-
1
-
-
0029966913
-
Stable nuclear transformation of the diatom Phaeodactylum tricornutum
-
Apt KE, Kroth-Pancic PG, Grossman AR. 1996. Stable nuclear transformation of the diatom Phaeodactylum tricornutum. Mol Gen Genet. 25:572-579.
-
(1996)
Mol Gen Genet
, vol.25
, pp. 572-579
-
-
Apt, K.E.1
Kroth-Pancic, P.G.2
Grossman, A.R.3
-
2
-
-
0036860534
-
In vivo characterization of diatom multipartite plastid targeting signals
-
Apt KE, Zaslavkaia L, Lippmeier JC, Lang M, Kilian O, Wetherbee R, Grossman AR, Kroth PG. 2002. In vivo characterization of diatom multipartite plastid targeting signals. J Cell Sci. 115:4061-4069.
-
(2002)
J Cell Sci
, vol.115
, pp. 4061-4069
-
-
Apt, K.E.1
Zaslavkaia, L.2
Lippmeier, J.C.3
Lang, M.4
Kilian, O.5
Wetherbee, R.6
Grossman, A.R.7
Kroth, P.G.8
-
3
-
-
0030667683
-
Origin and evolution of the slime molds (Mycetozoa)
-
Baldauf SL, Doolittle WF. 1997. Origin and evolution of the slime molds (Mycetozoa). Proc Natl Acad Sci USA. 94:12007-12012.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 12007-12012
-
-
Baldauf, S.L.1
Doolittle, W.F.2
-
4
-
-
4944261476
-
Evolutionary origin of a pre-protein translocase in the periplastid membrane of complex plastids: A hypothesis
-
Bodyl A. 2004. Evolutionary origin of a pre-protein translocase in the periplastid membrane of complex plastids: a hypothesis. Plant Biol. 6:513-518.
-
(2004)
Plant Biol
, vol.6
, pp. 513-518
-
-
Bodyl, A.1
-
5
-
-
0033984609
-
Weighted neighbor joining: A likelihood-based approach to distance-based phylogeny reconstruction
-
Bruno WJ, Socci ND, Halpern AL. 2000. Weighted neighbor joining: a likelihood-based approach to distance-based phylogeny reconstruction. Mol Biol Evol. 17:189-197.
-
(2000)
Mol Biol Evol
, vol.17
, pp. 189-197
-
-
Bruno, W.J.1
Socci, N.D.2
Halpern, A.L.3
-
6
-
-
0037471677
-
Genomic reduction and evolution of novel genetic membranes and protein-targeting machinery in eukaryote-eukaryote chimaeras (meta-algae)
-
Cavalier-Smith T. 2003. Genomic reduction and evolution of novel genetic membranes and protein-targeting machinery in eukaryote-eukaryote chimaeras (meta-algae). Philos Trans R Soc Lond B Biol Sci. 358:109-133.
-
(2003)
Philos Trans R Soc Lond B Biol Sci
, vol.358
, pp. 109-133
-
-
Cavalier-Smith, T.1
-
7
-
-
17844399012
-
Protein import pathways in 'complex' chloroplasts derived from secondary endosymbiosis involving a red algal ancestor
-
Chaal BK, Green BR. 2005. Protein import pathways in 'complex' chloroplasts derived from secondary endosymbiosis involving a red algal ancestor. Plant Mol Biol. 57:333-342.
-
(2005)
Plant Mol Biol
, vol.57
, pp. 333-342
-
-
Chaal, B.K.1
Green, B.R.2
-
8
-
-
0033789676
-
Evidence for nucleomorph to host nucleus gene transfer: Light-harvesting complex proteins from cryptomonads and chlorarachniophytes
-
Deane JA, Fraunholz M, Su V, Maier U-G, Martin W, Durnford DG, McFadden GI. 2000. Evidence for nucleomorph to host nucleus gene transfer: light-harvesting complex proteins from cryptomonads and chlorarachniophytes. Protist. 151:239-252.
-
(2000)
Protist
, vol.151
, pp. 239-252
-
-
Deane, J.A.1
Fraunholz, M.2
Su, V.3
Maier, U.-G.4
Martin, W.5
Durnford, D.G.6
McFadden, G.I.7
-
9
-
-
33745145858
-
The nature of the periplastid pathway of amylose synthesis in the cryptophyte Guillardia theta
-
12 co-authors
-
Deschamps P, Haferkamp I, Dauvillee D, et al. (12 co-authors). 2006. The nature of the periplastid pathway of amylose synthesis in the cryptophyte Guillardia theta. Eukaryotic Cell. 5:954-963.
-
(2006)
Eukaryotic Cell
, vol.5
, pp. 954-963
-
-
Deschamps, P.1
Haferkamp, I.2
Dauvillee, D.3
-
10
-
-
0035953753
-
The highly reduced genome of an enslaved algal nucleus
-
Douglas E, Zauner S, Fraunholz M, Beaton M, Penny S, Deng LT, Wu X, Reith M, Cavalier-Smith T, Maier UG. 2001. The highly reduced genome of an enslaved algal nucleus. Nature. 410:1091-1096.
-
(2001)
Nature
, vol.410
, pp. 1091-1096
-
-
Douglas, E.1
Zauner, S.2
Fraunholz, M.3
Beaton, M.4
Penny, S.5
Deng, L.T.6
Wu, X.7
Reith, M.8
Cavalier-Smith, T.9
Maier, U.G.10
-
11
-
-
0035103466
-
Nuclear-encoded, plastid-targeted genes suggest a single common origin for apicomplexan and dinoflagellate plastids
-
Fast NM, Kissinger JC, Roos DS, Keeling PJ. 2001. Nuclear-encoded, plastid-targeted genes suggest a single common origin for apicomplexan and dinoflagellate plastids. Mol Biol Evol. 18:418-426.
-
(2001)
Mol Biol Evol
, vol.18
, pp. 418-426
-
-
Fast, N.M.1
Kissinger, J.C.2
Roos, D.S.3
Keeling, P.J.4
-
12
-
-
0035895207
-
Function-structure analysis of proteins using covarion-based evolutionary approaches: Elongation factors
-
Gaucher EA, Miyamoto MM, Benner SA. 2001. Function-structure analysis of proteins using covarion-based evolutionary approaches: elongation factors. Proc Natl Acad Sci USA. 98:548-552.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 548-552
-
-
Gaucher, E.A.1
Miyamoto, M.M.2
Benner, S.A.3
-
13
-
-
0018331207
-
The route of entry of cytoplasmically synthesized proteins into chloroplasts of algae possessing chloroplast ER
-
Gibbs SP. 1979. The route of entry of cytoplasmically synthesized proteins into chloroplasts of algae possessing chloroplast ER. J Cell Sci. 35:253-266.
-
(1979)
J Cell Sci
, vol.35
, pp. 253-266
-
-
Gibbs, S.P.1
-
14
-
-
0019485803
-
The chloroplasts of some algal groups may have evolved from endosymbiotic eukaryotic algae
-
Gibbs SP. 1981. The chloroplasts of some algal groups may have evolved from endosymbiotic eukaryotic algae. Ann NY Acad Sci. 361:193-208.
-
(1981)
Ann NY Acad Sci
, vol.361
, pp. 193-208
-
-
Gibbs, S.P.1
-
15
-
-
33749447132
-
EFL GTPase in cryptomonads and the distribution of EFL and EF-1α in chromalveolates
-
Forthcoming
-
Gile GH, Patron NJ, Keeling PJ. Forthcoming 2006. EFL GTPase in cryptomonads and the distribution of EFL and EF-1α in chromalveolates. Protist.
-
(2006)
Protist
-
-
Gile, G.H.1
Patron, N.J.2
Keeling, P.J.3
-
16
-
-
33744929620
-
Protein targeting into the complex plastid of cryptophytes
-
Gould SB, Sommer MS, Hadfi K, Zauner S, Maier UG. 2006. Protein targeting into the complex plastid of cryptophytes. J Mol Evol. 62:674-681.
-
(2006)
J Mol Evol
, vol.62
, pp. 674-681
-
-
Gould, S.B.1
Sommer, M.S.2
Hadfi, K.3
Zauner, S.4
Maier, U.G.5
-
17
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S, Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol. 52:696-704.
-
(2003)
Syst Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
18
-
-
13244270095
-
On the monophyly of chromalveolates using a six-protein phylogeny of eukaryotes
-
Harper JT, Waanders E, Keeling PJ. 2005. On the monophyly of chromalveolates using a six-protein phylogeny of eukaryotes. Int J Syst Evol Microbiol. 55:487-496.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 487-496
-
-
Harper, J.T.1
Waanders, E.2
Keeling, P.J.3
-
19
-
-
0029096504
-
Phylogenetic place of mitochondrion- lacking protozoan, Giardia lamblia, inferred from amino acid sequences of elongation factor 2
-
Hashimoto T, Nakamura Y, Kamaishi T, Nakamura F, Adachi J, Okamoto K, Hasegawa M. 1995. Phylogenetic place of mitochondrion- lacking protozoan, Giardia lamblia, inferred from amino acid sequences of elongation factor 2. Mol Biol Evol. 12:782-793.
-
(1995)
Mol Biol Evol
, vol.12
, pp. 782-793
-
-
Hashimoto, T.1
Nakamura, Y.2
Kamaishi, T.3
Nakamura, F.4
Adachi, J.5
Okamoto, K.6
Hasegawa, M.7
-
20
-
-
33750933452
-
Zero, one, two, three, and perhaps four. Endosymbiosis and the gain and loss of plastids
-
Hjorth E, Hadfi K, Gould SB, Kawach O, Sommer MS, Zauner S, Maier UG. 2005. Zero, one, two, three, and perhaps four. Endosymbiosis and the gain and loss of plastids. Endocytobiosis Cell Res. 15:459-468.
-
(2005)
Endocytobiosis Cell Res
, vol.15
, pp. 459-468
-
-
Hjorth, E.1
Hadfi, K.2
Gould, S.B.3
Kawach, O.4
Sommer, M.S.5
Zauner, S.6
Maier, U.G.7
-
21
-
-
0026691182
-
The rapid generation of mutation data matrices from protein sequences
-
Jones DT, Taylor WR, Thornton JM. 1992. The rapid generation of mutation data matrices from protein sequences. Comput Appl Biosci. 8:275-282.
-
(1992)
Comput Appl Biosci
, vol.8
, pp. 275-282
-
-
Jones, D.T.1
Taylor, W.R.2
Thornton, J.M.3
-
22
-
-
7444263971
-
A class of eukaryotic GTPase with a punctate distribution suggesting multiple functional replacements of translation elongation factor 1α
-
Keeling PJ, Inagaki Y. 2004. A class of eukaryotic GTPase with a punctate distribution suggesting multiple functional replacements of translation elongation factor 1α. Proc Natl Acad Sci USA. 101:15380-15385.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 15380-15385
-
-
Keeling, P.J.1
Inagaki, Y.2
-
23
-
-
12844260363
-
Identification and characterization of a new conserved motif within the pre-sequence of proteins targeted into complex diatom plastids
-
Kilian O, Kroth PG. 2005. Identification and characterization of a new conserved motif within the pre-sequence of proteins targeted into complex diatom plastids. Plant J. 4:175-183.
-
(2005)
Plant J
, vol.4
, pp. 175-183
-
-
Kilian, O.1
Kroth, P.G.2
-
24
-
-
29444448769
-
The peculiar distribution of class I and class II aldolases in diatoms and in red algae
-
Kroth PG, Schroers Y, Kilian O. 2005. The peculiar distribution of class I and class II aldolases in diatoms and in red algae. Curr Genet. 48:389-400.
-
(2005)
Curr Genet
, vol.48
, pp. 389-400
-
-
Kroth, P.G.1
Schroers, Y.2
Kilian, O.3
-
25
-
-
27744526687
-
Origin, evolution and genetic effects of nuclear insertions of organelle DNA
-
Leister D. 2005. Origin, evolution and genetic effects of nuclear insertions of organelle DNA. Trends Genet. 21:655-663.
-
(2005)
Trends Genet
, vol.21
, pp. 655-663
-
-
Leister, D.1
-
26
-
-
14744294785
-
Iron-sulfur-protein biogenesis in eukaryotes
-
Lill R, Mühlenhoff U. 2005. Iron-sulfur-protein biogenesis in eukaryotes. Trends Biochem Sci. 30:133-141.
-
(2005)
Trends Biochem Sci
, vol.30
, pp. 133-141
-
-
Lill, R.1
Mühlenhoff, U.2
-
27
-
-
3142738371
-
Evolution: Red algal genome affirms a common origin of all plastids
-
McFadden GI, van Dooren GG. 2004. Evolution: red algal genome affirms a common origin of all plastids. Curr Biol. 14:514-516.
-
(2004)
Curr Biol
, vol.14
, pp. 514-516
-
-
McFadden, G.I.1
Van Dooren, G.G.2
-
28
-
-
0000649022
-
Cell and nucleomorph division in the alga Cryptomonas
-
McKerracher L, Gibbs S. 1982. Cell and nucleomorph division in the alga Cryptomonas. Can J Bot. 60:2440-2452.
-
(1982)
Can J Bot
, vol.60
, pp. 2440-2452
-
-
McKerracher, L.1
Gibbs, S.2
-
29
-
-
6344265521
-
Gene replacement of fructose-1,6-bisphosphate aldolase (FBA) supports a single photosynthetic ancestor of chromalveolates
-
Patron NJ, Rogers MB, Keeling PJ. 2004. Gene replacement of fructose-1,6-bisphosphate aldolase (FBA) supports a single photosynthetic ancestor of chromalveolates. Eukaryot Cell. 3:1169-1175.
-
(2004)
Eukaryot Cell
, vol.3
, pp. 1169-1175
-
-
Patron, N.J.1
Rogers, M.B.2
Keeling, P.J.3
-
31
-
-
33645100385
-
A tertiary plastid uses genes from two endosymbionts
-
Patron NJ, Waller RF, Keeling PJ. 2006. A tertiary plastid uses genes from two endosymbionts. J Mol Biol. 357: 1373-1382.
-
(2006)
J Mol Biol
, vol.357
, pp. 1373-1382
-
-
Patron, N.J.1
Waller, R.F.2
Keeling, P.J.3
-
32
-
-
0033039592
-
An evaluation of elongation factor 1 alpha as a phylogenetic marker for eukaryotes
-
Roger AJ, Sandbloom O, Doolittle WF, Philippe H. 1999. An evaluation of elongation factor 1 alpha as a phylogenetic marker for eukaryotes. Mol Biol Evol. 16:218-233.
-
(1999)
Mol Biol Evol
, vol.16
, pp. 218-233
-
-
Roger, A.J.1
Sandbloom, O.2
Doolittle, W.F.3
Philippe, H.4
-
33
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F, Huelsenbeck JP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 19:1572-1574.
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
34
-
-
0036205377
-
TREE-PUZZLE: Maximum likelihood phylogenetic analysis using quartets and parallel computing
-
Schmidt HA, Strimmer K, Vingron M, von Haeseler A. 2002. TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics. 18: 502-504.
-
(2002)
Bioinformatics
, vol.18
, pp. 502-504
-
-
Schmidt, H.A.1
Strimmer, K.2
Vingron, M.3
Von Haeseler, A.4
-
35
-
-
0036623258
-
An approximately unbiased test of phylogenetic tree selection
-
Shimodaira H. 2002. An approximately unbiased test of phylogenetic tree selection. Syst Biol. 51:492-508.
-
(2002)
Syst Biol
, vol.51
, pp. 492-508
-
-
Shimodaira, H.1
-
36
-
-
0036139287
-
CONSEL: For assessing the confidence of phylogenetic tree selection
-
Shimodaira H, Hasegawa M. 2001. CONSEL: for assessing the confidence of phylogenetic tree selection. Bioinformatics. 17:1246-1247.
-
(2001)
Bioinformatics
, vol.17
, pp. 1246-1247
-
-
Shimodaira, H.1
Hasegawa, M.2
-
37
-
-
33644669761
-
Homolog protein import machineries in chloroplasts and cyanelles
-
Steiner JM, Yusa F, Pompe JA, Loeffelhardt W. 2005. Homolog protein import machineries in chloroplasts and cyanelles. Plant J. 44:646-652.
-
(2005)
Plant J
, vol.44
, pp. 646-652
-
-
Steiner, J.M.1
Yusa, F.2
Pompe, J.A.3
Loeffelhardt, W.4
-
38
-
-
0033745897
-
Symbiotic origin of a novel actin gene in the cryptophyte Pyrenomonas helgolandii
-
Stibitz TB, Keeling PJ, Bhattacharya D. 2000. Symbiotic origin of a novel actin gene in the cryptophyte Pyrenomonas helgolandii. Mol Biol Evol. 17:1731-1738.
-
(2000)
Mol Biol Evol
, vol.17
, pp. 1731-1738
-
-
Stibitz, T.B.1
Keeling, P.J.2
Bhattacharya, D.3
-
40
-
-
0034725663
-
Transport of proteins into cryptomonads complex plastids
-
Wastl J, Maier UG. 2000. Transport of proteins into cryptomonads complex plastids. J Biol Chem. 275:23194-23198.
-
(2000)
J Biol Chem
, vol.275
, pp. 23194-23198
-
-
Wastl, J.1
Maier, U.G.2
-
41
-
-
0035031966
-
A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach
-
Whelan S, Goldman N. 2001. A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach. Mol Biol Evol. 18:691-699.
-
(2001)
Mol Biol Evol
, vol.18
, pp. 691-699
-
-
Whelan, S.1
Goldman, N.2
-
42
-
-
0033855410
-
Additional selectable marker and reporter genes for use in transforming the diatom Phaeodactylum tricornutum
-
Zaslavskaia LA, Lippmeier JC, Kroth PG, Grossman AR, Apt KE. 2000. Additional selectable marker and reporter genes for use in transforming the diatom Phaeodactylum tricornutum. J Phycol. 36:379-386.
-
(2000)
J Phycol
, vol.36
, pp. 379-386
-
-
Zaslavskaia, L.A.1
Lippmeier, J.C.2
Kroth, P.G.3
Grossman, A.R.4
Apt, K.E.5
|