixon F.J., and Chiu W. Visualization of tegument-capsid interactions and DNA in intact herpes simplex virus type 1 virions. J. Virol. 73 (1999) 3210-3218
-
(1999)
J. Virol.
, vol.73
, pp. 3210-3218
-
-
Zhou, Z.H.1
Chen, D.H.2
Jakana, J.3
Rixon, F.J.4
Chiu, W.5
|