-
1
-
-
19944433119
-
Global analysis of RAR-responsive genes in the Xenopus neurula using cDNA microarrays
-
Arima K., Shiotsugu J., Niu R., Khandpur R., Martinez M., Shin Y., Koide T., Cho K.W., Kitayama A., Ueno N., Chandraratna R.A., and Blumberg B. Global analysis of RAR-responsive genes in the Xenopus neurula using cDNA microarrays. Dev. Dyn. 232 (2005) 414-431
-
(2005)
Dev. Dyn.
, vol.232
, pp. 414-431
-
-
Arima, K.1
Shiotsugu, J.2
Niu, R.3
Khandpur, R.4
Martinez, M.5
Shin, Y.6
Koide, T.7
Cho, K.W.8
Kitayama, A.9
Ueno, N.10
Chandraratna, R.A.11
Blumberg, B.12
-
2
-
-
0004270170
-
-
Wiley and Sons, New York
-
Ausubel F.M., Brent R., Kingston R.E., Moore D.D., Seidman J.G., Smith J.A., and Struhl K. Current Protocols in Molecular Biology (1997), Wiley and Sons, New York
-
(1997)
Current Protocols in Molecular Biology
-
-
Ausubel, F.M.1
Brent, R.2
Kingston, R.E.3
Moore, D.D.4
Seidman, J.G.5
Smith, J.A.6
Struhl, K.7
-
3
-
-
0036847229
-
Gene expression regulation by retinoic acid
-
Balmer J.E., and Blomhoff R. Gene expression regulation by retinoic acid. J. Lipid. Res. 43 (2002) 1773-1808
-
(2002)
J. Lipid. Res.
, vol.43
, pp. 1773-1808
-
-
Balmer, J.E.1
Blomhoff, R.2
-
4
-
-
0030960992
-
Small open reading frames: beautiful needles in the haystack
-
Basrai M.A., Hieter P., and Boeke J.D. Small open reading frames: beautiful needles in the haystack. Genome Res. 7 (1997) 768-771
-
(1997)
Genome Res.
, vol.7
, pp. 768-771
-
-
Basrai, M.A.1
Hieter, P.2
Boeke, J.D.3
-
5
-
-
0017691821
-
Spermatogenic cells of the prepuberal mouse: isolation and morphological characterization
-
Bellvé A.R., Cavicchia J.C., Millette C.F., O'Brien D.A., Bhatnagar Y.M., and Dym M. Spermatogenic cells of the prepuberal mouse: isolation and morphological characterization. J. Cell Biol. 74 (1977) 68-85
-
(1977)
J. Cell Biol.
, vol.74
, pp. 68-85
-
-
Bellvé, A.R.1
Cavicchia, J.C.2
Millette, C.F.3
O'Brien, D.A.4
Bhatnagar, Y.M.5
Dym, M.6
-
6
-
-
28844443172
-
Genome annotation past, present, and future: how to define an ORF at each locus
-
Brent M.R. Genome annotation past, present, and future: how to define an ORF at each locus. Genome Res. 15 (2005) 1777-1786
-
(2005)
Genome Res.
, vol.15
, pp. 1777-1786
-
-
Brent, M.R.1
-
7
-
-
10744226888
-
Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs
-
Cawley S., Bekiranov S., Ng H.H., Kapranov P., Sekinger E.A., Kampa D., Piccolboni A., Sementchenko V., Cheng J., Williams A.J., Wheeler R., Wong B., Drenkow J., Yamanaka M., Patel S., Brubaker S., Tammana H., Helt G., Struhl K., and Gingeras T.R. Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs. Cell 116 (2004) 499-509
-
(2004)
Cell
, vol.116
, pp. 499-509
-
-
Cawley, S.1
Bekiranov, S.2
Ng, H.H.3
Kapranov, P.4
Sekinger, E.A.5
Kampa, D.6
Piccolboni, A.7
Sementchenko, V.8
Cheng, J.9
Williams, A.J.10
Wheeler, R.11
Wong, B.12
Drenkow, J.13
Yamanaka, M.14
Patel, S.15
Brubaker, S.16
Tammana, H.17
Helt, G.18
Struhl, K.19
Gingeras, T.R.20
more..
-
8
-
-
3342911557
-
Role of retinoid signaling in the regulation of spermatogenesis
-
Chung S.S., and Wolgemuth D.J. Role of retinoid signaling in the regulation of spermatogenesis. Cytogenet. Genome Res. 105 (2004) 189-202
-
(2004)
Cytogenet. Genome Res.
, vol.105
, pp. 189-202
-
-
Chung, S.S.1
Wolgemuth, D.J.2
-
9
-
-
0036029643
-
The role of vitamin A in mammalian reproduction and embryonic development
-
Clagett-Dame M., and DeLuca H.F. The role of vitamin A in mammalian reproduction and embryonic development. Annu. Rev. Nutr. 22 (2002) 347-381
-
(2002)
Annu. Rev. Nutr.
, vol.22
, pp. 347-381
-
-
Clagett-Dame, M.1
DeLuca, H.F.2
-
10
-
-
0036048693
-
Retinoids and cardiovascular developmental defects
-
Colbert M.C. Retinoids and cardiovascular developmental defects. Cardiovasc. Toxicol. 2 (2002) 25-39
-
(2002)
Cardiovasc. Toxicol.
, vol.2
, pp. 25-39
-
-
Colbert, M.C.1
-
11
-
-
1842457037
-
Microarray analysis of retinoid-dependent gene activity during rat embryogenesis: increased collagen fibril production in a model of retinoid insufficiency
-
Flentke G.R., Baker M.W., Docterman K.E., Power S., Lough J., and Smith S.M. Microarray analysis of retinoid-dependent gene activity during rat embryogenesis: increased collagen fibril production in a model of retinoid insufficiency. Dev. Dyn. 229 (2004) 886-898
-
(2004)
Dev. Dyn.
, vol.229
, pp. 886-898
-
-
Flentke, G.R.1
Baker, M.W.2
Docterman, K.E.3
Power, S.4
Lough, J.5
Smith, S.M.6
-
12
-
-
10344249950
-
Conservation of Bmp2 post-transcriptional regulatory mechanisms
-
Fritz D.T., Liu D., Xu J., Jiang S., and Rogers M.B. Conservation of Bmp2 post-transcriptional regulatory mechanisms. J. Biol. Chem. 279 (2004) 48950-48958
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 48950-48958
-
-
Fritz, D.T.1
Liu, D.2
Xu, J.3
Jiang, S.4
Rogers, M.B.5
-
13
-
-
33745336617
-
A germline-specific class of small RNAs binds mammalian Piwi proteins
-
Girard A., Sachidanandam R., Hannon G.J., and Carmell M.A. A germline-specific class of small RNAs binds mammalian Piwi proteins. Nature 442 (2006) 199-202
-
(2006)
Nature
, vol.442
, pp. 199-202
-
-
Girard, A.1
Sachidanandam, R.2
Hannon, G.J.3
Carmell, M.A.4
-
14
-
-
0037245923
-
Trapping and characterization of novel retinoid response elements
-
Glozak M.A., Li Y., Reuille R., Kim K.H., Vo M.N., and Rogers M.B. Trapping and characterization of novel retinoid response elements. Mol. Endocrinol. 17 (2003) 27-41
-
(2003)
Mol. Endocrinol.
, vol.17
, pp. 27-41
-
-
Glozak, M.A.1
Li, Y.2
Reuille, R.3
Kim, K.H.4
Vo, M.N.5
Rogers, M.B.6
-
15
-
-
0024460039
-
Function of vitamin A in normal and synchronized semeniferous tubules
-
Griswold M.D., Bishop P.D., Kim K.-H., Ping R., Siiteri J.E., and Morales C. Function of vitamin A in normal and synchronized semeniferous tubules. Ann. NY Acad. Sci. 564 (1989) 154-172
-
(1989)
Ann. NY Acad. Sci.
, vol.564
, pp. 154-172
-
-
Griswold, M.D.1
Bishop, P.D.2
Kim, K.-H.3
Ping, R.4
Siiteri, J.E.5
Morales, C.6
-
16
-
-
0027273372
-
An octamer motif contributes to the expression of the retinoic acid-regulated zinc finger gene Rex-1 (Zfp-42) in F9 teratocarcinoma cells
-
Hosler B., Rogers M., Kozak C., and Gudas L. An octamer motif contributes to the expression of the retinoic acid-regulated zinc finger gene Rex-1 (Zfp-42) in F9 teratocarcinoma cells. Mol. Cell Biol. 13 (1993) 2919-2928
-
(1993)
Mol. Cell Biol.
, vol.13
, pp. 2919-2928
-
-
Hosler, B.1
Rogers, M.2
Kozak, C.3
Gudas, L.4
-
17
-
-
0025247836
-
Role of spermatogonia in the stage-synchronization of the seminiferous epithelium in vitamin-A-deficient rats
-
Ismail N., Morales C., and Clermont Y. Role of spermatogonia in the stage-synchronization of the seminiferous epithelium in vitamin-A-deficient rats. Am. J. Anat. 188 (1990) 57-63
-
(1990)
Am. J. Anat.
, vol.188
, pp. 57-63
-
-
Ismail, N.1
Morales, C.2
Clermont, Y.3
-
18
-
-
0029584593
-
Nonsteroid nuclear receptors: what are genetic studies telling us about their role in real life?
-
Kastner P., Mark M., and Chambon P. Nonsteroid nuclear receptors: what are genetic studies telling us about their role in real life?. Cell 83 (1995) 859-869
-
(1995)
Cell
, vol.83
, pp. 859-869
-
-
Kastner, P.1
Mark, M.2
Chambon, P.3
-
19
-
-
24644472515
-
Antisense transcription in the mammalian transcriptome
-
Katayama S., Tomaru Y., Kasukawa T., Waki K., Nakanishi M., Nakamura M., Nishida H., Yap C.C., Suzuki M., Kawai J., Suzuki H., Carninci P., Hayashizaki Y., Wells C., Frith M., Ravasi T., Pang K.C., Hallinan J., Mattick J., Hume D.A., Lipovich L., Batalov S., Engstrom P.G., Mizuno Y., Faghihi M.A., Sandelin A., Chalk A.M., Mottagui-Tabar S., Liang Z., Lenhard B., and Wahlestedt C. Antisense transcription in the mammalian transcriptome. Science 309 (2005) 1564-1566
-
(2005)
Science
, vol.309
, pp. 1564-1566
-
-
Katayama, S.1
Tomaru, Y.2
Kasukawa, T.3
Waki, K.4
Nakanishi, M.5
Nakamura, M.6
Nishida, H.7
Yap, C.C.8
Suzuki, M.9
Kawai, J.10
Suzuki, H.11
Carninci, P.12
Hayashizaki, Y.13
Wells, C.14
Frith, M.15
Ravasi, T.16
Pang, K.C.17
Hallinan, J.18
Mattick, J.19
Hume, D.A.20
Lipovich, L.21
Batalov, S.22
Engstrom, P.G.23
Mizuno, Y.24
Faghihi, M.A.25
Sandelin, A.26
Chalk, A.M.27
Mottagui-Tabar, S.28
Liang, Z.29
Lenhard, B.30
Wahlestedt, C.31
more..
-
21
-
-
0025646185
-
The regulation of retinoic acid receptor mRNA Levels during spermatogenesis
-
Kim K.H., and Griswold M.D. The regulation of retinoic acid receptor mRNA Levels during spermatogenesis. Molec. Endocrin. 4 (1990) 1679-1688
-
(1990)
Molec. Endocrin.
, vol.4
, pp. 1679-1688
-
-
Kim, K.H.1
Griswold, M.D.2
-
22
-
-
0000879126
-
Spermiogenesis of rat, mouse, hamster and guinea pig as revealed by the periodic acid-fuchsin sulfurous acid technique
-
Leblond C.P., and Clermont Y. Spermiogenesis of rat, mouse, hamster and guinea pig as revealed by the periodic acid-fuchsin sulfurous acid technique. Am. J. Anat. 90 (1952) 167-215
-
(1952)
Am. J. Anat.
, vol.90
, pp. 167-215
-
-
Leblond, C.P.1
Clermont, Y.2
-
23
-
-
28844503063
-
Disruption of the lecithin:retinol acyltransferase gene makes mice more susceptible to vitamin A deficiency
-
Liu L., and Gudas L.J. Disruption of the lecithin:retinol acyltransferase gene makes mice more susceptible to vitamin A deficiency. J. Biol. Chem. 280 (2005) 40226-40234
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 40226-40234
-
-
Liu, L.1
Gudas, L.J.2
-
24
-
-
0035710746
-
Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method
-
Livak K.J., and Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 25 (2001) 402-408
-
(2001)
Methods
, vol.25
, pp. 402-408
-
-
Livak, K.J.1
Schmittgen, T.D.2
-
25
-
-
14744303696
-
Expanding functional diversity of the coactivators
-
Lonard D.M., and O'Malley B.W. Expanding functional diversity of the coactivators. Trends Biochem. Sci. 30 (2005) 126-132
-
(2005)
Trends Biochem. Sci.
, vol.30
, pp. 126-132
-
-
Lonard, D.M.1
O'Malley, B.W.2
-
26
-
-
0027257997
-
High postnatal lethality and testis degeneration in retinoic acid receptor alpha mutant mice
-
Lufkin T., Lohnes D., Mark M., Dierich A., Gorry P., Gaub M.P., LeMeur M., and Chambon P. High postnatal lethality and testis degeneration in retinoic acid receptor alpha mutant mice. Proc. Natl. Acad. Sci. USA 90 (1993) 7225-7229
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 7225-7229
-
-
Lufkin, T.1
Lohnes, D.2
Mark, M.3
Dierich, A.4
Gorry, P.5
Gaub, M.P.6
LeMeur, M.7
Chambon, P.8
-
27
-
-
0000530241
-
The retinoid receptors
-
Sporn M., et al. (Ed), Raven Press, Ltd., New York
-
Mangelsdorf D.J., Umesano K., and Evans R.M. The retinoid receptors. In: Sporn M., et al. (Ed). The Retinoids: Biology, Chemistry, and Medicine vol. 2d (1994), Raven Press, Ltd., New York 319-349
-
(1994)
The Retinoids: Biology, Chemistry, and Medicine
, vol.2 d
, pp. 319-349
-
-
Mangelsdorf, D.J.1
Umesano, K.2
Evans, R.M.3
-
28
-
-
24644443227
-
The functional genomics of noncoding RNA
-
Mattick J.S. The functional genomics of noncoding RNA. Science 309 (2005) 1527-1528
-
(2005)
Science
, vol.309
, pp. 1527-1528
-
-
Mattick, J.S.1
-
29
-
-
0037154974
-
Combinatorial control of gene expression by nuclear receptors and coregulators
-
McKenna N.J., and O'Malley B.W. Combinatorial control of gene expression by nuclear receptors and coregulators. Cell 108 (2002) 465-474
-
(2002)
Cell
, vol.108
, pp. 465-474
-
-
McKenna, N.J.1
O'Malley, B.W.2
-
30
-
-
0023269868
-
Retinol-induced stage synchronization in seminiferous tubules of the rat
-
Morales C., and Griswold M.D. Retinol-induced stage synchronization in seminiferous tubules of the rat. Endocrinology 121 (1987) 432-434
-
(1987)
Endocrinology
, vol.121
, pp. 432-434
-
-
Morales, C.1
Griswold, M.D.2
-
31
-
-
77049264222
-
A description of spermiogenesis in the mouse and its use in analysis of the cycle of the seminiferous epithelium and germ cell renewal
-
Oakberg E.F. A description of spermiogenesis in the mouse and its use in analysis of the cycle of the seminiferous epithelium and germ cell renewal. Am. J. Anat. 99 (1956) 391-413
-
(1956)
Am. J. Anat.
, vol.99
, pp. 391-413
-
-
Oakberg, E.F.1
-
32
-
-
27444438178
-
Retinoid absorption and storage is impaired in mice lacking lecithin:retinol acyltransferase (LRAT)
-
O'Byrne S.M., Wongsiriroj N., Libien J., Vogel S., Goldberg I.J., Baehr W., Palczewski K., and Blaner W.S. Retinoid absorption and storage is impaired in mice lacking lecithin:retinol acyltransferase (LRAT). J. Biol. Chem. 280 (2005) 35647-35657
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 35647-35657
-
-
O'Byrne, S.M.1
Wongsiriroj, N.2
Libien, J.3
Vogel, S.4
Goldberg, I.J.5
Baehr, W.6
Palczewski, K.7
Blaner, W.S.8
-
33
-
-
0026482460
-
Expression of Pax-3- and neuroectoderm-inducing activities during differentiation of P19 embryonal carcinoma cells
-
Pruitt S.C. Expression of Pax-3- and neuroectoderm-inducing activities during differentiation of P19 embryonal carcinoma cells. Development 116 (1992) 573-583
-
(1992)
Development
, vol.116
, pp. 573-583
-
-
Pruitt, S.C.1
-
34
-
-
33745623951
-
Structural biology: RNA switches function
-
Reichow S., and Varani G. Structural biology: RNA switches function. Nature 441 (2006) 1054-1055
-
(2006)
Nature
, vol.441
, pp. 1054-1055
-
-
Reichow, S.1
Varani, G.2
-
35
-
-
0026070446
-
Specific expression of a retinoic acid-regulated, zinc-finger gene, Rex-1, in preimplantation embryos, trophoblast, and spermatocytes
-
Rogers M.B., Hosler B.A., and Gudas L.J. Specific expression of a retinoic acid-regulated, zinc-finger gene, Rex-1, in preimplantation embryos, trophoblast, and spermatocytes. Devlopement 113 (1991) 815-824
-
(1991)
Devlopement
, vol.113
, pp. 815-824
-
-
Rogers, M.B.1
Hosler, B.A.2
Gudas, L.J.3
-
36
-
-
0027081776
-
Bone morphogenetic proteins-2 and -4 are involved in the retinoic acid-induced differentiation of embryonal carcinoma cells
-
Rogers M.B., Rosen V., Wozney J.M., and Gudas L.J. Bone morphogenetic proteins-2 and -4 are involved in the retinoic acid-induced differentiation of embryonal carcinoma cells. Molec. Biol. Cell 3 (1992) 189-196
-
(1992)
Molec. Biol. Cell
, vol.3
, pp. 189-196
-
-
Rogers, M.B.1
Rosen, V.2
Wozney, J.M.3
Gudas, L.J.4
-
38
-
-
0034852484
-
Identification of differentially expressed genes in mouse development using differential display and in situ hybridization
-
Shen M.M. Identification of differentially expressed genes in mouse development using differential display and in situ hybridization. Methods 24 (2001) 15-27
-
(2001)
Methods
, vol.24
, pp. 15-27
-
-
Shen, M.M.1
-
39
-
-
0037158780
-
-
Shendure, J., Church, G.M. (2002) Computational discovery of sense-antisense transcription in the human and mouse genomes. Genome Biol 3, RESEARCH0044.
-
-
-
-
40
-
-
0024453720
-
Adenovirus VAI-RNA regulates gene expression by controlling stability of ribosome-bound RNAs
-
Strijker R., Fritz D.T., and Levinson A.D. Adenovirus VAI-RNA regulates gene expression by controlling stability of ribosome-bound RNAs. Embo. J. 8 (1989) 2669-2675
-
(1989)
Embo. J.
, vol.8
, pp. 2669-2675
-
-
Strijker, R.1
Fritz, D.T.2
Levinson, A.D.3
-
41
-
-
0034771482
-
Gene expression profile in early stage of retinoic acid-induced differentiation of human SH-SY5Y neuroblastoma cells
-
Truckenmiller M.E., Vawter M.P., Cheadle C., Coggiano M., Donovan D.M., Freed W.J., and Becker K.G. Gene expression profile in early stage of retinoic acid-induced differentiation of human SH-SY5Y neuroblastoma cells. Restor. Neurol. Neurosci. 18 (2001) 67-80
-
(2001)
Restor. Neurol. Neurosci.
, vol.18
, pp. 67-80
-
-
Truckenmiller, M.E.1
Vawter, M.P.2
Cheadle, C.3
Coggiano, M.4
Donovan, D.M.5
Freed, W.J.6
Becker, K.G.7
-
42
-
-
11144286474
-
Large-scale reprogramming of cranial neural crest gene expression by retinoic acid exposure
-
Williams S.S., Mear J.P., Liang H.C., Potter S.S., Aronow B.J., and Colbert M.C. Large-scale reprogramming of cranial neural crest gene expression by retinoic acid exposure. Physiol. Genomics 19 (2004) 184-197
-
(2004)
Physiol. Genomics
, vol.19
, pp. 184-197
-
-
Williams, S.S.1
Mear, J.P.2
Liang, H.C.3
Potter, S.S.4
Aronow, B.J.5
Colbert, M.C.6
-
43
-
-
33745286231
-
TUF love for "junk" DNA
-
Willingham A.T., and Gingeras T.R. TUF love for "junk" DNA. Cell 125 (2006) 1215-1220
-
(2006)
Cell
, vol.125
, pp. 1215-1220
-
-
Willingham, A.T.1
Gingeras, T.R.2
-
44
-
-
24644481406
-
A strategy for probing the function of noncoding RNAs finds a repressor of NFAT
-
Willingham A.T., Orth A.P., Batalov S., Peters E.C., Wen B.G., Aza-Blanc P., Hogenesch J.B., and Schultz P.G. A strategy for probing the function of noncoding RNAs finds a repressor of NFAT. Science 309 (2005) 1570-1573
-
(2005)
Science
, vol.309
, pp. 1570-1573
-
-
Willingham, A.T.1
Orth, A.P.2
Batalov, S.3
Peters, E.C.4
Wen, B.G.5
Aza-Blanc, P.6
Hogenesch, J.B.7
Schultz, P.G.8
-
45
-
-
84989611379
-
Tissue changes following deprivation of fat soluble A vitamin
-
Wolbach S., and Howe P. Tissue changes following deprivation of fat soluble A vitamin. J. Exp. Med. 42 (1925) 753-777
-
(1925)
J. Exp. Med.
, vol.42
, pp. 753-777
-
-
Wolbach, S.1
Howe, P.2
-
46
-
-
21144441198
-
Systems analysis of transcriptome and proteome in retinoic acid/arsenic trioxide-induced cell differentiation/apoptosis of promyelocytic leukemia
-
Zheng P.Z., Wang K.K., Zhang Q.Y., Huang Q.H., Du Y.Z., Zhang Q.H., Xiao D.K., Shen S.H., Imbeaud S., Eveno E., Zhao C.J., Chen Y.L., Fan H.Y., Waxman S., Auffray C., Jin G., Chen S.J., Chen Z., and Zhang J. Systems analysis of transcriptome and proteome in retinoic acid/arsenic trioxide-induced cell differentiation/apoptosis of promyelocytic leukemia. Proc. Natl. Acad. Sci. USA 102 (2005) 7653-7658
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 7653-7658
-
-
Zheng, P.Z.1
Wang, K.K.2
Zhang, Q.Y.3
Huang, Q.H.4
Du, Y.Z.5
Zhang, Q.H.6
Xiao, D.K.7
Shen, S.H.8
Imbeaud, S.9
Eveno, E.10
Zhao, C.J.11
Chen, Y.L.12
Fan, H.Y.13
Waxman, S.14
Auffray, C.15
Jin, G.16
Chen, S.J.17
Chen, Z.18
Zhang, J.19
-
47
-
-
0031937001
-
Vitamin A and embryonic development: an overview
-
Zile M. Vitamin A and embryonic development: an overview. J. Nutr. 128 (1998) 455S-458S
-
(1998)
J. Nutr.
, vol.128
-
-
Zile, M.1
|