Permeation in gramicidin ion channels by directly estimating the potential of mean force using Brownian dynamics simulations

Journal of Computational and Theoretical Nanoscience

Volumn 3, Issue 5, 2006, Pages 702-711

  Krishnamurthy, Vikram ^a   Hoyles, Matthew ^b   Saab, Rayan ^a   Chung, Shin Ho ^b  

^a UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^b AUSTRALIAN NATIONAL UNIVERSITY   (Australia)

Author keywords

Adaptive control; Brownian dynamics; Gramicidin channels; Ion permeation; Potential of mean force; Stochastic optimization; Stochastic search algorithms

Indexed keywords

ALGORITHMS; BROWNIAN MOVEMENT; COMPUTER SIMULATION; OPTIMIZATION; RANDOM PROCESSES; SENSITIVITY ANALYSIS;

BROWNIAN DYNAMICS; GRAMICIDIN CHANNELS; ION PERMEATION; POTENTIAL OF MEAN FORCE; STOCHASTIC OPTIMIZATION; STOCHASTIC SEARCH ALGORITHMS;

MOLECULAR DYNAMICS;

EID: 33845771781     PISSN: 15461955     EISSN: None     Source Type: Journal    
DOI: 10.1166/jctn.2006.010     Document Type: Conference Paper

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