-
1
-
-
17644371012
-
Comparison of the transcript profiles from the root and the nodulating root of the model legume Lotus japonicus by Serial Analysis of Gene Expression
-
Asamizu, E., Nakamura, Y., Sato, S. and Tabata, S. (2005) Comparison of the transcript profiles from the root and the nodulating root of the model legume Lotus japonicus by Serial Analysis of Gene Expression. Mol. Plant-Microbe Interact. 18, 487-498.
-
(2005)
Mol. Plant-Microbe Interact.
, vol.18
, pp. 487-498
-
-
Asamizu, E.1
Nakamura, Y.2
Sato, S.3
Tabata, S.4
-
2
-
-
0030681260
-
The significance of digital gene expression profiles
-
Audic, S. and Claverie, J.M. (1997) The significance of digital gene expression profiles. Genome Res. 7, 986-995.
-
(1997)
Genome Res.
, vol.7
, pp. 986-995
-
-
Audic, S.1
Claverie, J.M.2
-
3
-
-
33645531789
-
A high throughput Agrobacterium tumefaciens-mediated transformation method for functional genomics of perennial ryegrass (Lolium perenne L.)
-
Bajaj, S., Ran, Y., Phillips, J., Kulrajathevan, G., Pal, S., Cohen, D., Elborough, K. and Sathish, P. (2006) A high throughput Agrobacterium tumefaciens-mediated transformation method for functional genomics of perennial ryegrass (Lolium perenne L.). Plant Cell Rep. 25, 651-659.
-
(2006)
Plant Cell Rep.
, vol.25
, pp. 651-659
-
-
Bajaj, S.1
Ran, Y.2
Phillips, J.3
Kulrajathevan, G.4
Pal, S.5
Cohen, D.6
Elborough, K.7
Sathish, P.8
-
4
-
-
13444304325
-
NCBI GEO: Mining millions of expression profiles - Database and tools
-
Barrett, T., Suzek, T.O., Troup, D.B., Wilhite, S.E., Ngau, W.C., Ledoux, P., Rudnev, D., Lash, A.E., Fujibuchi, W. and Edgar, R. (2005) NCBI GEO: mining millions of expression profiles - database and tools. Nucleic Acids Res. 33, Database Issue: D562-D566.
-
(2005)
Nucleic Acids Res.
, vol.33
, Issue.DATABASE ISSUE
-
-
Barrett, T.1
Suzek, T.O.2
Troup, D.B.3
Wilhite, S.E.4
Ngau, W.C.5
Ledoux, P.6
Rudnev, D.7
Lash, A.E.8
Fujibuchi, W.9
Edgar, R.10
-
5
-
-
20044382805
-
Sorghum genome sequencing by methylation filtration
-
Bedell, J.A., Budiman, M.A., Nunberg, A., Citek, R.W., Robbins, D., Jones, J., Flick, E., Rholfing, T., Fries, J., Bradford, K., McMenamy, J., Smith, M., Holeman, H., Roe, B.A., Wiley, G., Korf, I.F., Rabinowicz, P.D., Lakey, N., McCombie, W.R., Jeddeloh, J.A. and Martienssen, R.A. (2005) Sorghum genome sequencing by methylation filtration. PLoS Biol. 3, e13.
-
(2005)
PLoS Biol.
, vol.3
-
-
Bedell, J.A.1
Budiman, M.A.2
Nunberg, A.3
Citek, R.W.4
Robbins, D.5
Jones, J.6
Flick, E.7
Rholfing, T.8
Fries, J.9
Bradford, K.10
McMenamy, J.11
Smith, M.12
Holeman, H.13
Roe, B.A.14
Wiley, G.15
Korf, I.F.16
Rabinowicz, P.D.17
Lakey, N.18
McCombie, W.R.19
Jeddeloh, J.A.20
Martienssen, R.A.21
more..
-
7
-
-
0033869323
-
Comparative sequence analysis of plant nuclear genomes: Microcolinearity and its many exceptions
-
Bennetzen, J.L. (2000) Comparative sequence analysis of plant nuclear genomes: microcolinearity and its many exceptions. Plant Cell, 12, 1021-1030.
-
(2000)
Plant Cell
, vol.12
, pp. 1021-1030
-
-
Bennetzen, J.L.1
-
8
-
-
0030932665
-
The unified grass genome: Synergy in synteny
-
Bennetzen, J.L. and Freeling, M. (1997) The unified grass genome: synergy in synteny. Genome Res. 7, 301-306.
-
(1997)
Genome Res.
, vol.7
, pp. 301-306
-
-
Bennetzen, J.L.1
Freeling, M.2
-
9
-
-
6944240070
-
A comparative analysis of transcribed genes in the mouse hypothalamus and neocortex reveals chromosomal clustering
-
Boon, W.-M., Beissbarth, T., Hyde, L., Smyth, G., Gunnersen, J., Denton, D.A., Scott, H. and Tan, S.-S. (2004) A comparative analysis of transcribed genes in the mouse hypothalamus and neocortex reveals chromosomal clustering. Proc. Natl. Acad. Sci. USA, 101, 14 972-14 977.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 14972-14977
-
-
Boon, W.-M.1
Beissbarth, T.2
Hyde, L.3
Smyth, G.4
Gunnersen, J.5
Denton, D.A.6
Scott, H.7
Tan, S.-S.8
-
10
-
-
0037986744
-
Expression profiling and bioinformatic analyses of a novel stress-regulated multispanning transmembrane protein family from cereals and Arabidopsis
-
Breton, G., Danyluk, J., Charron, J.-B.F. and Sarhan, F. (2003) Expression profiling and bioinformatic analyses of a novel stress-regulated multispanning transmembrane protein family from cereals and Arabidopsis. Plant Physiol. 132, 64-74.
-
(2003)
Plant Physiol.
, vol.132
, pp. 64-74
-
-
Breton, G.1
Danyluk, J.2
Charron, J.-B.F.3
Sarhan, F.4
-
11
-
-
32544436414
-
Structural variation and evolution of a defense-gene cluster in natural populations of Aegilops tauschii
-
Brooks, S., Huang, L., Herbel, M., Gill, B., Brown-Guedira, G. and Fellers, J. (2006) Structural variation and evolution of a defense-gene cluster in natural populations of Aegilops tauschii. Theor. Appl. Genet. 112, 618-626.
-
(2006)
Theor. Appl. Genet.
, vol.112
, pp. 618-626
-
-
Brooks, S.1
Huang, L.2
Herbel, M.3
Gill, B.4
Brown-Guedira, G.5
Fellers, J.6
-
12
-
-
0031770592
-
Accumulation of an acidic dehydrin in the vicinity of the plasma membrane during cold acclimation of wheat
-
Danyluk, J., Perron, A., Houde, M., Limin, A., Fowler, B., Benhamou, N. and Sarhan, F. (1998) Accumulation of an acidic dehydrin in the vicinity of the plasma membrane during cold acclimation of wheat. Plant Cell, 10, 623-638.
-
(1998)
Plant Cell
, vol.10
, pp. 623-638
-
-
Danyluk, J.1
Perron, A.2
Houde, M.3
Limin, A.4
Fowler, B.5
Benhamou, N.6
Sarhan, F.7
-
13
-
-
1942501588
-
Enhanced translation of a chloroplast-expressed RbcS gene restores small subunit levels and photosynthesis in nuclear RbcS antisense plants
-
Dhingra, A., Portis, A.R. Jr and Daniell, H. (2004) Enhanced translation of a chloroplast-expressed RbcS gene restores small subunit levels and photosynthesis in nuclear RbcS antisense plants. Proc. Natl. Acad. Sci. 101, 6315-6320.
-
(2004)
Proc. Natl. Acad. Sci.
, vol.101
, pp. 6315-6320
-
-
Dhingra, A.1
Portis Jr., A.R.2
Daniell, H.3
-
14
-
-
0035656688
-
Non-coding RNA genes and the modern RNA world
-
Eddy, S.R. (2001) Non-coding RNA genes and the modern RNA world. Nat. Rev. Genet. 2, 919-929.
-
(2001)
Nat. Rev. Genet.
, vol.2
, pp. 919-929
-
-
Eddy, S.R.1
-
15
-
-
0002230464
-
The relation between nuclear DNA amount and the duration of the mitotic cycle
-
Evans, G.M., Rees, H., Snell, C.L. and Sun, S. (1972) The relation between nuclear DNA amount and the duration of the mitotic cycle. Chrom. Today, 3, 24-31.
-
(1972)
Chrom. Today
, vol.3
, pp. 24-31
-
-
Evans, G.M.1
Rees, H.2
Snell, C.L.3
Sun, S.4
-
16
-
-
1642563198
-
Global transcript analysis of rice leaf and seed using SAGE™ technology
-
Gibbings, J.G., Cook, B.P., Dufault, M.R., Madden, S.L., Khuri, S., Turnbull, C.J. and Dunwell, J.M. (2003) Global transcript analysis of rice leaf and seed using SAGE™ technology. Plant Biotechnol. J. 1, 271-285.
-
(2003)
Plant Biotechnol. J.
, vol.1
, pp. 271-285
-
-
Gibbings, J.G.1
Cook, B.P.2
Dufault, M.R.3
Madden, S.L.4
Khuri, S.5
Turnbull, C.J.6
Dunwell, J.M.7
-
17
-
-
33344470688
-
Structure and architecture of the maize genome
-
Haberer, G., Young, S., Bharti, A.K., Gundlach, H., Raymond, C., Fuks, G., Butler, E., Wing, R.A., Rounsley, S., Birren, B., Nusbaum, C., Mayer, K.F.S. and Messing, J. (2005) Structure and architecture of the maize genome. Plant Physiol. 139, 1612-1624.
-
(2005)
Plant Physiol.
, vol.139
, pp. 1612-1624
-
-
Haberer, G.1
Young, S.2
Bharti, A.K.3
Gundlach, H.4
Raymond, C.5
Fuks, G.6
Butler, E.7
Wing, R.A.8
Rounsley, S.9
Birren, B.10
Nusbaum, C.11
Mayer, K.F.S.12
Messing, J.13
-
18
-
-
30344449159
-
Temperature acclimation of photosynthesis: Mechanisms involved in the changes in temperature dependence of photosynthetic rate
-
Hikosaka, K., Ishikawa, K., Borjigidai, A., Muller, O. and Onoda, Y. (2006) Temperature acclimation of photosynthesis: mechanisms involved in the changes in temperature dependence of photosynthetic rate. J. Exp. Bot. 57, 291-302.
-
(2006)
J. Exp. Bot.
, vol.57
, pp. 291-302
-
-
Hikosaka, K.1
Ishikawa, K.2
Borjigidai, A.3
Muller, O.4
Onoda, Y.5
-
19
-
-
0026891037
-
The heat shock response of pollen and other tissues of maize
-
Hopf, N., Plesofsky-Vig, N. and Brambl, R. (1992) The heat shock response of pollen and other tissues of maize. Plant Mol. Biol. 19, 623-630.
-
(1992)
Plant Mol. Biol.
, vol.19
, pp. 623-630
-
-
Hopf, N.1
Plesofsky-Vig, N.2
Brambl, R.3
-
20
-
-
0030050597
-
The molecular biology of plant acclimation to low temperature
-
Hughes, M.A. and Dunn, M.A. (1996) The molecular biology of plant acclimation to low temperature. J. Exp. Bot. 47, 291-305.
-
(1996)
J. Exp. Bot.
, vol.47
, pp. 291-305
-
-
Hughes, M.A.1
Dunn, M.A.2
-
21
-
-
33644874404
-
Gramene: A bird's eye view of cereal genomes
-
Jaiswal, P., Ni, J., Yap, I., Ware, D., Spooner, W., Youens-Clark, K., Ren, L., Liang, C., Zhao, W., Ratnapu, K., Faga, B., Canaran, P., Fogleman, M., Hebbard, C., Avraham, S., Schmidt, S., Casstevens, T.M., Buckler, E.S., Stein, L. and McCouch, S. (2006) Gramene: a bird's eye view of cereal genomes. Nucleic Acids Res. 34, D717-D723.
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Jaiswal, P.1
Ni, J.2
Yap, I.3
Ware, D.4
Spooner, W.5
Youens-Clark, K.6
Ren, L.7
Liang, C.8
Zhao, W.9
Ratnapu, K.10
Faga, B.11
Canaran, P.12
Fogleman, M.13
Hebbard, C.14
Avraham, S.15
Schmidt, S.16
Casstevens, T.M.17
Buckler, E.S.18
Stein, L.19
McCouch, S.20
more..
-
22
-
-
0037663724
-
Beyond 100 genomes
-
Janssen, P., Audit, B., Cases, I., Darzentas, N., Goldovsky, L., Kunin, V., Lopez-Bigas, N., Peregrin-Alvarez, J.M., Pereira-Leal, J.B., Tsoka, S. and Ouzounis, C.A. (2003) Beyond 100 genomes. Genome Biol. 4, 402.1-402.3.
-
(2003)
Genome Biol.
, vol.4
-
-
Janssen, P.1
Audit, B.2
Cases, I.3
Darzentas, N.4
Goldovsky, L.5
Kunin, V.6
Lopez-Bigas, N.7
Peregrin-Alvarez, J.M.8
Pereira-Leal, J.B.9
Tsoka, S.10
Ouzounis, C.A.11
-
24
-
-
0028445693
-
Destabilisation of rbcS sense transcripts by antisense RNA
-
Jiang, C.-Z., Kliebenstein, D., Ke, N. and Rodermel, S. (1994) Destabilisation of rbcS sense transcripts by antisense RNA. Plant Mol. Biol. 25, 569-576.
-
(1994)
Plant Mol. Biol.
, vol.25
, pp. 569-576
-
-
Jiang, C.-Z.1
Kliebenstein, D.2
Ke, N.3
Rodermel, S.4
-
25
-
-
24944497900
-
A tiling microarray expression analysis of rice chromosome 4 suggests a chromosome-level regulation of transcription
-
Jiao, Y., Jia, P., Wang, X., Su, N., Yu, S., Zhang, D., Ma, L., Feng, Q., Jin, Z., Li, L., Xue, Y., Cheng, Z., Zhao, H., Han, B. and Deng, X.W. (2005) A tiling microarray expression analysis of rice chromosome 4 suggests a chromosome-level regulation of transcription. Plant Cell, 17, 1641-1657.
-
(2005)
Plant Cell
, vol.17
, pp. 1641-1657
-
-
Jiao, Y.1
Jia, P.2
Wang, X.3
Su, N.4
Yu, S.5
Zhang, D.6
Ma, L.7
Feng, Q.8
Jin, Z.9
Li, L.10
Xue, Y.11
Cheng, Z.12
Zhao, H.13
Han, B.14
Deng, X.W.15
-
26
-
-
0032979731
-
Dynamics of gene expression revealed by comparison of serial analysis of gene expression transcript profiles from yeast grown on two different carbon sources
-
Kal, A.J., van Zonneveld, A.J., Benes, V., van den Berg, M., Koerkamp, M.G., Albermann, K., Strack, N., Ruijter, J.M., Richter, A., Dujon, B., Ansorge, W. and Tabak, H.F. (1999) Dynamics of gene expression revealed by comparison of serial analysis of gene expression transcript profiles from yeast grown on two different carbon sources. Mol. Biol. Cell. 10, 1859-1872.
-
(1999)
Mol. Biol. Cell.
, vol.10
, pp. 1859-1872
-
-
Kal, A.J.1
Van Zonneveld, A.J.2
Benes, V.3
Van Den Berg, M.4
Koerkamp, M.G.5
Albermann, K.6
Strack, N.7
Ruijter, J.M.8
Richter, A.9
Dujon, B.10
Ansorge, W.11
Tabak, H.F.12
-
27
-
-
0347995023
-
Identification of differentially expressed genes in mouse kidney after irradiation using microarray analysis
-
Kruse, J.J.C.M., te Poele, J.A.M., Velds, A., Kerkhoven, R.M., Boersma, L.J., Russell, N.S. and Stewart, F.A. (2004) Identification of differentially expressed genes in mouse kidney after irradiation using microarray analysis. Radiat. Res. 161, 28-38.
-
(2004)
Radiat. Res.
, vol.161
, pp. 28-38
-
-
Kruse, J.J.C.M.1
Te Poele, J.A.M.2
Velds, A.3
Kerkhoven, R.M.4
Boersma, L.J.5
Russell, N.S.6
Stewart, F.A.7
-
28
-
-
0033765314
-
A small heat shock protein cooperates with heat shock protein 70 systems to reactivate a heat-denatured protein
-
Lee, G.J. and Vierling, E. (2000) A small heat shock protein cooperates with heat shock protein 70 systems to reactivate a heat-denatured protein. Plant Physiol. 122, 189-198.
-
(2000)
Plant Physiol.
, vol.122
, pp. 189-198
-
-
Lee, G.J.1
Vierling, E.2
-
29
-
-
0038460042
-
Use of serial analysis of gene expression technology to reveal changes in gene expression in Arabidopsis pollen undergoing cold stress
-
Lee, J.-Y. and Lee, D.-H. (2003) Use of serial analysis of gene expression technology to reveal changes in gene expression in Arabidopsis pollen undergoing cold stress. Plant Physiol. 132, 517-529.
-
(2003)
Plant Physiol.
, vol.132
, pp. 517-529
-
-
Lee, J.-Y.1
Lee, D.-H.2
-
30
-
-
0036000101
-
SAGE profiling and demonstration of differential gene expression along the axial developmental gradient of lignifying xylem in loblolly pine (Pinus taeda)
-
Lorenz, W.W. and Dean, J.F. (2002) SAGE profiling and demonstration of differential gene expression along the axial developmental gradient of lignifying xylem in loblolly pine (Pinus taeda). Tree Physiol. 5, 301-310.
-
(2002)
Tree Physiol.
, vol.5
, pp. 301-310
-
-
Lorenz, W.W.1
Dean, J.F.2
-
31
-
-
0000121454
-
Photosynthesis and ribulose 1,5-bisphosphate carboxylase in rice leaves: Changes in photosynthesis and enzymes involved in carbon assimilation from leaf development through senescence
-
Makino, A., Mae, T. and Ohira, K. (1983) Photosynthesis and ribulose 1,5-bisphosphate carboxylase in rice leaves: changes in photosynthesis and enzymes involved in carbon assimilation from leaf development through senescence. Plant Physiol. 73, 1002-1007.
-
(1983)
Plant Physiol.
, vol.73
, pp. 1002-1007
-
-
Makino, A.1
Mae, T.2
Ohira, K.3
-
32
-
-
0032793927
-
Winter survival of transgenic alfalfa overexpressing superoxide dismutase
-
McKersie, B.D., Bowley, S.R. and Jones, K.S. (1999) Winter survival of transgenic alfalfa overexpressing superoxide dismutase. Plant Physiol. 119, 839-848.
-
(1999)
Plant Physiol.
, vol.119
, pp. 839-848
-
-
McKersie, B.D.1
Bowley, S.R.2
Jones, K.S.3
-
33
-
-
30144445464
-
Abiotic stress, the field environment and stress combination
-
Mittler, R. (2006) Abiotic stress, the field environment and stress combination. Trends Plant Sci. 11, 15-19.
-
(2006)
Trends Plant Sci.
, vol.11
, pp. 15-19
-
-
Mittler, R.1
-
34
-
-
0031452705
-
Rise of fructan exohydrolase activity in stubble of Lolium perenne after defoliation is decreased by uniconazole, an inhibitor of the biosynthesis of gibberellins
-
Morvan, A., Challe, G., Prud'homme, M.-P., Le Saos, J. and Boucaud, J. (1997) Rise of fructan exohydrolase activity in stubble of Lolium perenne after defoliation is decreased by uniconazole, an inhibitor of the biosynthesis of gibberellins. New Phytol. 136, 81-88.
-
(1997)
New Phytol.
, vol.136
, pp. 81-88
-
-
Morvan, A.1
Challe, G.2
Prud'homme, M.-P.3
Le Saos, J.4
Boucaud, J.5
-
35
-
-
30344482376
-
Optimal leaf nitrogen content of an evergreen understorey plant in a temperate climate
-
(van der Est, A. and Bruce, D., eds), Lawrence, KS: Allen Press
-
Muller, O., Hikosaka, K., Anten, N.P.R., Hirose, T. and Werger, M.J.A. (2005) Optimal leaf nitrogen content of an evergreen understorey plant in a temperate climate. In Photosynthesis: Fundamental Aspects to Global Perspectives (van der Est, A. and Bruce, D., eds), pp. 636-638. Lawrence, KS: Allen Press.
-
(2005)
Photosynthesis: Fundamental Aspects to Global Perspectives
, pp. 636-638
-
-
Muller, O.1
Hikosaka, K.2
Anten, N.P.R.3
Hirose, T.4
Werger, M.J.A.5
-
36
-
-
33644876658
-
Plant MPSS databases: Signature-based transcriptional resources for analyses of mRNA and small RNA
-
Nakano, M., Nobuta, K., Vemaraju, K., Tej, S.S., Skogen, J.W. and Meyers, B.C. (2006) Plant MPSS databases: signature-based transcriptional resources for analyses of mRNA and small RNA. Nucleic Acids Res. 34, D731-D735.
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Nakano, M.1
Nobuta, K.2
Vemaraju, K.3
Tej, S.S.4
Skogen, J.W.5
Meyers, B.C.6
-
37
-
-
33749260517
-
A discussion of statistical methods for design and analysis of microarray experiments for plant scientists
-
Nettleton, D. (2006) A discussion of statistical methods for design and analysis of microarray experiments for plant scientists. Plant Cell, 18, 2112-2121.
-
(2006)
Plant Cell
, vol.18
, pp. 2112-2121
-
-
Nettleton, D.1
-
38
-
-
0030818414
-
Heat stress proteins and transcription factors
-
Nover, L. and Scharf, K.-D. (1997) Heat stress proteins and transcription factors. Mol. Cell. Life Sci. 53, 80-103.
-
(1997)
Mol. Cell. Life Sci.
, vol.53
, pp. 80-103
-
-
Nover, L.1
Scharf, K.-D.2
-
39
-
-
1442329649
-
Antisense transcripts with rice full-length cDNAs
-
Osato, N., Yamada, H., Satoh, K., Ooka, H., Yamamoto, M., Suzuki, K., Kawai, J., Carninci, P., Ohtomo, Y., Murakami, K., Matsubara, K., Kikuchi, S. and Hayashizaki, Y. (2003) Antisense transcripts with rice full-length cDNAs. Genome Biol. 5, R5.
-
(2003)
Genome Biol.
, vol.5
-
-
Osato, N.1
Yamada, H.2
Satoh, K.3
Ooka, H.4
Yamamoto, M.5
Suzuki, K.6
Kawai, J.7
Carninci, P.8
Ohtomo, Y.9
Murakami, K.10
Matsubara, K.11
Kikuchi, S.12
Hayashizaki, Y.13
-
40
-
-
85032100599
-
Sink control of nitrogen assimilation during regrowth of ryegrass
-
Ourry, A., Boucaud, J. and Duyme, M. (1990) Sink control of nitrogen assimilation during regrowth of ryegrass. Plant Cell Environ. 13, 185-189.
-
(1990)
Plant Cell Environ.
, vol.13
, pp. 185-189
-
-
Ourry, A.1
Boucaud, J.2
Duyme, M.3
-
42
-
-
0000876838
-
Localization of expression of three cold-induced genes, blt101, blt4.9, and blt14, in different tissues of the crown and developing leaves of cold-acclimated cultivated barley
-
Pearce, R.S., Houlston, C.E., Atherton, K.M., Rixon, J.E., Harrison, P., Hughes, M.A. and Dunn, M.A. (1998) Localization of expression of three cold-induced genes, blt101, blt4.9, and blt14, in different tissues of the crown and developing leaves of cold-acclimated cultivated barley. Plant Physiol. 117, 787-795.
-
(1998)
Plant Physiol.
, vol.117
, pp. 787-795
-
-
Pearce, R.S.1
Houlston, C.E.2
Atherton, K.M.3
Rixon, J.E.4
Harrison, P.5
Hughes, M.A.6
Dunn, M.A.7
-
43
-
-
0029139317
-
Organ-specific stability of two Lemna rbcS mRNAs is determined primarily in the nuclear compartment
-
Peters, J.L. and Silverthorne, J. (1995) Organ-specific stability of two Lemna rbcS mRNAs is determined primarily in the nuclear compartment. Plant Cell, 7, 131-140.
-
(1995)
Plant Cell
, vol.7
, pp. 131-140
-
-
Peters, J.L.1
Silverthorne, J.2
-
44
-
-
0031127685
-
mRNA stability and localisation of the low-temperature-responsive barley gene family blt14
-
Phillips, J.R., Dunn, M.A. and Hughes, M.A. (1997) mRNA stability and localisation of the low-temperature-responsive barley gene family blt14. Plant Mol. Biol. 33, 1013-1023.
-
(1997)
Plant Mol. Biol.
, vol.33
, pp. 1013-1023
-
-
Phillips, J.R.1
Dunn, M.A.2
Hughes, M.A.3
-
45
-
-
0027140545
-
Differential involvement of the circadian clock in the expression of genes required for ribulose-1,5-bisphosphate carboxylase/oxygenase synthesis, assembly, and activation in Arabidopsis thaliana
-
Pilgrim, M.L. and McClung, C.R. (1993) Differential involvement of the circadian clock in the expression of genes required for ribulose-1,5- bisphosphate carboxylase/oxygenase synthesis, assembly, and activation in Arabidopsis thaliana. Plant Physiol. 103, 553-564.
-
(1993)
Plant Physiol.
, vol.103
, pp. 553-564
-
-
Pilgrim, M.L.1
McClung, C.R.2
-
46
-
-
16644378940
-
Short-day potentiation of low temperature-induced gene expression of a C-repeat-binding factor-controlled gene during cold acclimation in silver birch
-
Puhakainen, T., Li, C., Boije-Malm, M., Kangasjärvi, J., Heino, P. and Palva, E.T. (2004) Short-day potentiation of low temperature-induced gene expression of a C-repeat-binding factor-controlled gene during cold acclimation in silver birch. Plant Physiol. 136, 4299-4307.
-
(2004)
Plant Physiol.
, vol.136
, pp. 4299-4307
-
-
Puhakainen, T.1
Li, C.2
Boije-Malm, M.3
Kangasjärvi, J.4
Heino, P.5
Palva, E.T.6
-
48
-
-
0001900668
-
The impact of decreased Rubisco on photosynthesis, growth, allocation and storage in tobacco plants which have been transformed with antisense rbcS
-
Quick, W.P., Schurr, U., Fichtner, K., Schulze, E.-D., Rodermel, S.R., Bogorad, L. and Stitt, M. (1991) The impact of decreased Rubisco on photosynthesis, growth, allocation and storage in tobacco plants which have been transformed with antisense rbcS. Plant J. 1, 51-58.
-
(1991)
Plant J.
, vol.1
, pp. 51-58
-
-
Quick, W.P.1
Schurr, U.2
Fichtner, K.3
Schulze, E.-D.4
Rodermel, S.R.5
Bogorad, L.6
Stitt, M.7
-
49
-
-
0032743873
-
Differential methylation of genes and retrotransposons facilitates shotgun sequencing of the maize genome
-
Rabinowicz, P.D., Schutz, K., Dedhia, N., Yordan, C., Parnell, L.D., Stein, L., McCombie, W.R. and Martienssen, R.A. (1999) Differential methylation of genes and retrotransposons facilitates shotgun sequencing of the maize genome. Nat. Genet. 23, 305-308.
-
(1999)
Nat. Genet.
, vol.23
, pp. 305-308
-
-
Rabinowicz, P.D.1
Schutz, K.2
Dedhia, N.3
Yordan, C.4
Parnell, L.D.5
Stein, L.6
McCombie, W.R.7
Martienssen, R.A.8
-
51
-
-
2342501846
-
Development and evaluation of an Arabidopsis whole genome Affymetrix probe array
-
Redman, J.C., Haas, B.J., Tanimoto, G. and Town, C.D. (2004) Development and evaluation of an Arabidopsis whole genome Affymetrix probe array. Plant J. 38, 545-561.
-
(2004)
Plant J.
, vol.38
, pp. 545-561
-
-
Redman, J.C.1
Haas, B.J.2
Tanimoto, G.3
Town, C.D.4
-
52
-
-
0034923481
-
Differential expression of a- and b-expansin genes in the elongating leaf of Festuca pratensis
-
Reidy, B., McQueen-Mason, S., Nosberger, J. and Fleming, A. (2001) Differential expression of a- and b-expansin genes in the elongating leaf of Festuca pratensis. Plant Mol. Biol. 46, 491-504.
-
(2001)
Plant Mol. Biol.
, vol.46
, pp. 491-504
-
-
Reidy, B.1
McQueen-Mason, S.2
Nosberger, J.3
Fleming, A.4
-
53
-
-
0028191675
-
Comparison of dehydrin gene expression and freezing tolerance in Bromus inermis and Secale cereale grown in controlled environments, hydroponics, and the field
-
Robertson, A.J., Weninger, A., Wilen, R.W., Fu, P. and Gusta, L.V. (1994) Comparison of dehydrin gene expression and freezing tolerance in Bromus inermis and Secale cereale grown in controlled environments, hydroponics, and the field. Plant Physiol. 106, 1213-1216.
-
(1994)
Plant Physiol.
, vol.106
, pp. 1213-1216
-
-
Robertson, A.J.1
Weninger, A.2
Wilen, R.W.3
Fu, P.4
Gusta, L.V.5
-
54
-
-
15444364810
-
Maximizing the efficacy of SAGE analysis identifies novel transcripts in Arabidopsis
-
Robinson, S.J., Cram, D.J., Lewis, C.T. and Parkin, I.A.P. (2004) Maximizing the efficacy of SAGE analysis identifies novel transcripts in Arabidopsis. Plant Physiol. 136, 3223-3233.
-
(2004)
Plant Physiol.
, vol.136
, pp. 3223-3233
-
-
Robinson, S.J.1
Cram, D.J.2
Lewis, C.T.3
Parkin, I.A.P.4
-
55
-
-
0024291358
-
Nuclear-organelle interactions: Nuclear antisense gene inhibits ribulose bisphosphate carboxylase enzyme levels in transformed tobacco plants
-
Rodermel, S.R., Abbott, M.S. and Bogorad, L. (1988) Nuclear-organelle interactions: nuclear antisense gene inhibits ribulose bisphosphate carboxylase enzyme levels in transformed tobacco plants. Cell, 55, 673-681.
-
(1988)
Cell
, vol.55
, pp. 673-681
-
-
Rodermel, S.R.1
Abbott, M.S.2
Bogorad, L.3
-
56
-
-
0037195213
-
Statistical evaluation of SAGE libraries: Consequences for experimental design
-
Ruijter, J.M., Van Kampen, A.H.C. and Baas, F. (2002) Statistical evaluation of SAGE libraries: consequences for experimental design. Physiol. Genomics, 11, 37-44.
-
(2002)
Physiol. Genomics
, vol.11
, pp. 37-44
-
-
Ruijter, J.M.1
Van Kampen, A.H.C.2
Baas, F.3
-
57
-
-
0036246030
-
Using the transcriptome to annotate the genome
-
Saha, S., Sparks, A.B., Rago, C., Akmaev, V., Wang, C.J., Vogelstein, B., Kinzler, K.W. and Velculescu, V.E. (2002) Using the transcriptome to annotate the genome. Nat. Biotechnol. 20, 508-512.
-
(2002)
Nat. Biotechnol.
, vol.20
, pp. 508-512
-
-
Saha, S.1
Sparks, A.B.2
Rago, C.3
Akmaev, V.4
Wang, C.J.5
Vogelstein, B.6
Kinzler, K.W.7
Velculescu, V.E.8
-
58
-
-
0141976384
-
Generation and analysis of expressed sequence tags in perennial ryegrass (Lolium perenne L.)
-
Sawbridge, T., Ong, E.-K., Binnion, C., Emmerling, M., McInnes, R., Meath, K., Nguyen, N., Nunan, K., O'Neill, M. and O'Toole, F. (2003) Generation and analysis of expressed sequence tags in perennial ryegrass (Lolium perenne L.). Plant Sci. 165, 1089-1100.
-
(2003)
Plant Sci.
, vol.165
, pp. 1089-1100
-
-
Sawbridge, T.1
Ong, E.-K.2
Binnion, C.3
Emmerling, M.4
McInnes, R.5
Meath, K.6
Nguyen, N.7
Nunan, K.8
O'Neill, M.9
O'Toole, F.10
-
59
-
-
10644266747
-
Rubisco without the Calvin cycle improves the carbon efficiency of developing green seeds
-
Schwender, J., Goffman, F., Ohlrogge, J.B. and Shachar-Hill, Y. (2004) Rubisco without the Calvin cycle improves the carbon efficiency of developing green seeds. Nature, 432, 779-782.
-
(2004)
Nature
, vol.432
, pp. 779-782
-
-
Schwender, J.1
Goffman, F.2
Ohlrogge, J.B.3
Shachar-Hill, Y.4
-
60
-
-
0029812283
-
A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization
-
Shalon, D., Smith, S.J. and Brown, P.O. (1996) A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization. Genome Res. 6, 639-645.
-
(1996)
Genome Res.
, vol.6
, pp. 639-645
-
-
Shalon, D.1
Smith, S.J.2
Brown, P.O.3
-
61
-
-
0036001081
-
Regulation and function of ascorbate peroxidase isoenzymes
-
Shigeoka, S., Ishikawa, T., Tamoi, M., Miyagawa, Y., Takeda, T., Yabuta, Y. and Yoshimura, K. (2002) Regulation and function of ascorbate peroxidase isoenzymes. J. Exp. Bot. 53, 1305-1319.
-
(2002)
J. Exp. Bot.
, vol.53
, pp. 1305-1319
-
-
Shigeoka, S.1
Ishikawa, T.2
Tamoi, M.3
Miyagawa, Y.4
Takeda, T.5
Yabuta, Y.6
Yoshimura, K.7
-
62
-
-
0025574862
-
Post-transcriptional regulation of organ-specific expression of individual rbcS mRNAs in Lemna gibba
-
Silverthorne, J. and Tobin, E.M. (1990) Post-transcriptional regulation of organ-specific expression of individual rbcS mRNAs in Lemna gibba. Plant Cell, 2, 1181-1190.
-
(1990)
Plant Cell
, vol.2
, pp. 1181-1190
-
-
Silverthorne, J.1
Tobin, E.M.2
-
63
-
-
3242799971
-
Sequence analysis of the long arm of rice chromosome 11 for rice-wheat synteny
-
Singh, N., Raghuvanshi, S., Srivastava, S., Gaur, A., Pal, A., Dalal, V., Singh, A., Ghazi, I., Bhargav, A., Yadav, M., Dixit, A., Batra, K., Gaikwad, K., Sharma, T., Mohanty, A., Bharti, A., Kapur, A., Gupta, V., Kumar, D., Vij, S., Vydianathan, R., Khurana, P., Sharma, S., McCombie, W.R., Messing, J., Wing, R., Sasaki, T., Khurana, P., Mohapatra, T., Khurana, J. and Tyagi, A. (2004) Sequence analysis of the long arm of rice chromosome 11 for rice-wheat synteny. Funct. Integ. Genomics, 4, 102-117.
-
(2004)
Funct. Integ. Genomics
, vol.4
, pp. 102-117
-
-
Singh, N.1
Raghuvanshi, S.2
Srivastava, S.3
Gaur, A.4
Pal, A.5
Dalal, V.6
Singh, A.7
Ghazi, I.8
Bhargav, A.9
Yadav, M.10
Dixit, A.11
Batra, K.12
Gaikwad, K.13
Sharma, T.14
Mohanty, A.15
Bharti, A.16
Kapur, A.17
Gupta, V.18
Kumar, D.19
Vij, S.20
Vydianathan, R.21
Khurana, P.22
Sharma, S.23
McCombie, W.R.24
Messing, J.25
Wing, R.26
Sasaki, T.27
Khurana, P.28
Mohapatra, T.29
Khurana, J.30
Tyagi, A.31
more..
-
64
-
-
0036796318
-
Mosaic organization of orthologous sequences in grass genomes
-
Song, R., Llaca, V. and Messing, J. (2002) Mosaic organization of orthologous sequences in grass genomes. Genome Res. 12, 1549-1555.
-
(2002)
Genome Res.
, vol.12
, pp. 1549-1555
-
-
Song, R.1
Llaca, V.2
Messing, J.3
-
65
-
-
0042024907
-
Comparative DNA sequence analysis of wheat and rice genomes
-
Sorrells, M.E., La Rota, M., Bermudez-Kandianis, C.E., Greene, R.A., Kantety, R., Munkvold, J.D., Miftahudin, Mahmoud, A., Ma, X., Gustafson, P.J., Qi, L.L., Echalier, B., Gill, B.S., Matthews, D.E., Lazo, G.R., Chao, S., Anderson, O.D., Edwards, H., Linkiewicz, A.M., Dubcovsky, J., Akhunov, E.D., Dvorak, J., Zhang, D., Nguyen, H.T., Peng, J., Lapitan, N.L.V., Gonzalez-Hernandez, J.L., Anderson, J.A., Hossain, K., Kalavacharla, V., Kianian, S.F., Choi, D.-W., Close, T.J., Dilbirligi, M., Gill, K.S., Steber, C., Walker-Simmons, M.K., McGuire, P.E. and Qualset, C.O. (2003) Comparative DNA sequence analysis of wheat and rice genomes. Genome Res. 13, 1818-1827.
-
(2003)
Genome Res.
, vol.13
, pp. 1818-1827
-
-
Sorrells, M.E.1
La Rota, M.2
Bermudez-Kandianis, C.E.3
Greene, R.A.4
Kantety, R.5
Munkvold, J.D.6
Miftahudin7
Mahmoud, A.8
Ma, X.9
Gustafson, P.J.10
Qi, L.L.11
Echalier, B.12
Gill, B.S.13
Matthews, D.E.14
Lazo, G.R.15
Chao, S.16
Anderson, O.D.17
Edwards, H.18
Linkiewicz, A.M.19
Dubcovsky, J.20
Akhunov, E.D.21
Dvorak, J.22
Zhang, D.23
Nguyen, H.T.24
Peng, J.25
Lapitan, N.L.V.26
Gonzalez-Hernandez, J.L.27
Anderson, J.A.28
Hossain, K.29
Kalavacharla, V.30
Kianian, S.F.31
Choi, D.-W.32
Close, T.J.33
Dilbirligi, M.34
Gill, K.S.35
Steber, C.36
Walker-Simmons, M.K.37
McGuire, P.E.38
Qualset, C.O.39
more..
-
66
-
-
0003006775
-
Breeding forage plants in the genome era
-
(Spangenberg, G., ed.), London: Kluwer Academic Publishers
-
Spangenberg, G., Kalla, R., Lidgett, A., Sawbridge, T., Ong, E.K. and John, U. (2001) Breeding forage plants in the genome era. In Molecular Breeding of Forage Crops (Spangenberg, G., ed.), pp. 1-39. London: Kluwer Academic Publishers.
-
(2001)
Molecular Breeding of Forage Crops
, pp. 1-39
-
-
Spangenberg, G.1
Kalla, R.2
Lidgett, A.3
Sawbridge, T.4
Ong, E.K.5
John, U.6
-
67
-
-
0037001967
-
RUBISCO: Structure, regulatory interactions, and possibilities for a better enzyme
-
Spreitzer, R.J. and Salvucci, M.E. (2002) RUBISCO: structure, regulatory interactions, and possibilities for a better enzyme. Annu. Rev. Plant Biol. 53, 449-475.
-
(2002)
Annu. Rev. Plant Biol.
, vol.53
, pp. 449-475
-
-
Spreitzer, R.J.1
Salvucci, M.E.2
-
68
-
-
0033828629
-
A quantitative evaluation of SAGE
-
Stollberg, J., Urschitz, J., Urban, Z. and Boyd, C.D. (2000) A quantitative evaluation of SAGE. Genome Res. 10, 1241-1248.
-
(2000)
Genome Res.
, vol.10
, pp. 1241-1248
-
-
Stollberg, J.1
Urschitz, J.2
Urban, Z.3
Boyd, C.D.4
-
69
-
-
0037136230
-
Small heat shock proteins and stress tolerance in plants
-
Sun, W., Van Montagu, M. and Verbruggen, N. (2002) Small heat shock proteins and stress tolerance in plants. Biochim. Biophys. Acta, 1577, 1-9.
-
(2002)
Biochim. Biophys. Acta
, vol.1577
, pp. 1-9
-
-
Sun, W.1
Van Montagu, M.2
Verbruggen, N.3
-
70
-
-
0026456032
-
Degradation products of the mRNA encoding the small subunit of ribulose-1,5-bisphosphate carboxylase in soybean and transgenic petunia
-
Thompson, D.M., Tanzer, M.M. and Meagher, R.B. (1990) Degradation products of the mRNA encoding the small subunit of ribulose-1,5-bisphosphate carboxylase in soybean and transgenic petunia. Plant Cell, 4, 47-58.
-
(1990)
Plant Cell
, vol.4
, pp. 47-58
-
-
Thompson, D.M.1
Tanzer, M.M.2
Meagher, R.B.3
-
71
-
-
0035999804
-
Self-incompatibility in ryegrass 12. Genotyping and mapping the S and Z loci of Lolium perenne L.
-
Thorogood, D., Kaiser, W.J., Jones, J.G. and Armstead, I. (2002) Self-incompatibility in ryegrass 12. Genotyping and mapping the S and Z loci of Lolium perenne L. Heredity, 88, 385-390.
-
(2002)
Heredity
, vol.88
, pp. 385-390
-
-
Thorogood, D.1
Kaiser, W.J.2
Jones, J.G.3
Armstead, I.4
-
72
-
-
0031397411
-
Source strength regulates an early phase transition of tobacco shoot morphogenesis
-
Tsai, C.-H., Miller, A., Spalding, M. and Rodermel, S. (1997) Source strength regulates an early phase transition of tobacco shoot morphogenesis. Plant Physiol. 115, 907-914.
-
(1997)
Plant Physiol.
, vol.115
, pp. 907-914
-
-
Tsai, C.-H.1
Miller, A.2
Spalding, M.3
Rodermel, S.4
-
73
-
-
0028789793
-
Serial analysis of gene expression
-
Velculescu, V.E., Zhang, L., Vogelstein, B. and Kinzler, K.W. (1995) Serial analysis of gene expression. Science, 270, 484-487.
-
(1995)
Science
, vol.270
, pp. 484-487
-
-
Velculescu, V.E.1
Zhang, L.2
Vogelstein, B.3
Kinzler, K.W.4
-
74
-
-
0031442518
-
Characterization of the yeast transcriptome
-
Velculescu, V.E., Zhang, L., Zhou, W., Vogelstein, J., Basrai, M.A., Bassett, D.E. Jr, Hieter, P., Vogelstein, B. and Kinzler, K.W. (1997) Characterization of the yeast transcriptome. Cell, 88, 243-251.
-
(1997)
Cell
, vol.88
, pp. 243-251
-
-
Velculescu, V.E.1
Zhang, L.2
Zhou, W.3
Vogelstein, J.4
Basrai, M.A.5
Bassett Jr., D.E.6
Hieter, P.7
Vogelstein, B.8
Kinzler, K.W.9
-
75
-
-
13244287798
-
Bayesian model accounting for within-class biological variability in serial analysis of gene expression (SAGE)
-
Vêncio, R.Z., Brentani, H., Patrao, D.F. and Pereira, C.A. (2004) Bayesian model accounting for within-class biological variability in serial analysis of gene expression (SAGE). BMC Bioinformatics, 5, 119.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 119
-
-
Vêncio, R.Z.1
Brentani, H.2
Patrao, D.F.3
Pereira, C.A.4
-
76
-
-
24644448635
-
Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana
-
Wang, X.J., Gaasterland, T. and Chua, N.H. (2005) Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana. Genome Biol. 6, R30.
-
(2005)
Genome Biol.
, vol.6
-
-
Wang, X.J.1
Gaasterland, T.2
Chua, N.H.3
-
77
-
-
0026311257
-
Expression dynamics of the tomato rbcS gene family during development
-
Wanner, L.A. and Gruissem, W. (1991) Expression dynamics of the tomato rbcS gene family during development. Plant Cell, 3, 1289-1303.
-
(1991)
Plant Cell
, vol.3
, pp. 1289-1303
-
-
Wanner, L.A.1
Gruissem, W.2
-
78
-
-
0345392696
-
What affects mRNA levels in leaves of field-grown aspen? A study of developmental and environmental influences
-
Wissel, K., Pettersson, F., Berglund, A. and Jansson, S. (2003) What affects mRNA levels in leaves of field-grown aspen? A study of developmental and environmental influences. Plant Physiol. 133, 1190-1197.
-
(2003)
Plant Physiol.
, vol.133
, pp. 1190-1197
-
-
Wissel, K.1
Pettersson, F.2
Berglund, A.3
Jansson, S.4
-
79
-
-
1942455822
-
Seasonal changes in gene expression at the sapwood-heartwood transition zone of black locust (Robinia pseudoacacia) revealed by cDNA microarray analysis
-
Yang, J., Kamdem, D.P., Keathley, D.E. and Han, K.-H. (2004) Seasonal changes in gene expression at the sapwood-heartwood transition zone of black locust (Robinia pseudoacacia) revealed by cDNA microarray analysis. Tree Physiol. 24, 461-474.
-
(2004)
Tree Physiol.
, vol.24
, pp. 461-474
-
-
Yang, J.1
Kamdem, D.P.2
Keathley, D.E.3
Han, K.-H.4
-
80
-
-
0030962307
-
Gene expression profiles in normal and cancer cells
-
Zhang, L., Zhou, W., Velculescu, V.E., Kern, S.E., Hruban, R.H., Hamilton, S.R., Vogelstein, B. and Kinzler, K.W. (1997) Gene expression profiles in normal and cancer cells. Science, 276, 1268-1272.
-
(1997)
Science
, vol.276
, pp. 1268-1272
-
-
Zhang, L.1
Zhou, W.2
Velculescu, V.E.3
Kern, S.E.4
Hruban, R.H.5
Hamilton, S.R.6
Vogelstein, B.7
Kinzler, K.W.8
|