-
1
-
-
0034602344
-
A kingdom-level phylogeny of eukaryotes based on combined protein data
-
Baldauf S.L., Roger A.J., Wenk-Siefert I., and Doolittle W.F. A kingdom-level phylogeny of eukaryotes based on combined protein data. Science 290 (2000) 972-977
-
(2000)
Science
, vol.290
, pp. 972-977
-
-
Baldauf, S.L.1
Roger, A.J.2
Wenk-Siefert, I.3
Doolittle, W.F.4
-
2
-
-
33645027271
-
Fungal laccases-occurrence and properties
-
Baldrian P. Fungal laccases-occurrence and properties. FEMS Microbiology Reviews 30 (2006) 215-242
-
(2006)
FEMS Microbiology Reviews
, vol.30
, pp. 215-242
-
-
Baldrian, P.1
-
3
-
-
0842264837
-
Comparison of extracellular phospholipase activities in clinical and environmental Aspergillus fumigatus isolates
-
Birch M., Denning D.W., and Robson G.D. Comparison of extracellular phospholipase activities in clinical and environmental Aspergillus fumigatus isolates. Medical Mycology 42 (2004) 81-86
-
(2004)
Medical Mycology
, vol.42
, pp. 81-86
-
-
Birch, M.1
Denning, D.W.2
Robson, G.D.3
-
4
-
-
0030040578
-
Evidence of multiple phospholipase activities of Aspergillus fumigatus
-
Birch M., Robson G., Law D., and Denning D.W. Evidence of multiple phospholipase activities of Aspergillus fumigatus. Infection and Immunity 64 (1996) 751-755
-
(1996)
Infection and Immunity
, vol.64
, pp. 751-755
-
-
Birch, M.1
Robson, G.2
Law, D.3
Denning, D.W.4
-
6
-
-
24044433279
-
ACT: the Artemis Comparison Tool
-
Carver T.J., Rutherford K.M., Berriman M., Rajandream M.-A., Barrell B.G., and Parkhill J. ACT: the Artemis Comparison Tool. Bioinformatics 21 (2005) 3422-3423
-
(2005)
Bioinformatics
, vol.21
, pp. 3422-3423
-
-
Carver, T.J.1
Rutherford, K.M.2
Berriman, M.3
Rajandream, M.-A.4
Barrell, B.G.5
Parkhill, J.6
-
7
-
-
0034655753
-
Purification and characterization of secretory phospholipase B, lysophospholipase and lysophospholipase/transacylase from a virulent strain of the pathogenic fungus Cryptococcus neoformans
-
Chen S.C., Wright L.C., Golding J.C., and Sorrell T.C. Purification and characterization of secretory phospholipase B, lysophospholipase and lysophospholipase/transacylase from a virulent strain of the pathogenic fungus Cryptococcus neoformans. Biochemical Journal 347 (2000) 431-439
-
(2000)
Biochemical Journal
, vol.347
, pp. 431-439
-
-
Chen, S.C.1
Wright, L.C.2
Golding, J.C.3
Sorrell, T.C.4
-
8
-
-
0032420333
-
Jpred: a consensus secondary structure prediction server
-
Cuff J.A., Clamp M.E., Siddiqui A.S., Finlay M., and Barton G.J. Jpred: a consensus secondary structure prediction server. Bioinformatics 14 (1998) 892-893
-
(1998)
Bioinformatics
, vol.14
, pp. 892-893
-
-
Cuff, J.A.1
Clamp, M.E.2
Siddiqui, A.S.3
Finlay, M.4
Barton, G.J.5
-
9
-
-
0003437299
-
-
Distributed by the author, Department of Genome Sciences, University of Washington, Seattle
-
Felsenstein J. PHYLIP (Phylogeny Inference Package). version 3.6a3. Distributed by the author (2002), Department of Genome Sciences, University of Washington, Seattle
-
(2002)
PHYLIP (Phylogeny Inference Package). version 3.6a3
-
-
Felsenstein, J.1
-
10
-
-
4544329456
-
Transcriptome analysis of Pseudomonas aeruginosa after interaction with human airway epithelial cells
-
Frisk A., Schurr J.R., Wang G., Bertucci D.C., Marrero L., Hwang S.H., Hassett D.J., and Schurr M.J. Transcriptome analysis of Pseudomonas aeruginosa after interaction with human airway epithelial cells. Infection and Immunity 72 (2004) 5433-5438
-
(2004)
Infection and Immunity
, vol.72
, pp. 5433-5438
-
-
Frisk, A.1
Schurr, J.R.2
Wang, G.3
Bertucci, D.C.4
Marrero, L.5
Hwang, S.H.6
Hassett, D.J.7
Schurr, M.J.8
-
11
-
-
0035576329
-
Conserved core structure and active site residues in alkaline phosphatase superfamily enzymes
-
Galperin M.Y., and Jedrzejas M.J. Conserved core structure and active site residues in alkaline phosphatase superfamily enzymes. Proteins 45 (2001) 318-324
-
(2001)
Proteins
, vol.45
, pp. 318-324
-
-
Galperin, M.Y.1
Jedrzejas, M.J.2
-
12
-
-
0031741483
-
Evolutionary relationships in Aspergillus section Fumigati inferred from partial β-tubulin and hydrophobin DNA sequences
-
Geiser D.M., Frisvad J.C., and Taylor J.W. Evolutionary relationships in Aspergillus section Fumigati inferred from partial β-tubulin and hydrophobin DNA sequences. Mycologia 90 (1998) 831-845
-
(1998)
Mycologia
, vol.90
, pp. 831-845
-
-
Geiser, D.M.1
Frisvad, J.C.2
Taylor, J.W.3
-
14
-
-
0038386050
-
3D-Jury: a simple approach to improve protein structure predictions
-
Ginalski K., Elofsson A., Fischer D., and Rychlewski L. 3D-Jury: a simple approach to improve protein structure predictions. Bioinformatics 19 (2003) 1015-1018
-
(2003)
Bioinformatics
, vol.19
, pp. 1015-1018
-
-
Ginalski, K.1
Elofsson, A.2
Fischer, D.3
Rychlewski, L.4
-
15
-
-
0035798406
-
Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure
-
Gough J., Karplus K., Hughey R., and Chothia C. Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure. Journal of Molecular Biology 313 (2001) 903-919
-
(2001)
Journal of Molecular Biology
, vol.313
, pp. 903-919
-
-
Gough, J.1
Karplus, K.2
Hughey, R.3
Chothia, C.4
-
16
-
-
0002163193
-
Swiss-PdbViewer: a new fast and easy to use PDB viewer for the Macintosh
-
Guex N. Swiss-PdbViewer: a new fast and easy to use PDB viewer for the Macintosh. Experientia 52 (1996) A26
-
(1996)
Experientia
, vol.52
-
-
Guex, N.1
-
17
-
-
0031473847
-
SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling
-
Guex N., and Peitsch M.C. SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis 18 (1997) 2714-2723
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
18
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Higgins D., Thompson J., Gibson T., Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22 (1994) 4673-4680
-
(1994)
Nucleic Acids Research
, vol.22
, pp. 4673-4680
-
-
Higgins, D.1
Thompson, J.2
Gibson, T.3
Thompson, J.D.4
Higgins, D.G.5
Gibson, T.J.6
-
19
-
-
0035861456
-
Bayesian inference of phylogeny and its impact on evolutionary biology
-
Huelsenbeck J.P., Ronquist F., Nielsen R., and Bollback J.P. Bayesian inference of phylogeny and its impact on evolutionary biology. Science 294 (2001) 2310-2314
-
(2001)
Science
, vol.294
, pp. 2310-2314
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
Nielsen, R.3
Bollback, J.P.4
-
20
-
-
0036890388
-
Natural selection promotes the conservation of linkage of co-expressed genes
-
Hurst L.D., Williams E.J., and Pal C. Natural selection promotes the conservation of linkage of co-expressed genes. Trends in Genetics 18 (2002) 604-606
-
(2002)
Trends in Genetics
, vol.18
, pp. 604-606
-
-
Hurst, L.D.1
Williams, E.J.2
Pal, C.3
-
21
-
-
0035423126
-
The pathobiology of Aspergillus fumigatus
-
Latge J.P. The pathobiology of Aspergillus fumigatus. Trends in Microbiology 9 (2001) 382-389
-
(2001)
Trends in Microbiology
, vol.9
, pp. 382-389
-
-
Latge, J.P.1
-
22
-
-
0032475850
-
Cloning and disruption of caPLB1, a phospholipase B gene involved in the pathogenicity of Candida albicans
-
Leidich S.D., Ibrahim A.S., Fu Y., Koul A., Jessup C., Vitullo J., Fonzi W., Mirbod F., Nakashima S., Nozawa Y., and Ghannoum M.A. Cloning and disruption of caPLB1, a phospholipase B gene involved in the pathogenicity of Candida albicans. Journal of Biological Chemistry 273 (1998) 26078-26086
-
(1998)
Journal of Biological Chemistry
, vol.273
, pp. 26078-26086
-
-
Leidich, S.D.1
Ibrahim, A.S.2
Fu, Y.3
Koul, A.4
Jessup, C.5
Vitullo, J.6
Fonzi, W.7
Mirbod, F.8
Nakashima, S.9
Nozawa, Y.10
Ghannoum, M.A.11
-
23
-
-
32044471897
-
Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits
-
Lutzoni F., Kauff F., Cox C.J., McLaughlin D., Celio G., Dentinger B., Padamsee M., Hibbett D., James T.Y., Baloch E., Grube M., Reeb V., Hofstetter V., Schoch C., Arnold A.E., Miadlikowska J., Spatafora J., Johnson D., Hambleton S., Crockett M., Shoemaker R., Sung G.-H., Lücking R., Lumbsch T., O'Donnell K., Binder M., Diederich P., Ertz D., Gueidan C., Hansen K., Harris R.C., Hosaka K., Lim Y.-W., Matheny B., Nishida H., Pfister D., Rogers J., Rossman A., Schmitt I., Sipman H., Stone J., Sugiyama J., Yahr R., and Vilgalys R. Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits. American Journal of Botany 91 (2004) 1446-1480
-
(2004)
American Journal of Botany
, vol.91
, pp. 1446-1480
-
-
Lutzoni, F.1
Kauff, F.2
Cox, C.J.3
McLaughlin, D.4
Celio, G.5
Dentinger, B.6
Padamsee, M.7
Hibbett, D.8
James, T.Y.9
Baloch, E.10
Grube, M.11
Reeb, V.12
Hofstetter, V.13
Schoch, C.14
Arnold, A.E.15
Miadlikowska, J.16
Spatafora, J.17
Johnson, D.18
Hambleton, S.19
Crockett, M.20
Shoemaker, R.21
Sung, G.-H.22
Lücking, R.23
Lumbsch, T.24
O'Donnell, K.25
Binder, M.26
Diederich, P.27
Ertz, D.28
Gueidan, C.29
Hansen, K.30
Harris, R.C.31
Hosaka, K.32
Lim, Y.-W.33
Matheny, B.34
Nishida, H.35
Pfister, D.36
Rogers, J.37
Rossman, A.38
Schmitt, I.39
Sipman, H.40
Stone, J.41
Sugiyama, J.42
Yahr, R.43
Vilgalys, R.44
more..
-
24
-
-
9144273788
-
CADRE: the Central Aspergillus Data REpository
-
Mabey J.E., Anderson M.J., Giles P.F., Miller C.J., Attwood T.K., Paton N.W., Bornberg-Bauer E., Robson G.D., Oliver S.G., and Denning D.W. CADRE: the Central Aspergillus Data REpository. Nucleic Acids Research 32 (2004) D401-D405
-
(2004)
Nucleic Acids Research
, vol.32
-
-
Mabey, J.E.1
Anderson, M.J.2
Giles, P.F.3
Miller, C.J.4
Attwood, T.K.5
Paton, N.W.6
Bornberg-Bauer, E.7
Robson, G.D.8
Oliver, S.G.9
Denning, D.W.10
-
25
-
-
0023430866
-
Purification and properties of a phospholipase C that has high activity toward sphingomyelin from Aspergillus saitoi
-
Matsuoka S., Kimura H., Kiuchi A., Ohkawa H., and Yagi K. Purification and properties of a phospholipase C that has high activity toward sphingomyelin from Aspergillus saitoi. Biotechnology and Applied Biochemistry 9 (1987) 401-409
-
(1987)
Biotechnology and Applied Biochemistry
, vol.9
, pp. 401-409
-
-
Matsuoka, S.1
Kimura, H.2
Kiuchi, A.3
Ohkawa, H.4
Yagi, K.5
-
26
-
-
0031851853
-
GCUA (general codon usage analysis)
-
McInerney J.O. GCUA (general codon usage analysis). Bioinformatics 14 (1998) 372-373
-
(1998)
Bioinformatics
, vol.14
, pp. 372-373
-
-
McInerney, J.O.1
-
27
-
-
0036801315
-
Secreted proteases from pathogenic fungi
-
Monod M., Capoccia S., Lechenne B., Zaugg C., Holdom M., and Jousson O. Secreted proteases from pathogenic fungi. International Journal of Medical Microbiology 292 (2002) 405-419
-
(2002)
International Journal of Medical Microbiology
, vol.292
, pp. 405-419
-
-
Monod, M.1
Capoccia, S.2
Lechenne, B.3
Zaugg, C.4
Holdom, M.5
Jousson, O.6
-
28
-
-
0000092138
-
Phylogenetic relationships in Aspergillus based on rDNA sequence analysis
-
Samson R.A., and Pitt J.I. (Eds), Harwood Academic Publishers, Amsterdam
-
Peterson S.W. Phylogenetic relationships in Aspergillus based on rDNA sequence analysis. In: Samson R.A., and Pitt J.I. (Eds). Integration of Modern Taxonomic Methods for Penicillium and Aspergillus Classification (2000), Harwood Academic Publishers, Amsterdam 323-355
-
(2000)
Integration of Modern Taxonomic Methods for Penicillium and Aspergillus Classification
, pp. 323-355
-
-
Peterson, S.W.1
-
29
-
-
22844439400
-
A preliminary analysis of the process of protein secretion and the diversity of putative secreted hydrolases encoded in Aspergillus fumigatus: insights from the genome
-
Robson G.D., Huang J., Wortman J., and Archer D.B. A preliminary analysis of the process of protein secretion and the diversity of putative secreted hydrolases encoded in Aspergillus fumigatus: insights from the genome. Medical Mycology 43 (2005) S41-S47
-
(2005)
Medical Mycology
, vol.43
-
-
Robson, G.D.1
Huang, J.2
Wortman, J.3
Archer, D.B.4
-
30
-
-
0041386108
-
MRBAYES 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F., and Huelsenbeck J.P. MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 (2003) 1572-1574
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
31
-
-
0002115029
-
Current systematics of the genus Aspergillus
-
Powell K.A., Renwick A., and Peberdy J.F. (Eds), Plenum Press, London
-
Samson R.A. Current systematics of the genus Aspergillus. In: Powell K.A., Renwick A., and Peberdy J.F. (Eds). The Genus Aspergillus: from Taxonomy and Genetics to Industrial Application (1994), Plenum Press, London 261-276
-
(1994)
The Genus Aspergillus: from Taxonomy and Genetics to Industrial Application
, pp. 261-276
-
-
Samson, R.A.1
-
32
-
-
0036205377
-
TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing
-
Schmidt H.A., Strimmer K., Vingron M., and von Haeseler A. TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics. 18 (2002) 502-504
-
(2002)
Bioinformatics.
, vol.18
, pp. 502-504
-
-
Schmidt, H.A.1
Strimmer, K.2
Vingron, M.3
von Haeseler, A.4
-
33
-
-
4644345172
-
Characterisation and expression of phospholipases B from the opportunistic fungus Aspergillus fumigatus
-
Shen D.K., Noodeh A.D., Kazemi A., Grillot R., Robson G., and Brugere J.F. Characterisation and expression of phospholipases B from the opportunistic fungus Aspergillus fumigatus. FEMS Microbiology Letters 239 (2004) 87-93
-
(2004)
FEMS Microbiology Letters
, vol.239
, pp. 87-93
-
-
Shen, D.K.1
Noodeh, A.D.2
Kazemi, A.3
Grillot, R.4
Robson, G.5
Brugere, J.F.6
-
34
-
-
0030950716
-
Bacterial phospholipases and their role in virulence
-
Songer J.G. Bacterial phospholipases and their role in virulence. Trends in Microbiology 5 (1997) 156-161
-
(1997)
Trends in Microbiology
, vol.5
, pp. 156-161
-
-
Songer, J.G.1
-
35
-
-
18744401043
-
A novel class of microbial phosphocholine-specific phospholipases C
-
Stonehouse M.J., Cota-Gomez A., Parker S.K., Martin W.E., Hankin J.A., Murphy R.C., Chen W., Lim K.B., Hackett M., Vasil A.I., and Vasil M.L. A novel class of microbial phosphocholine-specific phospholipases C. Molecular Microbiology 46 (2002) 661-676
-
(2002)
Molecular Microbiology
, vol.46
, pp. 661-676
-
-
Stonehouse, M.J.1
Cota-Gomez, A.2
Parker, S.K.3
Martin, W.E.4
Hankin, J.A.5
Murphy, R.C.6
Chen, W.7
Lim, K.B.8
Hackett, M.9
Vasil, A.I.10
Vasil, M.L.11
-
36
-
-
0027231710
-
Bacterial phospholipases C
-
Titball R.W. Bacterial phospholipases C. Microbiological Reviews 57 (1993) 347-366
-
(1993)
Microbiological Reviews
, vol.57
, pp. 347-366
-
-
Titball, R.W.1
-
38
-
-
30044445192
-
Physiology and biotechnology of Aspergillus
-
Ward O.P., Qin W.M., Dhanjoon J., Ye J., and Singh A. Physiology and biotechnology of Aspergillus. Advances in Applied Microbiology 58 (2006) 1-75
-
(2006)
Advances in Applied Microbiology
, vol.58
, pp. 1-75
-
-
Ward, O.P.1
Qin, W.M.2
Dhanjoon, J.3
Ye, J.4
Singh, A.5
|