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Volumn 63, Issue 1, 2007, Pages 97-108

Nine 3-ketoacyl-CoA thiolases (KATs) and acetoacetyl-CoA thiolases (ACATs) encoded by five genes in Arabidopsis thaliana are targeted either to peroxisomes or cytosol but not to mitochondria

Author keywords

oxidation; Mitochondria; Peroxisomes; Sub cellular localization; Thiolase

Indexed keywords

Β-OXIDATION; PEROXISOMES; SUB-CELLULAR LOCALIZATION; THIOLASE;

EID: 33845625275     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11103-006-9075-1     Document Type: Article
Times cited : (95)

References (56)
  • 1
    • 26844446044 scopus 로고    scopus 로고
    • Peroxisome protein import: Some answers, more questions
    • Baker A, Sparkes IA (2005) Peroxisome protein import: some answers, more questions. Curr Opin Plant Biol 8:640-647
    • (2005) Curr Opin Plant Biol , vol.8 , pp. 640-647
    • Baker, A.1    Sparkes, I.A.2
  • 2
    • 0036187913 scopus 로고    scopus 로고
    • Extensive feature detection of N-terminal protein sorting signals
    • Bannai H, Tamada Y, Maruyama O, Nakai K, Miyano S (2002) Extensive feature detection of N-terminal protein sorting signals. Bioinformatics 18:298-305
    • (2002) Bioinformatics , vol.18 , pp. 298-305
    • Bannai, H.1    Tamada, Y.2    Maruyama, O.3    Nakai, K.4    Miyano, S.5
  • 3
    • 0024710298 scopus 로고
    • Two genes encode the adenine nucleotide translocator of maize mitochondria. Isolation, characterisation and expression of the structural genes
    • Bathgate B, Baker A, Leaver CJ (1989) Two genes encode the adenine nucleotide translocator of maize mitochondria. Isolation, characterisation and expression of the structural genes. Eur J Biochem 183:303-310
    • (1989) Eur J Biochem , vol.183 , pp. 303-310
    • Bathgate, B.1    Baker, A.2    Leaver, C.J.3
  • 5
    • 0347823003 scopus 로고    scopus 로고
    • MatGAT: An application that generates similarity/identity matrices using protein or DNA sequences
    • Campanella JJ, Bitincka L, Smalley J (2003) MatGAT: an application that generates similarity/identity matrices using protein or DNA sequences. BMC Bioinform 4:29
    • (2003) BMC Bioinform , vol.4 , pp. 29
    • Campanella, J.J.1    Bitincka, L.2    Smalley, J.3
  • 6
    • 3042741092 scopus 로고    scopus 로고
    • Just read the message: A model for sorting of proteins between mitochondria and chloroplasts
    • Chew O, Whelan J (2004) Just read the message: a model for sorting of proteins between mitochondria and chloroplasts. Trends Plant Sci 9:318-319
    • (2004) Trends Plant Sci , vol.9 , pp. 318-319
    • Chew, O.1    Whelan, J.2
  • 7
    • 0346669752 scopus 로고    scopus 로고
    • Characterization of the targeting signal of dual-targeted pea glutathione reductase
    • Chew O, Rudhe C, Glaser E, Whelan J (2003) Characterization of the targeting signal of dual-targeted pea glutathione reductase. Plant Mol Biol 53:341-356
    • (2003) Plant Mol Biol , vol.53 , pp. 341-356
    • Chew, O.1    Rudhe, C.2    Glaser, E.3    Whelan, J.4
  • 8
    • 0029915525 scopus 로고    scopus 로고
    • Computational method to predict mitochondrially imported proteins and their targeting sequences
    • Claros MG, Vincens P (1996) Computational method to predict mitochondrially imported proteins and their targeting sequences. Eur J Biochem 241:779-786
    • (1996) Eur J Biochem , vol.241 , pp. 779-786
    • Claros, M.G.1    Vincens, P.2
  • 9
    • 0034724178 scopus 로고    scopus 로고
    • Random GFP::cDNA fusions enable visualization of subcellular structures in cells of Arabidopsis at a high frequency
    • Cutler SR, Ehrhardt DW, Griffitts JS, Somerville CR (2000) Random GFP::cDNA fusions enable visualization of subcellular structures in cells of Arabidopsis at a high frequency. Proc Natl Acad Sci USA 97:3718-3723
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 3718-3723
    • Cutler, S.R.1    Ehrhardt, D.W.2    Griffitts, J.S.3    Somerville, C.R.4
  • 10
    • 1242273641 scopus 로고    scopus 로고
    • Alanine:glyoxylate aminotransferase peroxisome-to-mitochondrion mistargeting in human hereditary kidney stone disease
    • Danpure CJ, Lumb MJ, Birdsey GM, Zhang X (2003) Alanine:glyoxylate aminotransferase peroxisome-to-mitochondrion mistargeting in human hereditary kidney stone disease. Biochim Biophys Acta 1647:70-75
    • (2003) Biochim Biophys Acta , vol.1647 , pp. 70-75
    • Danpure, C.J.1    Lumb, M.J.2    Birdsey, G.M.3    Zhang, X.4
  • 11
    • 0027332209 scopus 로고
    • Activities of the enzymes of the Ehrlich pathway and formation of branched-chain alcohols in Saccharomyces cerevisiae and Candida utilis grown in continuous culture on valine or ammonium as sole nitrogen source
    • Derrick S, Large PJ (1993) Activities of the enzymes of the Ehrlich pathway and formation of branched-chain alcohols in Saccharomyces cerevisiae and Candida utilis grown in continuous culture on valine or ammonium as sole nitrogen source. J Gen Microbiol 139:2783-2792
    • (1993) J Gen Microbiol , vol.139 , pp. 2783-2792
    • Derrick, S.1    Large, P.J.2
  • 13
    • 0034697980 scopus 로고    scopus 로고
    • Predicting subcellular localization of proteins based on their N-terminal amino acid sequence
    • Emanuelsson O, Nielsen H, Brunak S, von Heijne G (2000) Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. J Mol Biol 300:1005-1016
    • (2000) J Mol Biol , vol.300 , pp. 1005-1016
    • Emanuelsson, O.1    Nielsen, H.2    Brunak, S.3    Von Heijne, G.4
  • 14
    • 0038122825 scopus 로고    scopus 로고
    • In silico prediction of the peroxisomal proteome in fungi, plants and animals
    • Emanuelsson O, Elofsson A, von Heijne G, Cristobal S (2003) In silico prediction of the peroxisomal proteome in fungi, plants and animals. J Mol Biol 330:443-456
    • (2003) J Mol Biol , vol.330 , pp. 443-456
    • Emanuelsson, O.1    Elofsson, A.2    Von Heijne, G.3    Cristobal, S.4
  • 16
    • 0034102077 scopus 로고    scopus 로고
    • Isolation and characterization of cDNA clones for the e1beta and E2 subunits of the branched-chain alpha-ketoacid dehydrogenase complex in Arabidopsis
    • Fujiki Y, Sato T, Ito M, Watanabe A (2000) Isolation and characterization of cDNA clones for the e1beta and E2 subunits of the branched-chain alpha-ketoacid dehydrogenase complex in Arabidopsis. J Biol Chem 275:6007-6013
    • (2000) J Biol Chem , vol.275 , pp. 6007-6013
    • Fujiki, Y.1    Sato, T.2    Ito, M.3    Watanabe, A.4
  • 17
    • 18244368757 scopus 로고    scopus 로고
    • The clinical phenotype and outcome of mitochondrial acetoacetyl-CoA thiolase deficiency (β-ketothiolase or T2 deficiency) in 26 enzymatically proved and mutation-defined patients
    • Fukao T, Scriver CR, Kondo N (2001) The clinical phenotype and outcome of mitochondrial acetoacetyl-CoA thiolase deficiency (β-ketothiolase or T2 deficiency) in 26 enzymatically proved and mutation-defined patients. Mol Genet Metab 72:109-114
    • (2001) Mol Genet Metab , vol.72 , pp. 109-114
    • Fukao, T.1    Scriver, C.R.2    Kondo, N.3
  • 18
    • 0034782175 scopus 로고    scopus 로고
    • Requirement for 3-ketoacyl-CoA thiolase-2 in peroxisome development, fatty acid β-oxidation and breakdown of triacylglycerol in lipid bodies of Arabidopsis seedlings
    • Germain V, Rylott EL, Larson TR, Sherson SM, Bechtold N, Carde JP, Bryce JH, Graham IA, Smith SM (2001) Requirement for 3-ketoacyl-CoA thiolase-2 in peroxisome development, fatty acid β-oxidation and breakdown of triacylglycerol in lipid bodies of Arabidopsis seedlings. Plant J 28:1-12
    • (2001) Plant J , vol.28 , pp. 1-12
    • Germain, V.1    Rylott, E.L.2    Larson, T.R.3    Sherson, S.M.4    Bechtold, N.5    Carde, J.P.6    Bryce, J.H.7    Graham, I.A.8    Smith, S.M.9
  • 19
    • 0036138649 scopus 로고    scopus 로고
    • Pathways of straight and branched chain fatty acid catabolism in higher plants
    • Graham IA, Eastmond PJ (2002) Pathways of straight and branched chain fatty acid catabolism in higher plants. Prog Lipid Res 41:156-181
    • (2002) Prog Lipid Res , vol.41 , pp. 156-181
    • Graham, I.A.1    Eastmond, P.J.2
  • 20
    • 0842270043 scopus 로고    scopus 로고
    • Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins
    • Heazlewood JL, Tonti-Filippini JS, Gout AM, Day DA, Whelan J, Millar AH (2004) Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Plant Cell 16:241-256
    • (2004) Plant Cell , vol.16 , pp. 241-256
    • Heazlewood, J.L.1    Tonti-Filippini, J.S.2    Gout, A.M.3    Day, D.A.4    Whelan, J.5    Millar, A.H.6
  • 21
    • 33644649331 scopus 로고    scopus 로고
    • Combining experimental and predicted datasets for determination of the subcellular location of proteins in Arabidopsis
    • Heazlewood JL, Tonti-Filippini J, Verboom RE, Millar AH (2005) Combining experimental and predicted datasets for determination of the subcellular location of proteins in Arabidopsis. Plant Physiol 139:598-609
    • (2005) Plant Physiol , vol.139 , pp. 598-609
    • Heazlewood, J.L.1    Tonti-Filippini, J.2    Verboom, R.E.3    Millar, A.H.4
  • 22
    • 0742296043 scopus 로고    scopus 로고
    • Molecular biology, enzymology, and physiology of β-oxidation
    • Baker A, Graham I (eds) Kluwer Academic Publishers, London
    • Hooks MA (2002) Molecular biology, enzymology, and physiology of β-oxidation. In: Baker A, Graham I (eds) Plant peroxisomes. Kluwer Academic Publishers, London, pp 19-55
    • (2002) Plant Peroxisomes , pp. 19-55
    • Hooks, M.A.1
  • 23
    • 0034843744 scopus 로고    scopus 로고
    • Support vector machine approach for protein subcellular localization prediction
    • Hua S, Sun Z (2001) Support vector machine approach for protein subcellular localization prediction. Bioinformatics 17:721-728
    • (2001) Bioinformatics , vol.17 , pp. 721-728
    • Hua, S.1    Sun, Z.2
  • 24
    • 0346421412 scopus 로고    scopus 로고
    • Import of the peroxisomal targeting signal type 2 protein 3-ketoacyl-coenzyme a thiolase into glyoxysomes
    • Johnson TL, Olsen LJ (2003) Import of the peroxisomal targeting signal type 2 protein 3-ketoacyl-coenzyme a thiolase into glyoxysomes. Plant Physiol 133:1991-1999
    • (2003) Plant Physiol , vol.133 , pp. 1991-1999
    • Johnson, T.L.1    Olsen, L.J.2
  • 26
    • 33644839692 scopus 로고    scopus 로고
    • Arabidopsis thaliana subcellular responses to compatible Erysiphe cichoracearum infections
    • Koh S, Andre A, Edwards H, Ehrhardt D, Somerville S (2005) Arabidopsis thaliana subcellular responses to compatible Erysiphe cichoracearum infections. Plant J 44:516-529
    • (2005) Plant J , vol.44 , pp. 516-529
    • Koh, S.1    Andre, A.2    Edwards, H.3    Ehrhardt, D.4    Somerville, S.5
  • 27
    • 85047683107 scopus 로고    scopus 로고
    • Proteomic approach to identify novel mitochondrial proteins in Arabidopsis
    • Kruft V, Eubel H, Jansch L, Werhahn W, Braun HP (2001) Proteomic approach to identify novel mitochondrial proteins in Arabidopsis. Plant Physiol 127:1694-1710
    • (2001) Plant Physiol , vol.127 , pp. 1694-1710
    • Kruft, V.1    Eubel, H.2    Jansch, L.3    Werhahn, W.4    Braun, H.P.5
  • 28
    • 33646852452 scopus 로고    scopus 로고
    • Prediction of mitochondrial proteins using support vector machine and hidden markov model
    • Kumar M, Verma R, Raghava GP (2006) Prediction of mitochondrial proteins using support vector machine and hidden markov model. J Biol Chem 281:5357-5363
    • (2006) J Biol Chem , vol.281 , pp. 5357-5363
    • Kumar, M.1    Verma, R.2    Raghava, G.P.3
  • 29
    • 3342962408 scopus 로고    scopus 로고
    • An Arabidopsis mutant disrupted in valine catabolism is also compromised in peroxisomal fatty acid β-oxidation
    • Lange PR, Eastmond PJ, Madagan K, Graham IA (2004) An Arabidopsis mutant disrupted in valine catabolism is also compromised in peroxisomal fatty acid β-oxidation. FEBS Lett 571:147-153
    • (2004) FEBS Lett , vol.571 , pp. 147-153
    • Lange, P.R.1    Eastmond, P.J.2    Madagan, K.3    Graham, I.A.4
  • 30
    • 3442891848 scopus 로고    scopus 로고
    • Identification of signals required for import of the soybean F(A)d subunit of ATP synthase into mitochondria
    • Lee MN, Whelan J (2004) Identification of signals required for import of the soybean F(A)d subunit of ATP synthase into mitochondria. Plant Mol Biol 54:193-203
    • (2004) Plant Mol Biol , vol.54 , pp. 193-203
    • Lee, M.N.1    Whelan, J.2
  • 31
    • 1342265924 scopus 로고    scopus 로고
    • A transcriptomic and proteomic characterization of the Arabidopsis mitochondrial protein import apparatus and its response to mitochondrial dysfunction
    • Lister R, Chew O, Lee MN, Heazlewood JL, Clifton R, Parker KL, Millar AH, Whelan J (2004) A transcriptomic and proteomic characterization of the Arabidopsis mitochondrial protein import apparatus and its response to mitochondrial dysfunction. Plant Physiol 134:777-789
    • (2004) Plant Physiol , vol.134 , pp. 777-789
    • Lister, R.1    Chew, O.2    Lee, M.N.3    Heazlewood, J.L.4    Clifton, R.5    Parker, K.L.6    Millar, A.H.7    Whelan, J.8
  • 32
    • 0035934623 scopus 로고    scopus 로고
    • Mitochondrial and peroxisomal β-oxidation capacities of organs from a non-oilseed plant
    • Masterson C, Wood C (2001) Mitochondrial and peroxisomal β-oxidation capacities of organs from a non-oilseed plant. Proc Biol Sci 268:1949-1953
    • (2001) Proc Biol Sci , vol.268 , pp. 1949-1953
    • Masterson, C.1    Wood, C.2
  • 34
    • 7444242630 scopus 로고    scopus 로고
    • The N-terminal extension of plant mitochondrial carrier proteins is removed by two-step processing: The first cleavage is by the mitochondrial processing peptidase
    • Murcha MW, Elhafez D, Millar AH, Whelan J (2004) The N-terminal extension of plant mitochondrial carrier proteins is removed by two-step processing: the first cleavage is by the mitochondrial processing peptidase. J Mol Biol 344:443-454
    • (2004) J Mol Biol , vol.344 , pp. 443-454
    • Murcha, M.W.1    Elhafez, D.2    Millar, A.H.3    Whelan, J.4
  • 35
    • 22044435517 scopus 로고    scopus 로고
    • The N-terminal cleavable extension of plant carrier proteins is responsible for efficient insertion into the inner mitochondrial membrane
    • Murcha MW, Millar AH, Whelan J (2005) The N-terminal cleavable extension of plant carrier proteins is responsible for efficient insertion into the inner mitochondrial membrane. J Mol Biol 351:16-25
    • (2005) J Mol Biol , vol.351 , pp. 16-25
    • Murcha, M.W.1    Millar, A.H.2    Whelan, J.3
  • 37
    • 23944508511 scopus 로고    scopus 로고
    • Phylogenetic analysis of eukaryotic thiolases suggests multiple proteobacterial origins
    • Pereto J, Lopez-Garcia P, Moreira D (2005) Phylogenetic analysis of eukaryotic thiolases suggests multiple proteobacterial origins. J Mol Evol 61:65-74
    • (2005) J Mol Evol , vol.61 , pp. 65-74
    • Pereto, J.1    Lopez-Garcia, P.2    Moreira, D.3
  • 39
    • 0030787877 scopus 로고    scopus 로고
    • Isolation and characterization of an amino acid-selective channel protein present in the chloroplastic outer envelope membrane
    • Pohlmeyer K, Soll J, Steinkamp T, Hinnah S, Wagner R (1997) Isolation and characterization of an amino acid-selective channel protein present in the chloroplastic outer envelope membrane. Proc Natl Acad Sci USA 94:9504-9509
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 9504-9509
    • Pohlmeyer, K.1    Soll, J.2    Steinkamp, T.3    Hinnah, S.4    Wagner, R.5
  • 40
    • 33644802667 scopus 로고    scopus 로고
    • Arabidopsis peroxisomal citrate synthase is required for fatty acid respiration and seed germination
    • Pracharoenwattana I, Cornah JE, Smith SM (2005) Arabidopsis peroxisomal citrate synthase is required for fatty acid respiration and seed germination. Plant Cell 17:2037-2048
    • (2005) Plant Cell , vol.17 , pp. 2037-2048
    • Pracharoenwattana, I.1    Cornah, J.E.2    Smith, S.M.3
  • 41
    • 0033548261 scopus 로고    scopus 로고
    • The preprotein translocase of the mitochondrial inner membrane: Function and evolution
    • Rassow J, Dekker PJ, van Wilpe S, Meijer M, Soll J (1999) The preprotein translocase of the mitochondrial inner membrane: function and evolution. J Mol Biol 286:105-120
    • (1999) J Mol Biol , vol.286 , pp. 105-120
    • Rassow, J.1    Dekker, P.J.2    Van Wilpe, S.3    Meijer, M.4    Soll, J.5
  • 43
    • 2942589051 scopus 로고    scopus 로고
    • Predotar: A tool for rapidly screening proteomes for N-terminal targeting sequences
    • Small I, Peeters N, Legeai F, Lurin C (2004) Predotar: a tool for rapidly screening proteomes for N-terminal targeting sequences. Proteomics 4:1581-1590
    • (2004) Proteomics , vol.4 , pp. 1581-1590
    • Small, I.1    Peeters, N.2    Legeai, F.3    Lurin, C.4
  • 44
    • 0035080417 scopus 로고    scopus 로고
    • Protein import into plant mitochondria: Precursor proteins differ in ATP and membrane potential requirements
    • Tanudji M, Dessi P, Murcha M, Whelan J (2001) Protein import into plant mitochondria: precursor proteins differ in ATP and membrane potential requirements. Plant Mol Biol 45:317-325
    • (2001) Plant Mol Biol , vol.45 , pp. 317-325
    • Tanudji, M.1    Dessi, P.2    Murcha, M.3    Whelan, J.4
  • 45
    • 1342287231 scopus 로고    scopus 로고
    • Lipoic acid-dependent oxidative catabolism of alpha-keto acids in mitochondria provides evidence for branched-chain amino acid catabolism in Arabidopsis
    • Taylor NL, Heazlewood JL, Day DA, Millar AH (2004) Lipoic acid-dependent oxidative catabolism of alpha-keto acids in mitochondria provides evidence for branched-chain amino acid catabolism in Arabidopsis. Plant Physiol 134:838-848
    • (2004) Plant Physiol , vol.134 , pp. 838-848
    • Taylor, N.L.1    Heazlewood, J.L.2    Day, D.A.3    Millar, A.H.4
  • 47
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673-4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 48
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 50
    • 22044437388 scopus 로고    scopus 로고
    • The botany array resource: e-Northerns, expression angling, and promoter analyses
    • Toufighi K, Brady SM, Austin R, Ly E, Provart NJ (2005) The botany array resource: e-Northerns, expression angling, and promoter analyses. Plant J 43:153-163
    • (2005) Plant J , vol.43 , pp. 153-163
    • Toufighi, K.1    Brady, S.M.2    Austin, R.3    Ly, E.4    Provart, N.J.5
  • 53
    • 0029240442 scopus 로고
    • Studies on the import and processing of the alternative oxidase precursor by isolated soybean mitochondria
    • Whelan J, Hugosson M, Glaser E, Day DA (1995) Studies on the import and processing of the alternative oxidase precursor by isolated soybean mitochondria. Plant Mol Biol 27:769-778
    • (1995) Plant Mol Biol , vol.27 , pp. 769-778
    • Whelan, J.1    Hugosson, M.2    Glaser, E.3    Day, D.A.4
  • 54
    • 0026920782 scopus 로고
    • The adenine nucleotide translocator of higher plants is synthesized as a large precursor that is processed upon import into mitochondria
    • Winning BM, Sarah CJ, Purdue PE, Day CD, Leaver CJ (1992) The adenine nucleotide translocator of higher plants is synthesized as a large precursor that is processed upon import into mitochondria. Plant J 2:763-773
    • (1992) Plant J , vol.2 , pp. 763-773
    • Winning, B.M.1    Sarah, C.J.2    Purdue, P.E.3    Day, C.D.4    Leaver, C.J.5
  • 56
    • 13444264729 scopus 로고    scopus 로고
    • Arabidopsis microarray database and analysis toolbox
    • GENEVESTIGATOR
    • Zimmermann P, Hirsch-Hoffmann M, Hennig L, Gruissem W (2004) GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox. Plant Physiol 136:2621-2632
    • (2004) Plant Physiol , vol.136 , pp. 2621-2632
    • Zimmermann, P.1    Hirsch-Hoffmann, M.2    Hennig, L.3    Gruissem, W.4


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