메뉴 건너뛰기




Volumn 12, Issue 10, 2002, Pages 1549-1555

Mosaic organization of orthologous sequences in grass genomes

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHROMOSOME; CONTROLLED STUDY; DNA SEQUENCE; EVOLUTION; GENE AMPLIFICATION; GENE MAPPING; GENE SEQUENCE; GENE STRUCTURE; GENETIC CONSERVATION; GENETIC VARIABILITY; GENOME; GRASS; MAIZE; MOSAICISM; NONHUMAN; NUCLEOTIDE SEQUENCE; ORTHOLOGY; PLANT GENETICS; PRIORITY JOURNAL; RICE; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; SORGHUM;

EID: 0036796318     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.268302     Document Type: Article
Times cited : (116)

References (36)
  • 1
    • 0029099016 scopus 로고
    • The BTB/POZ domain: A new protein-protein interaction motif common to DNA- and action-binding proteins
    • Albagli, O., Dhordain, P., Deweindt, C., Lecicq, G., and Leprince, D. 1995. The BTB/POZ domain: A new protein-protein interaction motif common to DNA- and action-binding proteins. Cell Growth Differ. 6: 1193-1198.
    • (1995) Cell Growth Differ , vol.6 , pp. 1193-1198
    • Albagli, O.1    Dhordain, P.2    Deweindt, C.3    Lecicq, G.4    Leprince, D.5
  • 3
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • The Arabidopsis Genome Initiative
    • The Arabidopsis Genome Initiative. 2000. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815.
    • (2000) Nature , vol.408 , pp. 796-815
  • 4
    • 51249171246 scopus 로고
    • Nuclear DNA content of some important plant species
    • Arumunganathan, K. and Earle, E.D. 1991. Nuclear DNA content of some important plant species. Plant Mol. Biol. Rep. 9: 208-219.
    • (1991) Plant Mol. Biol. Rep , vol.9 , pp. 208-219
    • Arumunganathan, K.1    Earle, E.D.2
  • 5
    • 0006667895 scopus 로고    scopus 로고
    • Insights into the structural and functional evolution of plant genomes afforded by the nucleotide sequences of Chromosomes 2 and 4 of Arabidoposis thaliana
    • Bancroft, I. 2000. Insights into the structural and functional evolution of plant genomes afforded by the nucleotide sequences of Chromosomes 2 and 4 of Arabidoposis thaliana. Yeast 17: 1-5.
    • (2000) Yeast , vol.17 , pp. 1-5
    • Bancroft, I.1
  • 6
    • 0033869323 scopus 로고    scopus 로고
    • Comparative sequence analysis of plant nuclear genomes: Microcolinearity and its many exceptions
    • Bennetzen, J.L. 2000. Comparative sequence analysis of plant nuclear genomes: Microcolinearity and its many exceptions. Plant Cell 12: 1021-1029.
    • (2000) Plant Cell , vol.12 , pp. 1021-1029
    • Bennetzen, J.L.1
  • 7
    • 0027239768 scopus 로고
    • Grasses as a single genetic system: Genome composition, colinearity and compatibility
    • Bennetzen, J.L. and Freeling, M. 1993. Grasses as a single genetic system: Genome composition, colinearity and compatibility. Trends Genet. 9: 259-261.
    • (1993) Trends Genet , vol.9 , pp. 259-261
    • Bennetzen, J.L.1    Freeling, M.2
  • 8
    • 0028053180 scopus 로고
    • Mobile inverted-repeat elements of the Tourist family are associated with the genes of many cereal grasses
    • Bureau, T.E. and Wessler, S.R. 1994. Mobile inverted-repeat elements of the Tourist family are associated with the genes of many cereal grasses. Proc. Natl. Acad. Sci. 91: 1411-1415.
    • (1994) Proc. Natl. Acad. Sci , vol.91 , pp. 1411-1415
    • Bureau, T.E.1    Wessler, S.R.2
  • 10
    • 0035807820 scopus 로고    scopus 로고
    • Association between divergence and interspersed repeats in mammalian noncoding genomic DNA
    • Chiaromonte, F., Yang, S., Elnitski, L., Yap, V.B., Miller, W., and Hardison, R.C. 2001. Association between divergence and interspersed repeats in mammalian noncoding genomic DNA. Proc. Natl. Acad. Sci. 98: 14503-14508.
    • (2001) Proc. Natl. Acad. Sci , vol.98 , pp. 14503-14508
    • Chiaromonte, F.1    Yang, S.2    Elnitski, L.3    Yap, V.B.4    Miller, W.5    Hardison, R.C.6
  • 11
    • 0000898564 scopus 로고
    • Characterization of the kafirin gene family from sorghum reveals extensive homology with zein from maize
    • DeRose, R.T., Ma, D.P., Kwon, I.J., Hasmain, S.E., Klassy, R.C., and Hall, T.C. 1989. Characterization of the kafirin gene family from sorghum reveals extensive homology with zein from maize. Plant Mol. Biol. 12: 245-256.
    • (1989) Plant Mol. Biol , vol.12 , pp. 245-256
    • DeRose, R.T.1    Ma, D.P.2    Kwon, I.J.3    Hasmain, S.E.4    Klassy, R.C.5    Hall, T.C.6
  • 12
    • 0034087970 scopus 로고    scopus 로고
    • Genome relationships: The grass model in current research
    • Devos, K. and Gale, M.D. 2000. Genome relationships: The grass model in current research. Plant Cell 12: 637-646.
    • (2000) Plant Cell , vol.12 , pp. 637-646
    • Devos, K.1    Gale, M.D.2
  • 13
    • 0032478340 scopus 로고    scopus 로고
    • Comparative genetics in the grasses
    • Gale, M.D. and Devos, K. 1998. Comparative genetics in the grasses. Proc. Natl. Acad. Sci. 95: 1971-1974.
    • (1998) Proc. Natl. Acad. Sci , vol.95 , pp. 1971-1974
    • Gale, M.D.1    Devos, K.2
  • 14
    • 0035147066 scopus 로고    scopus 로고
    • Patterns of chromosomal duplication in maize and their implications for comparative maps of the grasses
    • Gaut, B.S. 2001. Patterns of chromosomal duplication in maize and their implications for comparative maps of the grasses. Genome Res. 11: 55-66.
    • (2001) Genome Res , vol.11 , pp. 55-66
    • Gaut, B.S.1
  • 15
    • 0000764231 scopus 로고    scopus 로고
    • DNA sequence information for the segmental allotetraploid origin of maize
    • Gaut, B.S. and Doebley, J.F. 1997. DNA sequence information for the segmental allotetraploid origin of maize. Proc. Natl. Acad. Sci. 88: 2060-2064.
    • (1997) Proc. Natl. Acad. Sci , vol.88 , pp. 2060-2064
    • Gaut, B.S.1    Doebley, J.F.2
  • 16
    • 0029812835 scopus 로고    scopus 로고
    • Substitution rate comparisons between grasses and palms: Synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL
    • Gaut, B.S., Morton, B.R., McCaig, B.M., and Clegg, M.T. 1996. Substitution rate comparisons between grasses and palms: Synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL. Proc. Natl. Acad. Sci. 93: 10274-10279.
    • (1996) Proc. Natl. Acad. Sci , vol.93 , pp. 10274-10279
    • Gaut, B.S.1    Morton, B.R.2    McCaig, B.M.3    Clegg, M.T.4
  • 17
    • 0035119502 scopus 로고    scopus 로고
    • The MLA6 coiled-coil, NBS-LRR protein confers AvrMla6-dependent resistance specificity to Blumeria graminis f. sp. hordei in barley and wheat
    • Halterman, D., Zhou, F., Wei, F., Wise, R.P., and Schulze-Lefert, P. 2001. The MLA6 coiled-coil, NBS-LRR protein confers AvrMla6-dependent resistance specificity to Blumeria graminis f. sp. hordei in barley and wheat. Plant J. 25: 335-348.
    • (2001) Plant J , vol.25 , pp. 335-348
    • Halterman, D.1    Zhou, F.2    Wei, F.3    Wise, R.P.4    Schulze-Lefert, P.5
  • 18
    • 0035209964 scopus 로고    scopus 로고
    • Insertion preference of maize and rice miniature inverted repeat transposable elements as revealed by the analysis of nested elements
    • Jang, N. and Wessler, S.R. 2001. Insertion preference of maize and rice miniature inverted repeat transposable elements as revealed by the analysis of nested elements. Plant Cell 13: 2553-2564.
    • (2001) Plant Cell , vol.13 , pp. 2553-2564
    • Jang, N.1    Wessler, S.R.2
  • 19
    • 0034213530 scopus 로고    scopus 로고
    • Colinearity and gene density in grass genomes
    • Keller, B. and Feuillet, C. 2000. Colinearity and gene density in grass genomes. Trends Plant Sci. 5: 246-251.
    • (2000) Trends Plant Sci , vol.5 , pp. 246-251
    • Keller, B.1    Feuillet, C.2
  • 20
    • 0035103949 scopus 로고    scopus 로고
    • Evolutionary history of the grasses
    • Kellogg, E.A. 2000. Evolutionary history of the grasses. Plant Physiol. 125: 1198-1205.
    • (2000) Plant Physiol , vol.125 , pp. 1198-1205
    • Kellogg, E.A.1
  • 21
    • 0000527387 scopus 로고
    • Structure, expression, and heterogeneity of the rice seed prolamines
    • Kim, W.T. and Okita, T.W. 1988. Structure, expression, and heterogeneity of the rice seed prolamines. Plant Physiol. 88: 649-655.
    • (1988) Plant Physiol , vol.88 , pp. 649-655
    • Kim, W.T.1    Okita, T.W.2
  • 22
    • 0000433356 scopus 로고
    • Stable genetic transformation of intact Nicotiana cells by the particle bombardment process
    • Klein, T.M., Harper, E.C., Svab, Z., Sanford, J.C., Fromm, M.E., and Maliga, P. 1988. Stable genetic transformation of intact Nicotiana cells by the particle bombardment process. Proc. Natl. Acad. Sci. 85: 8502-8505.
    • (1988) Proc. Natl. Acad. Sci , vol.85 , pp. 8502-8505
    • Klein, T.M.1    Harper, E.C.2    Svab, Z.3    Sanford, J.C.4    Fromm, M.E.5    Maliga, P.6
  • 23
    • 0020027287 scopus 로고
    • In vitro transformation of plant protoplasts with Ti-plasmid DNA
    • Krens, F.A., Molendijk, L., Wullems, G.J., and Schilperoort, R.A. 1982. In vitro transformation of plant protoplasts with Ti-plasmid DNA. Nature 296: 72-74.
    • (1982) Nature , vol.296 , pp. 72-74
    • Krens, F.A.1    Molendijk, L.2    Wullems, G.J.3    Schilperoort, R.A.4
  • 26
    • 0035205619 scopus 로고    scopus 로고
    • Do plants have more genes than humans?
    • Messing, J. 2001. Do plants have more genes than humans? Trends Plant Sci. 6: 195-196.
    • (2001) Trends Plant Sci , vol.6 , pp. 195-196
    • Messing, J.1
  • 30
    • 0035189066 scopus 로고    scopus 로고
    • Sequence, regulation, and evolution of the maize 22-kD zein gene family
    • Song, R., Llaca, V., Linton, E., and Messing, J. 2001. Sequence, regulation, and evolution of the maize 22-kD zein gene family. Genome Res. 11: 1817-1825.
    • (2001) Genome Res , vol.11 , pp. 1817-1825
    • Song, R.1    Llaca, V.2    Linton, E.3    Messing, J.4
  • 31
    • 0034084963 scopus 로고    scopus 로고
    • The complete sequence of 340 kb of DNA around the rice Adh1-Adh2 region reveals interrupted colinearity with maize Chromosome 4
    • Tarchini, R., Biddle, P., Wineland, R., Tingy, S., and Rafalski, A. 2000. The complete sequence of 340 kb of DNA around the rice Adh1-Adh2 region reveals interrupted colinearity with maize Chromosome 4. Plant Cell 12: 381-391.
    • (2000) Plant Cell , vol.12 , pp. 381-391
    • Tarchini, R.1    Biddle, P.2    Wineland, R.3    Tingy, S.4    Rafalski, A.5
  • 32
    • 0032964297 scopus 로고    scopus 로고
    • BLAST 2 sequences: A new tool for comparing protein and nucleotide sequences
    • Tatusova, T.A. and Madden, T.L. 1999. BLAST 2 sequences: A new tool for comparing protein and nucleotide sequences. FEMS Microbiol. Lett. 174: 247-250.
    • (1999) FEMS Microbiol. Lett , vol.174 , pp. 247-250
    • Tatusova, T.A.1    Madden, T.L.2
  • 34
    • 0030200109 scopus 로고    scopus 로고
    • TRAF proteins and meprins share a conserved domain
    • Uren, A.G. and Vaux, D.L. 1996. TRAF proteins and meprins share a conserved domain. Trends Biochem. Sci. 21: 244-245.
    • (1996) Trends Biochem. Sci , vol.21 , pp. 244-245
    • Uren, A.G.1    Vaux, D.L.2
  • 35
    • 0020442864 scopus 로고
    • The pUC plasmids, an M13mp7 derived system for insertion mutagenesis and sequencing with synthetic universal primers
    • Vieira, J. and Messing, J. 1982. The pUC plasmids, an M13mp7 derived system for insertion mutagenesis and sequencing with synthetic universal primers. Gene 19: 259-268.
    • (1982) Gene , vol.19 , pp. 259-268
    • Vieira, J.1    Messing, J.2
  • 36
    • 0034671866 scopus 로고    scopus 로고
    • The origins of genomic duplications in Arabidopsis
    • Vision, T.J., Brown, D.G., and Tanksley, S.D. 2000. The origins of genomic duplications in Arabidopsis. Science 295: 2114-2117.
    • (2000) Science , vol.295 , pp. 2114-2117
    • Vision, T.J.1    Brown, D.G.2    Tanksley, S.D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.