The first structure from the SOUL/HBP family of heme-binding proteins, murine P22HBP

Journal of Biological Chemistry

Volumn 281, Issue 42, 2006, Pages 31553-31561

  Dias, Jorge S ^a   Macedo, Anjos L ^a   Ferreira, Gloria C ^b   Peterson, Francis C ^c   Volkman, Brian F ^c   Goodfellow, Brian J ^d  

^a DEPARTAMENTO DE QUÍMICA   (Portugal)

^b UNIVERSITY OF SOUTH FLORIDA   (United States)

^c MEDICAL COLLEGE OF WISCONSIN   (United States)

^d UNIVERSITY OF AVEIRO   (Portugal)

Author keywords

[No Author keywords available]

Indexed keywords

LIGANDS; PROTEIN FLUORESCENCE QUENCHING; PROTOPORPHYRIN; RETINA;

BINDING ENERGY; COORDINATION REACTIONS; IRON COMPOUNDS; MOLECULAR STRUCTURE; MONOMERS; TISSUE;

PROTEINS;

BACTERIAL PROTEIN; HEME BINDING PROTEIN; HEMOPROTEIN; HISTIDINE; PROTOPORPHYRIN; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

ALPHA HELIX; ANIMAL CELL; ARTICLE; BINDING SITE; CONTROLLED STUDY; EXPERIMENTAL MOUSE; HEME SYNTHESIS; MOUSE; NONHUMAN; NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN FOLDING; PROTON NUCLEAR MAGNETIC RESONANCE;

AMINO ACID SEQUENCE; ANIMALS; CARRIER PROTEINS; HEME; HEMEPROTEINS; HEMIN; HUMANS; MICE; MOLECULAR SEQUENCE DATA; PROTEIN STRUCTURE, SECONDARY; PROTOPORPHYRINS; SEQUENCE HOMOLOGY, AMINO ACID; TETRAPYRROLES;

BACTERIA (MICROORGANISMS); EUKARYOTA; MURINAE;

EID: 33846009114     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M605988200     Document Type: Article

References (36)

1. Goodfellow, B. J., Dias, J. S., Ferreira, G. C., Henklein, P., Wray, V., and Macedo, A. L. (2001) FEBS Lett. 505, 325-331
2. Munakata, H., Sun, J. Y., Yoshida, K., Nakatani, T., Honda, E., Hayakawa, S., Furuyama, K., and Hayashi, N. (2004) J. Biochem. 136, 233-238
3. Blackmon, B. J., Dailey, T. A., Lianchun, X., and Dailey, H. A. (2002) Arch. Biochem. Biophys. 407, 196-201
4. Taketani, S., Adachi, Y., Kohno, H., Ikehara, S., Tokunaga, R., and Ishii, T. (1998) J. Biol. Chem. 273, 31388-31394
5. Babusiak, M., Man, P., Sutak, R., Petrak, J., and Vyoral, D. (2005) Proteomics 5, 340-350
6. Migeotte, I., Riboldi, E., Franssen, J. D., Gregoire, F., Loison, C., Wittamer, V., Detheux, M., Robberecht, P., Costagliola, S., Vassart, G., Sozzani, S., Parmentier, M., and Communi, D. (2005) J. Exp. Med. 201, 83-93
7. Zylka, M. J., and Reppert, S. M. (1999) Brain Res. 74, 175-181
8. Sato, E., Sagami, I., Uchida, T., Sato, A., Kitagawa, T., Igarashi, J., and Shimizu, T. (2004) Biochemistry 43, 14189-14198
9. Dias, J. S., Macedo, A. L., Ferreira, G. C., Jeanty, N., Taketani, S., Goodfellow, B. J., Peterson, F. C., and Volkman, B. F. (2005) J. Biomol. NMR 32, 338
10. Smith, P. K., Krohn, R. I., Hermanson, G. T., Mallia, A. K., Gartner, F. H., Provenzano, M. D., Fujimoto, E. K., Goeke, N. M., Olson, B. J., and Klenk, D. C. (1985) Analyt. Biochem. 150, 76-85
11. Swillens, S. (1995) Mol. Pharmacol. 47, 1197-1203
12. Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J., and Bax, A. (1995) J. Biomol. NMR 6, 277-293
13. Keller, R. (2004) The Computer Aided Resonance Assignment Tutorial, Cantina Verlag, Goldau, Switzerland
14. Bartels, C., Xia, T.-H., Billeter, M., Güntert, P., and Wüthrich, K. (1995) J. Biomol. NMR 5, 1-10
15. Wishart, D. S., Bigam, C. G., Yao, J., Abildgaard, F., Dyson, H. J., Oldfield, E., Markley, J. L., and Sykes, B. D. (1995) J. Biomol. NMR 6, 135-140
16. Cornilescu, G., Delaglio, F., and Bax, A. (1999) J. Biomol. NMR 13, 289-302
17. Herrmann, T., Guntert, P., and Wuthrich, K. (2002) J. Mol. Biol. 319, 209-227
18. Linge, J. P., Williams, M. A., Spronk, C. A., Bonvin, A. M., and Nilges, M. (2003) Proteins 50, 496-506
19. Schwieters, C. D., Kuszewski, J. J., Tjandra, N., and Clore, G. M. (2003) J. Magn. Reson. 160, 65-73
20. Laskowski, R. A., Rullmannn, J. A., MacArthur, M. W., Kaptein, R., and Thornton, J. M. (1996) J. Biomol. NMR 8, 477-486
21. Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J. H., Zhang, Z., Miller, W., and Lipman, D. J. (1997) Nucleic Acids Res. 25, 3389-3402
22. Gibrat, J. F., Madej, T., and Bryant, S. H. (1996) Curr. Opin. Struct. Biol. 6, 377-385
23. Ye, Y., and Godzik, A. (2003) Bioinformatics 19, Suppl. 2, ii246-ii255
24. Baker, N. A., Sept, D., Joseph, S., Holst, M. J., and McCammon, J. A. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 10037-10041
25. Dolinsky, T. J., Nielsen, J. E., McCammon, J. A., and Baker, N. A. (2004) Nucleic Acids Res. 32, W665-W667 (web server issue)
26. Marti-Renom, M. A., Stuart, A. C., Fiser, A., Sanchez, R., Melo, F., and Sali, A. (2000) Annu. Rev. Biophys. Biomol. Struct. 29, 291-325
27. Romanowski, M. J., Gibney, S. A., and Burley, S. K. (2002) Proteins 47, 403-407
28. Kwon, H. J., Bennik, M. H., Demple, B., and Ellenberger, T. (2000) Nat. Struct. Biol. 7, 424-430
29. Zheleznova, E. E., Markham, P. N., Neyfakh, A. A., and Brennan, R. G. (1999) Cell 96, 353-362
30. Newberry, K. J., and Brennan, R. G. (2004) J. Biol. Chem. 279, 20356-20362
31. Wuthrich, K., Shulman, R. G., and Yamane, T. (1968) Proc. Natl. Acad. Sci. U. S. A. 61, 1199-1206
32. Xu, X. P., and Case, D. A. (2001) J. Biomol. NMR 21, 321-333
33. Bertini, I., Luchinat, C., Parigi, G., and Pierattelli, R. (2005) Chembiochem 6, 1536-1549
34. Latunde-Dada, G. O., Simpson, R. J., and McKie, A. T. (2006) Trends Biochem. Sci. 31, 182-188
35. Lathrop, J. T., and Timko, M. P. (1993) Science 259, 522-525
36. Notredame, C., Higgins, D. G., and Heringa, J. (2000) J. Mol. Biol. 302, 205-217