-
1
-
-
33644656793
-
Systematic identification of functional orthologs based on protein network comparison
-
Bandyopadhyay,S. et al. (2006) Systematic identification of functional orthologs based on protein network comparison. Genome Res., 16, 428-435.
-
(2006)
Genome Res.
, vol.16
, pp. 428-435
-
-
Bandyopadhyay, S.1
-
2
-
-
12444301754
-
Structure and evolution of protein interaction networks: A statistical model for link dynamics and gene duplications
-
Berg,J. et al. (2004) Structure and evolution of protein interaction networks: A statistical model for link dynamics and gene duplications. BMC Evol. Biol., 4, 51.
-
(2004)
BMC Evol. Biol.
, vol.4
, pp. 51
-
-
Berg, J.1
-
3
-
-
0037482108
-
Assessment of the reliability of protein-protein interactions and protein function prediction
-
Deng,M. et al. (2003) Assessment of the reliability of protein-protein interactions and protein function prediction. Pac. Symp. Biocomput., 140-151.
-
(2003)
Pac. Symp. Biocomput.
, pp. 140-151
-
-
Deng, M.1
-
4
-
-
0037050026
-
Functional organization of the yeast proteome by systematic analysis of protein complexes
-
Gavin,A.C. et al. (2002) Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature, 415, 141-147.
-
(2002)
Nature
, vol.415
, pp. 141-147
-
-
Gavin, A.C.1
-
5
-
-
33846705591
-
An improved statistic for detecting over-represented gene orthology annotations in gene sets
-
Grossmann,S. et al. (2006) An improved statistic for detecting over-represented gene orthology annotations in gene sets. Proc. RECOMB.
-
(2006)
Proc. RECOMB
-
-
Grossmann, S.1
-
6
-
-
0037050004
-
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
-
Ho,Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature, 415, 180-183.
-
(2002)
Nature
, vol.415
, pp. 180-183
-
-
Ho, Y.1
-
7
-
-
0010656061
-
Exploring the protein interactome using comprehensive two-hybrid projects
-
Ito,T. et al. (2001a) Exploring the protein interactome using comprehensive two-hybrid projects. Trends Biotechnol., 19 (Suppl. 10), 23-27.
-
(2001)
Trends Biotechnol.
, vol.19
, Issue.SUPPL. 10
, pp. 23-27
-
-
Ito, T.1
-
8
-
-
0035836765
-
A comprehensive two-hybrid analysis to explore the yeast protein interactome
-
Ito,T. et al. (2001b) A comprehensive two-hybrid analysis to explore the yeast protein interactome. Proc. Natl Acad. Sci. USA, 98, 4569-4574.
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 4569-4574
-
-
Ito, T.1
-
9
-
-
0141593601
-
Conserved pathways within bacteria and yeast as revealed by global protein network alignment
-
Kelley,B.P. et al. (2003) Conserved pathways within bacteria and yeast as revealed by global protein network alignment. Proc. Natl Acad. Sci. USA, 100, 11394-11399.
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 11394-11399
-
-
Kelley, B.P.1
-
10
-
-
33645985807
-
Pairwise alignment of protein interaction networks
-
Koyuturk,M. et al. (2005) Pairwise alignment of protein interaction networks. J. Comput. Biol., 13, 182-199.
-
(2005)
J. Comput. Biol.
, vol.13
, pp. 182-199
-
-
Koyuturk, M.1
-
11
-
-
0034923505
-
Analysis of proteins and proteomes by mass spectrometry
-
Mann,M. et al. (2001) Analysis of proteins and proteomes by mass spectrometry. Annu. Rev. Biochem., 70, 437-473.
-
(2001)
Annu. Rev. Biochem.
, vol.70
, pp. 437-473
-
-
Mann, M.1
-
12
-
-
0035211290
-
Identification of potential interaction networks using sequence-based searches for conserved protein-protein interactions or 'interologs'
-
Matthews,L.R. et al. (2001) Identification of potential interaction networks using sequence-based searches for conserved protein-protein interactions or 'interologs'. Genome Res., 11, 2120-2126.
-
(2001)
Genome Res.
, vol.11
, pp. 2120-2126
-
-
Matthews, L.R.1
-
13
-
-
0035861990
-
Automatic clustering of orthologs and in-paralogs from pair-wise species comparisons
-
Remm,M. et al. (2001) Automatic clustering of orthologs and in-paralogs from pair-wise species comparisons. Mol. Biol., 314, 1041-1052.
-
(2001)
Mol. Biol.
, vol.314
, pp. 1041-1052
-
-
Remm, M.1
-
14
-
-
27144530248
-
Towards a proteome-scale map of the human protein-protein interaction network
-
Raul,J.F. et al. (2005) Towards a proteome-scale map of the human protein-protein interaction network. Nature, 437, 1173-1178.
-
(2005)
Nature
, vol.437
, pp. 1173-1178
-
-
Raul, J.F.1
-
15
-
-
23844447959
-
Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data
-
Sharan,R. et al. (2004) Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data. J. Comput. Biol., 12, 835-846.
-
(2004)
J. Comput. Biol.
, vol.12
, pp. 835-846
-
-
Sharan, R.1
-
16
-
-
13844314048
-
Conserved patterns of protein interaction in multiple species
-
Sharan,R. et al. (2005) Conserved patterns of protein interaction in multiple species. Proc. Natl Acad. Sci. USA., 102, 1974-1979.
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 1974-1979
-
-
Sharan, R.1
-
17
-
-
25144498379
-
A human protein-protein interaction network: A resource for annotating the proteome
-
Stelzl,U. et al. (2005) A human protein-protein interaction network: A resource for annotating the proteome. Cell, 122, 957-968.
-
(2005)
Cell
, vol.122
, pp. 957-968
-
-
Stelzl, U.1
-
18
-
-
0034069495
-
The Gene Ontology Consortium Gene ontology: Tool for the unification of biology
-
The Gene Ontology Consortium (2000), Gene ontology: Tool for the unification of biology. Nat. Genet., 25, 25-29.
-
(2000)
Nat. Genet.
, vol.25
, pp. 25-29
-
-
-
19
-
-
0034628508
-
A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
-
Uetz,P. et al. (2000) A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae. Nature, 403, 623-627.
-
(2000)
Nature
, vol.403
, pp. 623-627
-
-
Uetz, P.1
-
20
-
-
0034943378
-
The yeast protein interaction network evolves rapidly and contains few redundant duplicate genes
-
Wagner,A. (2001) The yeast protein interaction network evolves rapidly and contains few redundant duplicate genes. Mol. Biol. Evol., 18, 1283-1292.
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 1283-1292
-
-
Wagner, A.1
|