-
1
-
-
33748922985
-
20S proteasomes and protein degradation "by default"
-
Asher G., Reuven N., and Shaul Y. 20S proteasomes and protein degradation "by default". Bioessays 28 (2006) 844-849
-
(2006)
Bioessays
, vol.28
, pp. 844-849
-
-
Asher, G.1
Reuven, N.2
Shaul, Y.3
-
2
-
-
33644857820
-
Genomic association of the proteasome demonstrates overlapping gene regulatory activity with transcription factor substrates
-
Auld K.L., Brown C.R., Casolari J.M., Komili S., and Silver P.A. Genomic association of the proteasome demonstrates overlapping gene regulatory activity with transcription factor substrates. Mol. Cell 21 (2006) 861-871
-
(2006)
Mol. Cell
, vol.21
, pp. 861-871
-
-
Auld, K.L.1
Brown, C.R.2
Casolari, J.M.3
Komili, S.4
Silver, P.A.5
-
3
-
-
21144450049
-
ATP hydrolysis-dependent disassembly of the 26S proteasome is part of the catalytic cycle
-
Babbitt S.E., Kiss A., Deffenbaugh A.E., Chang Y.H., Bailly E., Erdjument-Bromage H., Tempst P., Buranda T., Sklar L.A., Baumler J., et al. ATP hydrolysis-dependent disassembly of the 26S proteasome is part of the catalytic cycle. Cell 121 (2005) 553-565
-
(2005)
Cell
, vol.121
, pp. 553-565
-
-
Babbitt, S.E.1
Kiss, A.2
Deffenbaugh, A.E.3
Chang, Y.H.4
Bailly, E.5
Erdjument-Bromage, H.6
Tempst, P.7
Buranda, T.8
Sklar, L.A.9
Baumler, J.10
-
4
-
-
8844285955
-
20S proteasome differentially alters translation of different mRNAs via the cleavage of eIF4F and eIF3
-
Baugh J.M., and Pilipenko E.V. 20S proteasome differentially alters translation of different mRNAs via the cleavage of eIF4F and eIF3. Mol. Cell 16 (2004) 575-586
-
(2004)
Mol. Cell
, vol.16
, pp. 575-586
-
-
Baugh, J.M.1
Pilipenko, E.V.2
-
5
-
-
33748415010
-
A mechanism for coordinating chromatin modification and preinitiation complex assembly
-
Black J.C., Choi J.E., Lombardo S.R., and Carey M. A mechanism for coordinating chromatin modification and preinitiation complex assembly. Mol. Cell 23 (2006) 809-818
-
(2006)
Mol. Cell
, vol.23
, pp. 809-818
-
-
Black, J.C.1
Choi, J.E.2
Lombardo, S.R.3
Carey, M.4
-
6
-
-
25144525014
-
Core transcriptional regulatory circuitry in human embryonic stem cells
-
Boyer L.A., Lee T.I., Cole M.F., Johnstone S.E., Levine S.S., Zucker J.P., Guenther M.G., Kumar R.M., Murray H.L., Jenner R.G., et al. Core transcriptional regulatory circuitry in human embryonic stem cells. Cell 122 (2005) 947-956
-
(2005)
Cell
, vol.122
, pp. 947-956
-
-
Boyer, L.A.1
Lee, T.I.2
Cole, M.F.3
Johnstone, S.E.4
Levine, S.S.5
Zucker, J.P.6
Guenther, M.G.7
Kumar, R.M.8
Murray, H.L.9
Jenner, R.G.10
-
7
-
-
20444443164
-
Hyperacetylated chromatin domains: lessons from heterochromatin
-
Bulger M. Hyperacetylated chromatin domains: lessons from heterochromatin. J. Biol. Chem. 280 (2005) 21689-21692
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 21689-21692
-
-
Bulger, M.1
-
8
-
-
27744577727
-
Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription
-
Carrozza M.J., Li B., Florens L., Suganuma T., Swanson S.K., Lee K.K., Shia W.J., Anderson S., Yates J., Washburn M.P., and Workman J.L. Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription. Cell 123 (2005) 581-592
-
(2005)
Cell
, vol.123
, pp. 581-592
-
-
Carrozza, M.J.1
Li, B.2
Florens, L.3
Suganuma, T.4
Swanson, S.K.5
Lee, K.K.6
Shia, W.J.7
Anderson, S.8
Yates, J.9
Washburn, M.P.10
Workman, J.L.11
-
9
-
-
33644867538
-
The proteasome: a utility tool for transcription?
-
Collins G.A., and Tansey W.P. The proteasome: a utility tool for transcription?. Curr. Opin. Genet. Dev. 16 (2006) 197-202
-
(2006)
Curr. Opin. Genet. Dev.
, vol.16
, pp. 197-202
-
-
Collins, G.A.1
Tansey, W.P.2
-
10
-
-
0035947238
-
The 19S regulatory particle of the proteasome is required for efficient transcription elongation by RNA polymerase II
-
Ferdous A., Gonzalez F., Sun L., Kodadek T., and Johnston S.A. The 19S regulatory particle of the proteasome is required for efficient transcription elongation by RNA polymerase II. Mol. Cell 7 (2001) 981-991
-
(2001)
Mol. Cell
, vol.7
, pp. 981-991
-
-
Ferdous, A.1
Gonzalez, F.2
Sun, L.3
Kodadek, T.4
Johnston, S.A.5
-
11
-
-
0041590889
-
MYC recruits the TIP60 histone acetyltransferase complex to chromatin
-
Frank S.R., Parisi T., Taubert S., Fernandez P., Fuchs M., Chan H.M., Livingston D.M., and Amati B. MYC recruits the TIP60 histone acetyltransferase complex to chromatin. EMBO Rep. 4 (2003) 575-580
-
(2003)
EMBO Rep.
, vol.4
, pp. 575-580
-
-
Frank, S.R.1
Parisi, T.2
Taubert, S.3
Fernandez, P.4
Fuchs, M.5
Chan, H.M.6
Livingston, D.M.7
Amati, B.8
-
12
-
-
1942437536
-
Physical and functional association of RNA polymerase II and the proteasome
-
Gillette T.G., Gonzalez F., Delahodde A., Johnston S.A., and Kodadek T. Physical and functional association of RNA polymerase II and the proteasome. Proc. Natl. Acad. Sci. USA 101 (2004) 5904-5909
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 5904-5909
-
-
Gillette, T.G.1
Gonzalez, F.2
Delahodde, A.3
Johnston, S.A.4
Kodadek, T.5
-
13
-
-
21144447324
-
Molecular machines for protein degradation
-
Groll M., Bochtler M., Brandstetter H., Clausen T., and Huber R. Molecular machines for protein degradation. ChemBioChem 6 (2005) 222-256
-
(2005)
ChemBioChem
, vol.6
, pp. 222-256
-
-
Groll, M.1
Bochtler, M.2
Brandstetter, H.3
Clausen, T.4
Huber, R.5
-
14
-
-
0037073728
-
Involvement of proteasome in the dynamic assembly of the androgen receptor transcription complex
-
Kang Z., Pirskanen A., Janne O.A., and Palvimo J.J. Involvement of proteasome in the dynamic assembly of the androgen receptor transcription complex. J. Biol. Chem. 277 (2002) 48366-48371
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 48366-48371
-
-
Kang, Z.1
Pirskanen, A.2
Janne, O.A.3
Palvimo, J.J.4
-
15
-
-
27544486193
-
The proteasome regulatory particle alters the SAGA coactivator to enhance its interactions with transcriptional activators
-
Lee D., Ezhkova E., Li B., Pattenden S.G., Tansey W.P., and Workman J.L. The proteasome regulatory particle alters the SAGA coactivator to enhance its interactions with transcriptional activators. Cell 123 (2005) 423-436
-
(2005)
Cell
, vol.123
, pp. 423-436
-
-
Lee, D.1
Ezhkova, E.2
Li, B.3
Pattenden, S.G.4
Tansey, W.P.5
Workman, J.L.6
-
16
-
-
31044449824
-
The SRC-3/AIB1 coactivator is degraded in a ubiquitin- and ATP-independent manner by the REGgamma proteasome
-
Li X., Lonard D.M., Jung S.Y., Malovannaya A., Feng Q., Qin J., Tsai S.Y., Tsai M.J., and O'Malley B.W. The SRC-3/AIB1 coactivator is degraded in a ubiquitin- and ATP-independent manner by the REGgamma proteasome. Cell 124 (2006) 381-392
-
(2006)
Cell
, vol.124
, pp. 381-392
-
-
Li, X.1
Lonard, D.M.2
Jung, S.Y.3
Malovannaya, A.4
Feng, Q.5
Qin, J.6
Tsai, S.Y.7
Tsai, M.J.8
O'Malley, B.W.9
-
17
-
-
27744495040
-
A putative stimulatory role for activator turnover in gene expression
-
Lipford J.R., Smith G.T., Chi Y., and Deshaies R.J. A putative stimulatory role for activator turnover in gene expression. Nature 438 (2005) 113-116
-
(2005)
Nature
, vol.438
, pp. 113-116
-
-
Lipford, J.R.1
Smith, G.T.2
Chi, Y.3
Deshaies, R.J.4
-
19
-
-
0038820074
-
c-Myc transformation domain recruits the human STAGA complex and requires TRRAP and GCN5 acetylase activity for transcription activation
-
Liu X., Tesfai J., Evrard Y.A., Dent S.Y., and Martinez E. c-Myc transformation domain recruits the human STAGA complex and requires TRRAP and GCN5 acetylase activity for transcription activation. J. Biol. Chem. 278 (2003) 20405-20412
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 20405-20412
-
-
Liu, X.1
Tesfai, J.2
Evrard, Y.A.3
Dent, S.Y.4
Martinez, E.5
-
20
-
-
33745865934
-
Chromatin in pluripotent embryonic stem cells and differentiation
-
Meshorer E., and Misteli T. Chromatin in pluripotent embryonic stem cells and differentiation. Nat. Rev. Mol. Cell Biol. 7 (2006) 540-546
-
(2006)
Nat. Rev. Mol. Cell Biol.
, vol.7
, pp. 540-546
-
-
Meshorer, E.1
Misteli, T.2
-
21
-
-
2642544592
-
Estrogen receptor-alpha directs ordered, cyclical, and combinatorial recruitment of cofactors on a natural target promoter
-
Metivier R., Penot G., Hubner M.R., Reid G., Brand H., Kos M., and Gannon F. Estrogen receptor-alpha directs ordered, cyclical, and combinatorial recruitment of cofactors on a natural target promoter. Cell 115 (2003) 751-763
-
(2003)
Cell
, vol.115
, pp. 751-763
-
-
Metivier, R.1
Penot, G.2
Hubner, M.R.3
Reid, G.4
Brand, H.5
Kos, M.6
Gannon, F.7
-
22
-
-
17644427547
-
Mapping and functional analysis of regulatory sequences in the mouse lambda5-VpreB1 domain
-
Minaee S., Farmer D., Georgiou A., Sabbattini P., Webster Z., Chow C.M., and Dillon N. Mapping and functional analysis of regulatory sequences in the mouse lambda5-VpreB1 domain. Mol. Immunol. 42 (2005) 1283-1292
-
(2005)
Mol. Immunol.
, vol.42
, pp. 1283-1292
-
-
Minaee, S.1
Farmer, D.2
Georgiou, A.3
Sabbattini, P.4
Webster, Z.5
Chow, C.M.6
Dillon, N.7
-
23
-
-
0035962635
-
When the SWI/SNF complex remodels...the cell cycle
-
Muchardt C., and Yaniv M. When the SWI/SNF complex remodels...the cell cycle. Oncogene 20 (2001) 3067-3075
-
(2001)
Oncogene
, vol.20
, pp. 3067-3075
-
-
Muchardt, C.1
Yaniv, M.2
-
24
-
-
0842263778
-
The multicoloured world of promoter recognition complexes
-
Muller F., and Tora L. The multicoloured world of promoter recognition complexes. EMBO J. 23 (2004) 2-8
-
(2004)
EMBO J.
, vol.23
, pp. 2-8
-
-
Muller, F.1
Tora, L.2
-
25
-
-
17644386183
-
The F box protein Dsg1/Mdm30 is a transcriptional coactivator that stimulates Gal4 turnover and cotranscriptional mRNA processing
-
Muratani M., Kung C., Shokat K.M., and Tansey W.P. The F box protein Dsg1/Mdm30 is a transcriptional coactivator that stimulates Gal4 turnover and cotranscriptional mRNA processing. Cell 120 (2005) 887-899
-
(2005)
Cell
, vol.120
, pp. 887-899
-
-
Muratani, M.1
Kung, C.2
Shokat, K.M.3
Tansey, W.P.4
-
26
-
-
21744435965
-
Controlling nuclear receptors: the circular logic of cofactor cycles
-
Perissi V., and Rosenfeld M.G. Controlling nuclear receptors: the circular logic of cofactor cycles. Nat. Rev. Mol. Cell Biol. 6 (2005) 542-554
-
(2005)
Nat. Rev. Mol. Cell Biol.
, vol.6
, pp. 542-554
-
-
Perissi, V.1
Rosenfeld, M.G.2
-
27
-
-
20244389575
-
A dynamic switch in the replication timing of key regulator genes in embryonic stem cells upon neural induction
-
Perry P., Sauer S., Billon N., Richardson W.D., Spivakov M., Warnes G., Livesey F.J., Merkenschlager M., Fisher A.G., and Azuara V. A dynamic switch in the replication timing of key regulator genes in embryonic stem cells upon neural induction. Cell Cycle 3 (2004) 1645-1650
-
(2004)
Cell Cycle
, vol.3
, pp. 1645-1650
-
-
Perry, P.1
Sauer, S.2
Billon, N.3
Richardson, W.D.4
Spivakov, M.5
Warnes, G.6
Livesey, F.J.7
Merkenschlager, M.8
Fisher, A.G.9
Azuara, V.10
-
28
-
-
1542344435
-
Proteasomes and their kin: proteases in the machine age
-
Pickart C.M., and Cohen R.E. Proteasomes and their kin: proteases in the machine age. Nat. Rev. Mol. Cell Biol. 5 (2004) 177-187
-
(2004)
Nat. Rev. Mol. Cell Biol.
, vol.5
, pp. 177-187
-
-
Pickart, C.M.1
Cohen, R.E.2
-
29
-
-
4444234841
-
Sequential histone modifications at hoxd4 regulatory regions distinguish anterior from posterior embryonic compartments
-
Rastegar M., Kobrossy L., Kovacs E.N., Rambaldi I., and Featherstone M. Sequential histone modifications at hoxd4 regulatory regions distinguish anterior from posterior embryonic compartments. Mol. Cell. Biol. 24 (2004) 8090-8103
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 8090-8103
-
-
Rastegar, M.1
Kobrossy, L.2
Kovacs, E.N.3
Rambaldi, I.4
Featherstone, M.5
-
30
-
-
33745519094
-
Roles for APIS and the 20S proteasome in adenovirus E1A-dependent transcription
-
Rasti M., Grand R.J., Yousef A.F., Shuen M., Mymryk J.S., Gallimore P.H., and Turnell A.S. Roles for APIS and the 20S proteasome in adenovirus E1A-dependent transcription. EMBO J. 25 (2006) 2710-2722
-
(2006)
EMBO J.
, vol.25
, pp. 2710-2722
-
-
Rasti, M.1
Grand, R.J.2
Yousef, A.F.3
Shuen, M.4
Mymryk, J.S.5
Gallimore, P.H.6
Turnell, A.S.7
-
31
-
-
0037351881
-
Cyclic, proteasome-mediated turnover of unliganded and liganded ERalpha on responsive promoters is an integral feature of estrogen signaling
-
Reid G., Hubner M.R., Metivier R., Brand H., Denger S., Manu D., Beaudouin J., Ellenberg J., and Gannon F. Cyclic, proteasome-mediated turnover of unliganded and liganded ERalpha on responsive promoters is an integral feature of estrogen signaling. Mol. Cell 11 (2003) 695-707
-
(2003)
Mol. Cell
, vol.11
, pp. 695-707
-
-
Reid, G.1
Hubner, M.R.2
Metivier, R.3
Brand, H.4
Denger, S.5
Manu, D.6
Beaudouin, J.7
Ellenberg, J.8
Gannon, F.9
-
32
-
-
0036978961
-
Definition of transcriptional promoters in the human beta globin locus control region
-
Routledge S.J., and Proudfoot N.J. Definition of transcriptional promoters in the human beta globin locus control region. J. Mol. Biol. 323 (2002) 601-611
-
(2002)
J. Mol. Biol.
, vol.323
, pp. 601-611
-
-
Routledge, S.J.1
Proudfoot, N.J.2
-
33
-
-
14244255401
-
The lambda5-VpreB1 locus-a model system for studying gene regulation during early B cell development
-
Sabbattini P., and Dillon N. The lambda5-VpreB1 locus-a model system for studying gene regulation during early B cell development. Semin. Immunol. 17 (2005) 121-127
-
(2005)
Semin. Immunol.
, vol.17
, pp. 121-127
-
-
Sabbattini, P.1
Dillon, N.2
-
34
-
-
33748753648
-
Widespread, but non-identical, association of proteasomal 19 and 20 S proteins with yeast chromatin
-
Sikder D., Johnston S.A., and Kodadek T. Widespread, but non-identical, association of proteasomal 19 and 20 S proteins with yeast chromatin. J. Biol. Chem. 281 (2006) 27346-27355
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 27346-27355
-
-
Sikder, D.1
Johnston, S.A.2
Kodadek, T.3
-
35
-
-
20444428382
-
Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest
-
Somesh B.P., Reid J., Liu W.F., Sogaard T.M., Erdjument-Bromage H., Tempst P., and Svejstrup J.Q. Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest. Cell 121 (2005) 913-923
-
(2005)
Cell
, vol.121
, pp. 913-923
-
-
Somesh, B.P.1
Reid, J.2
Liu, W.F.3
Sogaard, T.M.4
Erdjument-Bromage, H.5
Tempst, P.6
Svejstrup, J.Q.7
-
36
-
-
25444482673
-
A new twist in the feedback loop: stress-activated MDM2 destabilization is required for p53 activation
-
Stommel J.M., and Wahl G.M. A new twist in the feedback loop: stress-activated MDM2 destabilization is required for p53 activation. Cell Cycle 4 (2005) 411-417
-
(2005)
Cell Cycle
, vol.4
, pp. 411-417
-
-
Stommel, J.M.1
Wahl, G.M.2
-
37
-
-
30444440701
-
The epigenetic basis for embryonic stem cell pluripotency
-
Szutorisz H., and Dillon N. The epigenetic basis for embryonic stem cell pluripotency. Bioessays 27 (2005) 1286-1293
-
(2005)
Bioessays
, vol.27
, pp. 1286-1293
-
-
Szutorisz, H.1
Dillon, N.2
-
38
-
-
14044259362
-
Formation of an active tissue-specific chromatin domain initiated by epigenetic marking at the embryonic stem cell stage
-
Szutorisz H., Canzonetta C., Georgiou A., Chow C.M., Tora L., and Dillon N. Formation of an active tissue-specific chromatin domain initiated by epigenetic marking at the embryonic stem cell stage. Mol. Cell. Biol. 25 (2005) 1804-1820
-
(2005)
Mol. Cell. Biol.
, vol.25
, pp. 1804-1820
-
-
Szutorisz, H.1
Canzonetta, C.2
Georgiou, A.3
Chow, C.M.4
Tora, L.5
Dillon, N.6
-
39
-
-
27544466462
-
The role of enhancers as centres for general transcription factor recruitment
-
Szutorisz H., Dillon N., and Tora L. The role of enhancers as centres for general transcription factor recruitment. Trends Biochem. Sci. 30 (2005) 593-599
-
(2005)
Trends Biochem. Sci.
, vol.30
, pp. 593-599
-
-
Szutorisz, H.1
Dillon, N.2
Tora, L.3
-
40
-
-
9644302474
-
Recruitment of transcription complexes to the beta-globin gene locus in vivo and in vitro
-
Vieira K.F., Levings P.P., Hill M.A., Crusselle V.J., Kang S.H., Engel J.D., and Bungert J. Recruitment of transcription complexes to the beta-globin gene locus in vivo and in vitro. J. Biol. Chem. 279 (2004) 50350-50357
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 50350-50357
-
-
Vieira, K.F.1
Levings, P.P.2
Hill, M.A.3
Crusselle, V.J.4
Kang, S.H.5
Engel, J.D.6
Bungert, J.7
-
41
-
-
0034685806
-
Analysis of a gene encoding Rpn10 of the fission yeast proteasome reveals that the polyubiquitin-binding site of this subunit is essential when Rpn12/Mts3 activity is compromised
-
Wilkinson C.R., Ferrell K., Penney M., Wallace M., Dubiel W., and Gordon C. Analysis of a gene encoding Rpn10 of the fission yeast proteasome reveals that the polyubiquitin-binding site of this subunit is essential when Rpn12/Mts3 activity is compromised. J. Biol. Chem. 275 (2000) 15182-15192
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 15182-15192
-
-
Wilkinson, C.R.1
Ferrell, K.2
Penney, M.3
Wallace, M.4
Dubiel, W.5
Gordon, C.6
-
42
-
-
0034626731
-
A transcription reinitiation intermediate that is stabilized by activator
-
Yudkovsky N., Ranish J.A., and Hahn S. A transcription reinitiation intermediate that is stabilized by activator. Nature 408 (2000) 225-229
-
(2000)
Nature
, vol.408
, pp. 225-229
-
-
Yudkovsky, N.1
Ranish, J.A.2
Hahn, S.3
|