A putative Arabidopsis nucleoporin, AtNUP160, is critical for RNA export and required for plant tolerance to cold stress

Molecular and Cellular Biology

Volumn 26, Issue 24, 2006, Pages 9533-9543

  Dong, Chun Hai ^a,b   Hu, Xiangyang ^a   Tang, Weiping ^a   Zheng, Xianwu ^a   Yong, Sig Kim ^b   Lee, Byeong Ha ^b   Zhu, Jian Kang ^a,b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF ARIZONA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS PROTEIN; MESSENGER RNA; NUCLEOPORIN; NUCLEOPORIN 160; PLANT RNA; POLYADENYLATED RNA;

ARABIDOPSIS; ARTICLE; ATNUP160 1 GENE; CBF GENE; CBF3 LUC GENE; CELL NUCLEUS; COLD STRESS; COLD TOLERANCE; CONTROLLED STUDY; FLOWER DEVELOPMENT; GENE; GENE EXPRESSION REGULATION; GENE INDUCTION; GENETIC ANALYSIS; GENETIC SCREENING; GENETIC TRANSCRIPTION; MOLECULAR CLONING; MUTATIONAL ANALYSIS; NONHUMAN; NUCLEOCYTOPLASMIC TRANSPORT; PLANT GENETICS; PRIORITY JOURNAL; PROTEIN FUNCTION; PROTEIN RNA BINDING; REPORTER GENE; RNA TRANSPORT; TEMPERATURE SENSITIVITY;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; CELL NUCLEUS; COLD; CYTOPLASM; FLOWERING TOPS; GENE EXPRESSION REGULATION, PLANT; MUTATION; NUCLEAR PORE COMPLEX PROTEINS; RNA TRANSPORT; RNA, MESSENGER; RNA, PLANT; STRESS;

ANIMALIA; ARABIDOPSIS; ARABIDOPSIS THALIANA;

EID: 33845420384     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.01063-06     Document Type: Article

References (36)

1. Chinnusamy, V., M. Ohta, S. Kanrar, B. H. Lee, X. Hong, M. Agarwal, and J. K. Zhu. 2003. ICE1: a regulator of cold-induced transcriptome and freezing tolerance in Arabidopsis. Genes Dev. 17:1043-1054.
2. Dong, C. H., B. Kost, G. Xia, and N. H. Chua. 2001. Molecular identification and characterization of the Arabidopsis AtADF1, AtADF5 and AtADF6 genes. Plant Mol. Biol. 45:517-527.
3. Dong, C. H., M. Agarwal, Y. Zhang, Q. Xie, and J. K. Zhu. 2006. The negative regulator of plant cold responses, HOS1, is a RING E3 ligase that mediates the ubiquitination and degradation of ICE1. Proc. Natl. Acad. Sci. USA 103:8281-8286.
4. Fahrenkrog, B., J. Koser, and U. Aebi. 2004. The nuclear pore complex: a jack of all trades? Trends Biochem. Sci. 29:175-182.
5. Gilmour, S. J., N. N. Artus, and M. F. Thomashow. 1992. cDNA sequence analysis and expression of two cold-regulated genes of Arabidopsis thaliana. Plant Mol. Biol. 18:13-32.
6. Gilmour, S. J., D. G. Zarka, E. J. Stockinger, M. P. Salazar, J. M. Houghton, and M. F. Thomashow. 1998. Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression. Plant J. 16:433-442.
7. Gilmour, S. J., A. M. Sebolt, M. P. Salazar, J. D. Everard, and M. F. Thomashow. 2000. Overexpression of the Arabidopsis CBF3 transcriptional activator mimics multiple biochemical changes associated with cold acclimation. Plant Physiol. 124:1854-1865.
8. Gong, Z., C. H. Dong, H. Lee, J. Zhu, L. Xiong, D. Gong, B. Stevenson, and J. K. Zhu. 2005. A DEAD box RNA helicase is essential for mRNA export and important for development and stress responses in Arabidopsis. Plant Cell 17:256-267.
9. Gong, Z., H. Lee, L. Xiong, A. Jagendorf, B. Stevenson, and J. K. Zhu. 2002. RNA helicase-like protein as an early regulator of transcription factors for plant chilling and freezing tolerance. Proc. Natl. Acad. Sci. USA 99:11507-11512.
10. Gorlich, D., and U. Kutay. 1999. Transport between the cell nucleus and the cytoplasm. Annu. Rev. Cell Dev. Biol. 15:607-660.
11. Guo, Y., L. Xiong, M. Ishitani, and J. K. Zhu. 2002. An Arabidopsis mutation in translation elongation factor 2 causes superinduction of CBF/DREB1 transcription factor genes but blocks the induction of their downstream targets under low temperature. Proc. Natl. Acad. Sci. USA 99:7786-7791.
12. Harel, A., A. V. Orjalo, T. Vincent, A. Lachish-Zalait, S. Vasu, S. Shah, E. Zimmerman, M. Elbaum, and D. J. Forbes. 2003. Removal of a single pore subcomplex results in vertebrate nuclei devoid of nuclear pores. Mol. Cell 11:853-864.
13. Ishitani, M., L. Xiong, H. J. Lee, B. Stevenson, and J. K. Zhu. 1998. HOS1, a genetic locus involved in cold-responsive gene expression in Arabidopsis. Plant Cell 10:1151-1161.
14. Jaglo-Ottosen, K. R., S. J. Gilmour, D. G. Zarka, O. Schabenberger, and M. F. Thomashow. 1998. Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance. Science 280:104-106.
15. Kagan, V. E. 1988. Lipid peroxidation in biomembranes. CRC Press, Boca Raton, Fla.
16. Kasuga, M., Q. Liu, S. Miura, K. Yamaguchi-Shinozaki, and K. Shinozaki. 1999. Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor. Nat. Biotechnol. 17:287-291.
17. Lee, B. H., D. A. Henderson, and J. K. Zhu. 2005. The Arabidopsis cold-responsive transcriptome and its regulation by ICE1. Plant Cell 17:3155-3175.
18. Lee, H., Y. Guo, M. Ohta, L. Xiong, B. Stevenson, and J. K. Zhu. 2002. LOS2, a genetic locus required for cold-responsive gene transcription encodes a bifunctional enolase. EMBO J. 21:2692-2702.
19. Lee, H., L. Xiong, Z. Gong, M. Ishitani, B. Stevenson, and J. K. Zhu. 2001. The Arabidopsis HOS1 gene negatively regulates cold signal transduction and encodes a RING finger protein that displays cold-regulated nucleocytoplasmic partitioning. Genes Dev. 15:912-924.
20. Levitt, J. 1980. Responses of plants to environmental stress, vol. 1: chilling, freezing, and high temperature stress. Academic Press, New York, N.Y.
21. Liu, Q., M. Kasuga, Y. Sakuma, H. Abe, S. Miura, K. Yamaguchi-Shinozaki, and K. Shinozaki. 1998. Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought- and low-temperature-responsive gene expression, respectively, in Arabidopsis. Plant Cell 10:1391-1406.
22. Medina, J., M. Bargues, J. Terol, M. Perez-Alonso, and J. Salinas. 1999. The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression is regulated by low temperature but not by abscisic acid or dehydration. Plant Physiol. 119:463-470.
23. Nishida, I., and N. Murata. 1996. Chilling sensitivity in plants and cyanobacteria: the crucial contribution of membrane lipids. Annu. Rev. Plant Physiol. Plant Mol. Biol. 47:541-568.
24. Nordin, K., T. Vahala, and E. T. Palva. 1993. Differential expression of two related, low-temperature-induced genes in Arabidopsis thaliana (L.) Heynh. Plant Mol. Biol. 21:641-653.
25. Parry, G., S. Ward, A. Cernac, S. Dharmasiri, and M. Estelle. 2006. The Arabidopsis suppressor of auxin resistance proteins are nucleoporins with an important role in hormone signaling and development. Plant Cell 18:1590-1603.
26. Rout, M. P., J. D. Aitchison, A. Suprapto, K. Hjertaas, Y. Zhao, and B. T. Chait. 2000. The yeast nuclear pore complex: composition, architecture, and transport mechanism. J. Cell Biol. 148:635-651.
27. Stockinger, E. J., S. J. Gilmour, and M. F. Thomashow. 1997. Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit. Proc. Natl. Acad. Sci. USA 94:1035-1040.
28. Tokuhisa, J., and J. Browse. 1999. Genetic engineering of plant chilling tolerance. Genet. Eng. (New York) 21:79-93.
29. Tokuhisa, J. G., P. Vijayan, K A. Feldmann, and J. A. Browse. 1998. Chloroplast development at low temperatures requires a homolog of DIM1, a yeast gene encoding the 18S rRNA dimethylase. Plant Cell 10:699-711.
30. Vasu, S., S. Shah, A. Orjalo, M. Park, W. H. Fischer, and D. J. Forbes. 2001. Novel vertebrate nucleoporins Nup133 and Nup160 play a role in mRNA export. J. Cell Biol. 155:339-354.
31. Walther, T. C., A. Alves, H. Pickersgill, I. Loiodice, M. Hetzer, V. Galy, B. B. Hulsmann, T. Kocher, M. Wilm, T. Allen, I. W. Mattaj, and V. Doye. 2003. The conserved Nup107-160 complex is critical for nuclear pore complex assembly. Cell 113:195-206.
32. Wanner, L. A., and O. Junttila. 1999. Cold-induced freezing tolerance in Arabidopsis. Plant Physiol. 120:391-400.
33. Yamaguchi-Shinozaki, K., and K. Shinozaki. 1994. A novel cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or high-salt stress. Plant Cell 6:251-264.
34. Zhang, Y., and X. Li. 2005. A putative nucleoporin 96 is required for both basal defense and constitutive resistance responses mediated by suppressor of npr1-1, constitutive 1. Plant Cell 17:1306-1316.
35. Zhu, J., H. Shi, B. H. Lee, B. Damsz, S. Cheng, V. Stirm, J. K. Zhu, P. M. Hasegawa, and R. A. Bressan. 2004. An Arabidopsis homeodomain transcription factor gene, HOS9, mediates cold tolerance through a CBF-independent pathway. Proc. Natl. Acad. Sci. USA 101:9873-9878.
36. Zhu, J., P. E. Verslues, X. Zheng, B. H. Lee, X. Zhan, Y. Manabe, Y. Zhu, C. H. Dong, J. K. Zhu, P. M. Hasegawa, and R. A. Bressan. 2005. HOS10 encodes an R2R3-type MYB transcription factor essential for cold acclimation in plants. Proc. Natl. Acad. Sci. USA 102:9966-9971.