Pathogen-associated gene expression profiles in rainbow trout macrophages

Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics

Volumn 1, Issue 4, 2006, Pages 416-422

  Iliev, Dimitar B ^a,b   Goetz, Giles W ^a   MacKenzie, Simon ^c   Planas, Josep V ^d   Goetz, Frederick W ^a  

^a UNIVERSITY OF WISCONSIN MILWAUKEE   (United States)

^b UNIVERSITY OF NOTRE DAME   (United States)

^c UNIVERSITAT AUTÒNOMA DE BARCELONA   (Spain)

^d UNIVERSITY OF BARCELONA   (Spain)

Author keywords

Gene expression; Lipopolysaccharide; Macrophage; Pathogen associated molecular patterns; Poly(I:C); Rainbow trout; Zymosan

Indexed keywords

CYSTEINE AND GLYCINE RICH PROTEIN 1; DNA DAMAGE INDUCIBLE TRANSCRIPT 4 LIKE PROTEIN; DUAL SPECIFICITY PHOSPHATE 6; ESCHERICHIA COLI LIPOPOLYSACCHARIDE; GENE PRODUCT; HIGH MOBILITY GROUP B1 PROTEIN; INHIBITOR OF DNA BINDING DIFFERENTIATION 2B PROTEIN; LOW MOLECULAR MASS POLYPEPTIDE COMPLEX SUBUNIT 2; POLYINOSINIC POLYCYTIDYLIC ACID; SERINE PROTEINASE INHIBITOR KUNITZ TYPE 1 LIKE PROTEIN; TUMOR NECROSIS FACTOR ALPHA INDUCED PROTEIN 3; TUMOR NECROSIS FACTOR INDUCED ADIPOSE RELATED PROTEIN; UNCLASSIFIED DRUG; ZYMOSAN;

ANIMAL CELL; ARTICLE; CELL STIMULATION; CONTROLLED STUDY; FUNGUS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE IDENTIFICATION; GENE LIBRARY; GRAM NEGATIVE BACTERIUM; MACROPHAGE; MACROPHAGE ACTIVATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; RAINBOW TROUT; REAL TIME POLYMERASE CHAIN REACTION; TRANSCRIPTION REGULATION; UPREGULATION; VIRUS;

FUNGI; NEGIBACTERIA; ONCORHYNCHUS MYKISS; SALMONIDAE;

EID: 33751415088     PISSN: 1744117X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cbd.2006.10.003     Document Type: Article

References (48)

1. Barbour S.E., Wong C., Rabah D., Kapur A., and Carter A.D. Mature macrophage cell lines exhibit variable responses to LPS. Mol. Immunol. 35 (1998) 977-987
2. Bhullar B.S., Hewitt J., and Candido E.P. The large high mobility group proteins of rainbow trout are localized predominantly in the nucleus and nucleoli of a cultured trout cell line. J. Biol. Chem. 256 (1981) 8801-8806
3. Bilodeau A.L., and Waldbieser G.C. Activation of TLR3 and TLR5 in channel catfish exposed to virulent Edwardsiella ictaluri. Dev. Comp. Immunol. 29 (2005) 713-721
4. Bilodeau A.L., Peterson B.C., and Bosworth B.G. Response of toll-like receptors, lysozyme, and IGF-I in back-cross hybrid (F1 male (blue x channel) x female channel) catfish challenged with virulent Edwardsiella ictaluri. Fish Shellfish Immunol. 20 (2006) 29-39
5. Chitu V., Pixley F.J., Macaluso F., Larson D.R., Condeelis J., Yeung Y.G., and Stanley E.R. The PCH family member MAYP/PSTPIP2 directly regulates F-actin bundling and enhances filopodia formation and motility in macrophages. Mol. Biol. Cell 16 (2005) 2947-2959
6. Chong S.W., Nguyen T.T., Chu L.T., Jiang Y.J., and Korzh V. Zebrafish id2 developmental expression pattern contains evolutionary conserved and species-specific characteristics. Dev. Dyn. 234 (2005) 1055-1063
7. Dixit V.M., Green S., Sarma V., Holzman L.B., Wolf F.W., O'Rourke K., Ward P.A., Prochownik E.V., and Marks R.M. Tumor necrosis factor-alpha induction of novel gene products in human endothelial cells including a macrophage-specific chemotaxin. J. Biol. Chem. 265 (1990) 2973-2978
8. Dumitriu I.E., Baruah P., Manfredi A.A., Bianchi M.E., and Rovere-Querini P. HMGB1: guiding immunity from within. Trends Immunol. 26 (2005) 381-387
9. Fasshauer M., Kralisch S., Klier M., Lossner U., Bluher M., Chambaut-Guerin A.M., Klein J., and Paschke R. Interleukin-6 is a positive regulator of tumor necrosis factor alpha-induced adipose-related protein in 3T3-L1 adipocytes. FEBS Lett. 560 (2004) 153-157
10. Fukui A., Inoue N., Matsumoto M., Nomura M., Yamada K., Matsuda Y., Toyoshima K., and Seya T. Molecular cloning and functional characterization of chicken toll-like receptors. A single chicken toll covers multiple molecular patterns. J. Biol. Chem. 276 (2001) 47143-47149
11. Gahr S.A., Rodriguez M.F., and Rexroad III C.E. Identification and expression profile of the ID gene family in the rainbow trout (Oncorhynchus mykiss). Biochim. Biophys. Acta 1729 (2005) 64-73
12. Goetz F.W., Iliev D.B., McCauley L.A., Liarte C.Q., Tort L.B., Planas J.V., and Mackenzie S. Analysis of genes isolated from lipopolysaccharide-stimulated rainbow trout (Oncorhynchus mykiss) macrophages. Mol. Immunol. 41 (2004) 1199-1210
13. Groom L.A., Sneddon A.A., Alessi D.R., Dowd S., and Keyse S.M. Differential regulation of the MAP, SAP and RK/p38 kinases by Pyst1, a novel cytosolic dual-specificity phosphatase. EMBO J. 15 (1996) 3621-3632
14. Guillet F., Tournefier A., Denoulet P., Capony J.P., Kerfourn F., and Charlemagne J. High levels of HMG1-2 protein expression in the cytoplasm and nucleus of hydrocortisone sensitive amphibian thymocytes. Biol. Cell 69 (1990) 153-160
15. Hansen J.D., Strassburger P., Thorgaard G.H., Young W.P., and Du Pasquier L. Expression, linkage, and polymorphism of MHC-related genes in rainbow trout, Oncorhynchus mykiss. J. Immunol. 163 (1999) 774-786
16. Hayashi F., Smith K.D., Ozinsky A., Hawn T.R., Yi E.C., Goodlett D.R., Eng J.K., Akira S., Underhill D.M., and Aderem A. The innate immune response to bacterial flagellin is mediated by Toll-like receptor 5. Nature 410 (2001) 1099-1103
17. Heyninck K., and Beyaert R. The cytokine-inducible zinc finger protein A20 inhibits IL-1-induced NF-kappaB activation at the level of TRAF6. FEBS Lett. 442 (1999) 147-150
18. Iliev D.B., Liarte C.Q., MacKenzie S., and Goetz F.W. Activation of rainbow trout (Oncorhynchus mykiss) mononuclear phagocytes by different pathogen associated molecular pattern (PAMP) bearing agents. Mol. Immunol. 42 (2005) 1215-1223
19. Iliev D.B., Roach J.C., Mackenzie S., Planas J.V., and Goetz F.W. Endotoxin recognition: in fish or not in fish?. FEBS Lett. 579 (2005) 6519-6528
20. Iqbal M., Philbin V.J., and Smith A.L. Expression patterns of chicken Toll-like receptor mRNA in tissues, immune cell subsets and cell lines. Vet. Immunol. Immunopathol. 104 (2005) 117-127
21. Jacinto E., and Hall M.N. Tor signalling in bugs, brain and brawn. Nat. Rev., Mol. Cell Biol. 4 (2003) 117-126
22. Janeway Jr. C.A. Approaching the asymptote? Evolution and revolution in immunology. Cold Spring Harbor Symp. Quant. Biol. 54 Pt 1 (1989) 1-13
23. Janeway Jr. C.A., and Medzhitov R. Innate immune recognition. Annu. Rev. Immunol. 20 (2002) 197-216
24. Jault C., Pichon L., and Chluba J. Toll-like receptor gene family and TIR-domain adapters in Danio rerio. Mol. Immunol. 40 (2004) 759-771
25. Kawai T., and Akira S. Pathogen recognition with Toll-like receptors. Curr. Opin. Immunol. 17 (2005) 338-344
26. Liu K.J., and Harland R.M. Cloning and characterization of Xenopus Id4 reveals differing roles for Id genes. Dev. Biol. 264 (2003) 339-351
27. MacKenzie S., Planas J.V., and Goetz F.W. LPS-stimulated expression of a tumor necrosis factor-alpha mRNA in primary trout monocytes and in vitro differentiated macrophages. Dev. Comp. Immunol. 27 (2003) 393-400
28. MacKenzie S., Iliev D., Liarte C., Koskinen H., Planas J.V., Goetz F.W., Molsa H., Krasnov A., and Tort L. Transcriptional analysis of LPS-stimulated activation of trout (Oncorhynchus mykiss) monocyte/macrophage cells in primary culture treated with cortisol. Mol. Immunol. 43 (2006) 1340-1348
29. Marques L., Brucet M., Lloberas J., and Celada A. STAT1 regulates lipopolysaccharide-and TNF-alpha-dependent expression of transporter associated with antigen processing 1 and low molecular mass polypeptide 2 genes in macrophages by distinct mechanisms. J. Immunol. 173 (2004) 1103-1110
30. Moldes M., Lasnier F., Gauthereau X., Klein C., Pairault J., Feve B., and Chambaut-Guerin A.M. Tumor necrosis factor-alpha-induced adipose-related protein (TIARP), a cell-surface protein that is highly induced by tumor necrosis factor-alpha and adipose conversion. J. Biol. Chem. 276 (2001) 33938-33946
31. Niiro H., Otsuka T., Ogami E., Yamaoka K., Nagano S., Akahoshi M., Nakashima H., Arinobu Y., Izuhara K., and Niho Y. MAP kinase pathways as a route for regulatory mechanisms of IL-10 and IL-4 which inhibit COX-2 expression in human monocytes. Biochem. Biophys. Res. Commun. 250 (1998) 200-205
32. Nonaka M., Namikawa C., Kato Y., Sasaki M., Salter-Cid L., and Flajnik M.F. Major histocompatibility complex gene mapping in the amphibian Xenopus implies a primordial organization. Proc. Natl. Acad. Sci. U. S. A. 94 (1997) 5789-5791
33. Norton J.D., Deed R.W., Craggs G., and Sablitzky F. Id helix-loop-helix proteins in cell growth and differentiation. Trends Cell Biol. 8 (1998) 58-65
34. Oshiumi H., Tsujita T., Shida K., Matsumoto M., Ikeo K., and Seya T. Prediction of the prototype of the human Toll-like receptor gene family from the pufferfish, Fugu rubripes, genome. Immunogenetics 54 (2003) 791-800
35. Ozinsky A., Underhill D.M., Fontenot J.D., Hajjar A.M., Smith K.D., Wilson C.B., Schroeder L., and Aderem A. The repertoire for pattern recognition of pathogens by the innate immune system is defined by cooperation between toll-like receptors. Proc. Natl. Acad. Sci. U. S. A. 97 (2000) 13766-13771
36. Pfaffl M.W. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 29 (2001) e45
37. Phelan P.E., Mellon M.T., and Kim C.H. Functional characterization of full-length TLR3, IRAK-4, and TRAF6 in zebrafish (Danio rerio). Mol. Immunol. 42 (2005) 1057-1071
38. Philbin V.J., Iqbal M., Boyd Y., Goodchild M.J., Beal R.K., Bumstead N., Young J., and Smith A.L. Identification and characterization of a functional, alternatively spliced Toll-like receptor 7 (TLR7) and genomic disruption of TLR8 in chickens. Immunology 114 (2005) 507-521
39. Purcell M.K., Smith K.D., Hood L., Winton J.R., and Roach J.C. Conservation of toll-like receptor signaling pathways in Teleost Fish. Comp. Biochem. Physiol. - Part D, Genom. Proteom. 1 (2006) 77-88
40. Roach J.C., Glusman G., Rowen L., Kaur A., Purcell M.K., Smith K.D., Hood L.E., and Aderem A. The evolution of vertebrate Toll-like receptors. Proc. Natl. Acad. Sci. U. S. A. 102 (2005) 9577-9582
41. Shimomura T., Denda K., Kitamura A., Kawaguchi T., Kito M., Kondo J., Kagaya S., Qin L., Takata H., Miyazawa K., and Kitamura N. Hepatocyte growth factor activator inhibitor, a novel Kunitz-type serine protease inhibitor. J. Biol. Chem. 272 (1997) 6370-6376
42. Stros M., Nishikawa S., and Dixon G.H. cDNA sequence and structure of a gene encoding trout testis high-mobility-group-1 protein. Eur. J. Biochem. 225 (1994) 581-591
43. Takami K., Zaleska-Rutczynska Z., Figueroa F., and Klein J. Linkage of LMP, TAP, and RING3 with Mhc class I rather than class II genes in the zebrafish. J. Immunol. 159 (1997) 6052-6060
44. Takeuchi O., Kawai T., Muhlradt P.F., Morr M., Radolf J.D., Zychlinsky A., Takeda K., and Akira S. Discrimination of bacterial lipoproteins by Toll-like receptor 6. Int. Immunol. 13 (2001) 933-940
45. Tsujita T., Tsukada H., Nakao M., Oshiumi H., Matsumoto M., and Seya T. Sensing bacterial flagellin by membrane and soluble orthologs of Toll-like receptor 5 in rainbow trout (Onchorhynchus mykiss). J. Biol. Chem. 279 (2004) 48588-48597
46. Werts C., Girardin S.E., and Philpott D.J. TIR, CARD and PYRIN: three domains for an antimicrobial triad. Cell Death Differ. 13 (2006) 798-815
47. Yeung Y.G., Soldera S., and Stanley E.R. A novel macrophage actin-associated protein (MAYP) is tyrosine-phosphorylated following colony stimulating factor-1 stimulation. J. Biol. Chem. 273 (1998) 30638-30642
48. Zheng J., Hu B., and Wu D. Sequence of a cDNA encoding turtle high mobility group 1 protein. Genetika 41 (2005) 925-930