-
1
-
-
1842591134
-
Trichoderma species. Opportunistic, avirulent plant symbionts
-
(January)
-
Harman G, Howell CR, Viterbo A, Chet I, Lorito M: Trichoderma species. Opportunistic, avirulent plant symbionts. Nat Rev 2004, 2(January):43-56.
-
(2004)
Nat Rev
, vol.2
, pp. 43-56
-
-
Harman, G.1
Howell, C.R.2
Viterbo, A.3
Chet, I.4
Lorito, M.5
-
2
-
-
0037226578
-
Mechanisms employed by Trichoderma species in the biological control of plant diseases: The history and evolution of current concepts
-
Howell CR: Mechanisms employed by Trichoderma species in the biological control of plant diseases: the history and evolution of current concepts. Plant Dis 2003, 87:4-10.
-
(2003)
Plant Dis
, vol.87
, pp. 4-10
-
-
Howell, C.R.1
-
3
-
-
15744392154
-
Biocontrol mechanisms of Trichoderma strains
-
Benítez T, Rincón AM, Limón MC, Codón AC: Biocontrol mechanisms of Trichoderma strains. Int Microbiol 2004, 7(4):249-260.
-
(2004)
Int Microbiol
, vol.7
, Issue.4
, pp. 249-260
-
-
Benítez, T.1
Rincón, A.M.2
Limón, M.C.3
Codón, A.C.4
-
4
-
-
0036429950
-
Significance of lytic enzymes from Trichoderma spp. in the biocontrol of fungal plant pathogens
-
Viterbo A, Ramot O, Chemin L, Chet I: Significance of lytic enzymes from Trichoderma spp. in the biocontrol of fungal plant pathogens. Antonie Van Leeuwenhoek 2002, 81(1-4):549-556.
-
(2002)
Antonie Van Leeuwenhoek
, vol.81
, Issue.1-4
, pp. 549-556
-
-
Viterbo, A.1
Ramot, O.2
Chemin, L.3
Chet, I.4
-
6
-
-
84873058114
-
-
TrichoEST - The European Trichoderma's Sequencing Project
-
TrichoEST - The European Trichoderma's sequencing project [http://www.trichoderma.org]
-
-
-
-
7
-
-
32144453762
-
Genomics of Trichoderma
-
In Edited by: Khachatourians GG. Amsterdam: Elsevier Science
-
Rey M, Llobell A, Monte E, Scala F, Lorito M: Genomics of Trichoderma. In Fungal Genomics Volume 4. Edited by: Khachatourians GG. Amsterdam: Elsevier Science; 2004.
-
(2004)
Fungal Genomics
, vol.4
-
-
Rey, M.1
Llobell, A.2
Monte, E.3
Scala, F.4
Lorito, M.5
-
8
-
-
0037373694
-
Analysis of expressed sequence tags from Gibberella zeae (anamorph Fusarium graminearum)
-
Trail F, Xu JR, San Miguel P, Halgren RG, Kistler HC: Analysis of expressed sequence tags from Gibberella zeae (anamorph Fusarium graminearum). Fungal Genet Biol 2003, 38(2):187-197.
-
(2003)
Fungal Genet Biol
, vol.38
, Issue.2
, pp. 187-197
-
-
Trail, F.1
Xu, J.R.2
San Miguel, P.3
Halgren, R.G.4
Kistler, H.C.5
-
9
-
-
8844227515
-
Gene discovery and gene expression in the rice blast fungus, Magnaporthe grisea: Analysis of expressed sequence tags
-
Ebbole DJ, Jin Y, Thon M, Pan H, Bhattarai E, Thomas T, Dean R. Gene discovery and gene expression in the rice blast fungus, Magnaporthe grisea: analysis of expressed sequence tags. Mol Plant Microbe Interact 2004, 17(12):1337-1347.
-
(2004)
Mol Plant Microbe Interact
, vol.17
, Issue.12
, pp. 1337-1347
-
-
Ebbole, D.J.1
Jin, Y.2
Thon, M.3
Pan, H.4
Bhattarai, E.5
Thomas, T.6
Dean, R.7
-
10
-
-
16344372268
-
Analysis of expressed sequence tags from the wheat leaf blotch pathogen Mycosphaerella graminicola (anamorph Septoria tritici)
-
Keon J, Antoniw J, Rudd J, Skinner W, Hargreaves J, Hammond-Kosack K. Analysis of expressed sequence tags from the wheat leaf blotch pathogen Mycosphaerella graminicola (anamorph Septoria tritici). Fungal Genet Biol 2005, 42(5):376-389.
-
(2005)
Fungal Genet Biol
, vol.42
, Issue.5
, pp. 376-389
-
-
Keon, J.1
Antoniw, J.2
Rudd, J.3
Skinner, W.4
Hargreaves, J.5
Hammond-Kosack, K.6
-
11
-
-
20444428334
-
Gene identification in the oomycete pathogen Phytophthora parasitica during in vitro vegetative growth through expressed sequence tags
-
Panabieres F, Amselem J, Galiana E, Le Berre JY: Gene identification in the oomycete pathogen Phytophthora parasitica during in vitro vegetative growth through expressed sequence tags. Fungal Genet Biol 2005, 42(7):611-623.
-
(2005)
Fungal Genet Biol
, vol.42
, Issue.7
, pp. 611-623
-
-
Panabieres, F.1
Amselem, J.2
Galiana, E.3
Le Berre, J.Y.4
-
12
-
-
29844436042
-
Microarray analysis of expressed sequence tags from haustoria of the rust fungus Uromyces fabae
-
Jakupovic M, Heintz M, Reichmann P, Mendgen K, Hahn M: Microarray analysis of expressed sequence tags from haustoria of the rust fungus Uromyces fabae. Fungal Genet Biol 2006, 43(1):8-19.
-
(2006)
Fungal Genet Biol
, vol.43
, Issue.1
, pp. 8-19
-
-
Jakupovic, M.1
Heintz, M.2
Reichmann, P.3
Mendgen, K.4
Hahn, M.5
-
13
-
-
19444373828
-
A comparative genomic analysis of ESTs from Ustilago maydis
-
Austin R, Provart NJ, Sacadura NT, Nugent KG, Babu M, Saville BJ: A comparative genomic analysis of ESTs from Ustilago maydis Funct Integr Geriomics 2004, 4(4):207-218.
-
(2004)
Funct Integr Geriomics
, vol.4
, Issue.4
, pp. 207-218
-
-
Austin, R.1
Provart, N.J.2
Sacadura, N.T.3
Nugent, K.G.4
Babu, M.5
Saville, B.J.6
-
14
-
-
0842305030
-
Gene expression during Ustilago maydis diploid filamentous growth: EST library creation and analyses
-
Nugent KG, Choffe K, Saville BJ: Gene expression during Ustilago maydis diploid filamentous growth: EST library creation and analyses. Fungal Genet Biol 2004, 41(3):349-360.
-
(2004)
Fungal Genet Biol
, vol.41
, Issue.3
, pp. 349-360
-
-
Nugent, K.G.1
Choffe, K.2
Saville, B.J.3
-
15
-
-
0037134512
-
Elucidation of the metabolic fate of glucose in the filamentous fungus Trichoderma reesei using expressed sequence tag (EST) analysis and cDNA microarrays
-
Chambergo FS, Bonaccorsi ED, Ferreira AJ, Ramos AS, Ferreira JRJJR, Abrahao-Neto J, Farah JP, El-Dorry H: Elucidation of the metabolic fate of glucose in the filamentous fungus Trichoderma reesei using expressed sequence tag (EST) analysis and cDNA microarrays. J Biol Chem 2002, 277(16):13983-13988.
-
(2002)
J Biol Chem
, vol.277
, Issue.16
, pp. 13983-13988
-
-
Chambergo, F.S.1
Bonaccorsi, E.D.2
Ferreira, A.J.3
Ramos, A.S.4
Ferreira, J.R.J.J.R.5
Abrahao-Neto, J.6
Farah, J.P.7
El-Dorry, H.8
-
16
-
-
84873055613
-
Trichoderma reesei EST database and Mitochondrial genome
-
Trichoderma reesei EST database and Mitochondrial genome [http://trichoderma.iq.usp.br/TrEST.html]
-
-
-
-
17
-
-
0042858149
-
Transcriptional regulation of biomass-degrading enzymes in the filamentous fungus Trichoderma reesei
-
Foreman PK, Brown D, Dankmeyer L, Dean R, Diener S, Dunn-Coleman NS, Goedegebuur F, Houfek TD, England GJ, Kelley AS, et al.: Transcriptional regulation of biomass-degrading enzymes in the filamentous fungus Trichoderma reesei. J Biol Chem 2003, 278(34):31988-31997.
-
(2003)
J Biol Chem
, vol.278
, Issue.34
, pp. 31988-31997
-
-
Foreman, P.K.1
Brown, D.2
Dankmeyer, L.3
Dean, R.4
Diener, S.5
Dunn-Coleman, N.S.6
Goedegebuur, F.7
Houfek, T.D.8
England, G.J.9
Kelley, A.S.10
-
18
-
-
9144242436
-
Characterization of the protein processing and secretion pathways in a comprehensive set of expressed sequence tags from Trichoderma reesei
-
Diener SE, Dunn-Coleman N, Foreman P, Houfek TD, Teunissen PJ, van Solingen P, Dankmeyer L, Mitchell TK, Ward M, Dean RA: Characterization of the protein processing and secretion pathways in a comprehensive set of expressed sequence tags from Trichoderma reesei. FEMS Microbiol Lett 2004, 230(2):275-282.
-
(2004)
FEMS Microbiol Lett
, vol.230
, Issue.2
, pp. 275-282
-
-
Diener, S.E.1
Dunn-Coleman, N.2
Foreman, P.3
Houfek, T.D.4
Teunissen, P.J.5
van Solingen, P.6
Dankmeyer, L.7
Mitchell, T.K.8
Ward, M.9
Dean, R.A.10
-
19
-
-
16844387542
-
Identification of genes with a biocontrol function in Trichoderma harzianum mycellium using the expressed sequence tag approach
-
Liu PG, Yang Q: Identification of genes with a biocontrol function in Trichoderma harzianum mycellium using the expressed sequence tag approach. Res Microbiol 2005, 156(3):416-423.
-
(2005)
Res Microbiol
, vol.156
, Issue.3
, pp. 416-423
-
-
Liu, P.G.1
Yang, Q.2
-
20
-
-
33644889632
-
Common features and interesting differences in transcriptional responses to secretion stress in the fungi Trichoderma reesei and Saccharomyces cerevisiae
-
Arvas M, Pakula T, Lanthaler K, Saloheimo M, Valkonen M, Suortti T, Robson G, Penttila M: Common features and interesting differences in transcriptional responses to secretion stress in the fungi Trichoderma reesei and Saccharomyces cerevisiae. BMC Genomics 2006, 7(1):32.
-
(2006)
BMC Genomics
, vol.7
, Issue.1
, pp. 32
-
-
Arvas, M.1
Pakula, T.2
Lanthaler, K.3
Saloheimo, M.4
Valkonen, M.5
Suortti, T.6
Robson, G.7
Penttila, M.8
-
21
-
-
0031978181
-
Base-calling of automated sequencer traces using phred. II. Error probabilities
-
Ewing B, Green P: Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res 1998, 8(3):186-194.
-
(1998)
Genome Res
, vol.8
, Issue.3
, pp. 186-194
-
-
Ewing, B.1
Green, P.2
-
22
-
-
0034069495
-
Gene ontology: Tool for the unification of biology. The Gene Ontology Consortium
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, et al.: Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 2000, 25(1):25-29.
-
(2000)
Nat Genet
, vol.25
, Issue.1
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
-
23
-
-
24644503098
-
Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research
-
Conesa A, Gotz S, Garcia-Gomez JM, Terol J, Talon M, Robles M: Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 2005, 21(18):3674-3676.
-
(2005)
Bioinformatics
, vol.21
, Issue.18
, pp. 3674-3676
-
-
Conesa, A.1
Gotz, S.2
Garcia-Gomez, J.M.3
Terol, J.4
Talon, M.5
Robles, M.6
-
24
-
-
84873060303
-
-
AmiGO TrichoEST
-
AmiGO TrichoEST [http://www.trichoderma.org/cgi-bin/amigo_24l3/go.cgi]
-
-
-
-
25
-
-
3042521098
-
Improved prediction of signal peptides: SignalP 3.0
-
Bendtsen JD, Nielsen H, von Heijne G, Brunak S: Improved prediction of signal peptides: SignalP 3.0. J Mol Biol 2004, 340(4):783-795.
-
(2004)
J Mol Biol
, vol.340
, Issue.4
, pp. 783-795
-
-
Bendtsen, J.D.1
Nielsen, H.2
von Heijne, G.3
Brunak, S.4
-
26
-
-
0034775004
-
Hydrophobins: Multipurpose proteins
-
Wosten HA: Hydrophobins: multipurpose proteins. Annu Rev Microbiol 2001, 55:625-646.
-
(2001)
Annu Rev Microbiol
, vol.55
, pp. 625-646
-
-
Wosten, H.A.1
-
27
-
-
24344501018
-
Hydrophobins: The protein-amphiphiles of filamentous fungi
-
Linder MB, Szilvay GR, Nakari-Setala T, Penttila ME: Hydrophobins: the protein-amphiphiles of filamentous fungi. FEMS Microbiol Rev 2005, 29(5):877-896.
-
(2005)
FEMS Microbiol Rev
, vol.29
, Issue.5
, pp. 877-896
-
-
Linder, M.B.1
Szilvay, G.R.2
Nakari-Setala, T.3
Penttila, M.E.4
-
28
-
-
0020338406
-
The imported preprotein of the proteolipid subunit of the mitochondrial ATP synthase from Neurospora crossa. Molecular cloning and sequencing of the mRNA
-
Viebrock A, Perz A, Sebald W: The imported preprotein of the proteolipid subunit of the mitochondrial ATP synthase from Neurospora crossa. Molecular cloning and sequencing of the mRNA. Embo J 1982, 1(5):565-571.
-
(1982)
Embo J
, vol.1
, Issue.5
, pp. 565-571
-
-
Viebrock, A.1
Perz, A.2
Sebald, W.3
-
29
-
-
0034800374
-
InterProScan - An integration platform for the signature-recognition methods in InterPro
-
Zdobnov EM, Apweiler R. InterProScan - an integration platform for the signature-recognition methods in InterPro. Bioinformatics 2001, 17(9):847-848.
-
(2001)
Bioinformatics
, vol.17
, Issue.9
, pp. 847-848
-
-
Zdobnov, E.M.1
Apweiler, R.2
-
30
-
-
9144257886
-
The Pfam protein families database
-
(Database issue)
-
Bateman A, Coin L, Durbin P, Finn RD, Hollich V, Griffiths-Jones S, Khanna A, Marshall M, Moxon S, Sonnhammer EL, et al.: The Pfam protein families database. Nucleic Acids Res 2004, 32(Database issue):D138-141.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Bateman, A.1
Coin, L.2
Durbin, P.3
Finn, R.D.4
Hollich, V.5
Griffiths-Jones, S.6
Khanna, A.7
Marshall, M.8
Moxon, S.9
Sonnhammer, E.L.10
-
31
-
-
33644876022
-
The PROSITE database
-
(Database issue)
-
Hulo N, Bairoch A, Bulliard V, Cerutti L, De Castro E, Langendijk-Genevaux PS, Pagni M, Sigrist CJ: The PROSITE database. Nucleic Acids Res 2006, 34(Database issue):D227-230.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Hulo, N.1
Bairoch, A.2
Bulliard, V.3
Cerutti, L.4
De Castro, E.5
Langendijk-Genevaux, P.S.6
Pagni, M.7
Sigrist, C.J.8
-
32
-
-
13444305296
-
The ProDom database of protein domain families: More emphasis on 3D
-
(Database issue)
-
Bru C, Courcelle E, Carrere S, Beausse Y, Dalmar S, Kahn D: The ProDom database of protein domain families: more emphasis on 3D. Nucleic Acids Res 2005, 33(Database issue):D212-215.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Bru, C.1
Courcelle, E.2
Carrere, S.3
Beausse, Y.4
Dalmar, S.5
Kahn, D.6
-
33
-
-
0031813405
-
The PRINTS protein fingerprint database in its fifth year
-
Attwood TK, Beck ME, Flower DR, Scordis P, Selley JN: The PRINTS protein fingerprint database in its fifth year. Nucleic Acids Res 1998, 26(1):304-308.
-
(1998)
Nucleic Acids Res
, vol.26
, Issue.1
, pp. 304-308
-
-
Attwood, T.K.1
Beck, M.E.2
Flower, D.R.3
Scordis, P.4
Selley, J.N.5
-
35
-
-
33644877451
-
SMART 5: Domains in the context of genomes and networks
-
(Database issue)
-
Letunic I, Copley RR, Pils B, Pinkert S, Schultz J, Bork P: SMART 5: domains in the context of genomes and networks. Nucleic Acids Res 2006, 34(Database issue):D257-260.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Letunic, I.1
Copley, R.R.2
Pils, B.3
Pinkert, S.4
Schultz, J.5
Bork, P.6
-
36
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25(17):3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
37
-
-
0036266680
-
Aspartyl protease from Trichoderma harzianum CECT 2413: Cloning and characterization
-
Delgado-Jarana J, Rincón AM, Benítez T: Aspartyl protease from Trichoderma harzianum CECT 2413: cloning and characterization. Microbiology 2002, 148(Pt 5):1305-1315.
-
(2002)
Microbiology
, vol.148
, Issue.PART 5
, pp. 1305-1315
-
-
Delgado-Jarana, J.1
Rincón, A.M.2
Benítez, T.3
-
38
-
-
13844314668
-
Detection of putative peptide synthetase genes in Trichoderma species: Application of this method to the cloning of a gene from T. harzianum CECT 2413
-
Vizcaíno JA, Sanz L, Cardoza RE, Monte E, Gutiérrez S: Detection of putative peptide synthetase genes in Trichoderma species: application of this method to the cloning of a gene from T. harzianum CECT 2413. FEMS Microbiol Lett 2005, 244(1):139-148.
-
(2005)
FEMS Microbiol Lett
, vol.244
, Issue.1
, pp. 139-148
-
-
Vizcaíno, J.A.1
Sanz, L.2
Cardoza, R.E.3
Monte, E.4
Gutiérrez, S.5
-
39
-
-
24944502751
-
Comparative analysis of 87,000 expressed sequence tags from the fumonisin-producing fungus Fusarium verticillioides
-
Brown DW, Cheung F, Proctor RH, Butchko RA, Zheng L, Lee Y, Utterback T, Smith S, Feldblyum T, Glenn AE, et al.: Comparative analysis of 87,000 expressed sequence tags from the fumonisin-producing fungus Fusarium verticillioides. Fungal Genet Biol 2005, 42(10):848-861.
-
(2005)
Fungal Genet Biol
, vol.42
, Issue.10
, pp. 848-861
-
-
Brown, D.W.1
Cheung, F.2
Proctor, R.H.3
Butchko, R.A.4
Zheng, L.5
Lee, Y.6
Utterback, T.7
Smith, S.8
Feldblyum, T.9
Glenn, A.E.10
-
40
-
-
33645908799
-
ThPTR2, a di/tri-peptide transporter gene from Trichoderma harzianum
-
Vizcaíno JA, Cardoza RE, Hauser M, Hermosa P, Rey M, Llobell A, Becker JM, Gutiérrez S, Monte E: ThPTR2, a di/tri-peptide transporter gene from Trichoderma harzianum. Fungal Genet Biol 2006, 43(4):234-246.
-
(2006)
Fungal Genet Biol
, vol.43
, Issue.4
, pp. 234-246
-
-
Vizcaíno, J.A.1
Cardoza, R.E.2
Hauser, M.3
Hermosa, P.4
Rey, M.5
Llobell, A.6
Becker, J.M.7
Gutiérrez, S.8
Monte, E.9
-
41
-
-
33644816388
-
Cloning and characterization of the ergl gene of Trichoderma harzianum: Effect of the ergl silencing on ergosterol biosynthesis and resistance to terbinafine
-
Cardoza RE, Vizcaíno JA, Hermosa MR, Sousa S, González FJ, Llobell A, Monte E, Gutiérrez S: Cloning and characterization of the ergl gene of Trichoderma harzianum: Effect of the ergl silencing on ergosterol biosynthesis and resistance to terbinafine. Fungal Genet Biol 2006, 43(3):164-178.
-
(2006)
Fungal Genet Biol
, vol.43
, Issue.3
, pp. 164-178
-
-
Cardoza, R.E.1
Vizcaíno, J.A.2
Hermosa, M.R.3
Sousa, S.4
González, F.J.5
Llobell, A.6
Monte, E.7
Gutiérrez, S.8
-
42
-
-
3843056832
-
Isolation and characterization of PRAI, a trypsin-like protease from the biocontrol agent Trichoderma harzianum CECT 2413 displaying nematicidal activity
-
Suárez B, Rey M, Castillo P, Monte E, Llobell A: Isolation and characterization of PRAI, a trypsin-like protease from the biocontrol agent Trichoderma harzianum CECT 2413 displaying nematicidal activity. Appl Microbiol Biotechnol 2004, 65(1):46-55.
-
(2004)
Appl Microbiol Biotechnol
, vol.65
, Issue.1
, pp. 46-55
-
-
Suárez, B.1
Rey, M.2
Castillo, P.3
Monte, E.4
Llobell, A.5
-
43
-
-
27644495321
-
Proteomic analysis of secreted proteins from Trichoderma harzianum. Identification of a fungal cell wall-induced aspartic protease
-
Suárez MB, Sanz L, Chamorro MI, Rey M, González FJ, Llobell A, Monte E: Proteomic analysis of secreted proteins from Trichoderma harzianum. Identification of a fungal cell wall-induced aspartic protease. Fungal Genet Biol 2005, 42(11):924-934.
-
(2005)
Fungal Genet Biol
, vol.42
, Issue.11
, pp. 924-934
-
-
Suárez, M.B.1
Sanz, L.2
Chamorro, M.I.3
Rey, M.4
González, F.J.5
Llobell, A.6
Monte, E.7
-
44
-
-
8844222632
-
Cell wall-degrading isoenzyme profiles of Trichoderma biocontrol strains show correlation with rDNA taxonomic species
-
Sanz L, Montero M, Grondona I, Vizcaíno JA, Llobell A, Hermosa R, Monte E: Cell wall-degrading isoenzyme profiles of Trichoderma biocontrol strains show correlation with rDNA taxonomic species. Curr Genet 2004, 46:277-286.
-
(2004)
Curr Genet
, vol.46
, pp. 277-286
-
-
Sanz, L.1
Montero, M.2
Grondona, I.3
Vizcaíno, J.A.4
Llobell, A.5
Hermosa, R.6
Monte, E.7
-
45
-
-
84873055255
-
Sequencing, annotation and whole genome analysis of the Trichoderma reesei genome
-
Vienna, Austria
-
Martínez DA, Berka RM, Saloheimo M, Henrissat B, Cullen D, Magnuson J, López de León A, Arvas M, Baker SE, Harris P, et al.: Sequencing, annotation and whole genome analysis of the Trichoderma reesei genome. 9th International Workshop on Trichoderma and Gliocladium. 2006; Vienna, Austria 2006.
-
(2006)
9th International Workshop on Trichoderma and Gliocladium: 2006
-
-
Martínez, D.A.1
Berka, R.M.2
Saloheimo, M.3
Henrissat, B.4
Cullen, D.5
Magnuson, J.6
López de León, A.7
Arvas, M.8
Baker, S.E.9
Harris, P.10
-
46
-
-
33645653504
-
Generation, annotation, and analysis of an extensive Aspergillus niger EST collection
-
Semova N, Storms R, John T, Gaudet P, Ulycznyj P, Min XJ, Sun J, Butler G, Tsang A: Generation, annotation, and analysis of an extensive Aspergillus niger EST collection. BMC Microbiol 2006, 6(1):7.
-
(2006)
BMC Microbiol
, vol.6
, Issue.1
, pp. 7
-
-
Semova, N.1
Storms, R.2
John, T.3
Gaudet, P.4
Ulycznyj, P.5
Min, X.J.6
Sun, J.7
Butler, G.8
Tsang, A.9
-
47
-
-
0038148621
-
EST analysis ofgenes expressed by the zygomycete pathogen Conidiobolus coronatus during growth on insect cuticle
-
Freimoser FM, Screen S, Hu G, St Leger R: EST analysis ofgenes expressed by the zygomycete pathogen Conidiobolus coronatus during growth on insect cuticle. Microbiology 2003, 149(Pt 7):1893-1900.
-
(2003)
Microbiology
, vol.149
, Issue.PART 7
, pp. 1893-1900
-
-
Freimoser, F.M.1
Screen, S.2
Hu, G.3
St. Leger, R.4
-
48
-
-
27844463518
-
Expressed sequence tag analysis of the soybean rust pathogen Phakopsora pachyrhizi
-
Posada-Buitrago ML, Frederick RD: Expressed sequence tag analysis of the soybean rust pathogen Phakopsora pachyrhizi. Fungal Genet Biol 2005, 42(12):949-962.
-
(2005)
Fungal Genet Biol
, vol.42
, Issue.12
, pp. 949-962
-
-
Posada-Buitrago, M.L.1
Frederick, R.D.2
-
49
-
-
20044380139
-
The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans
-
Loftus BJ, Fung E, Roncaglia P, Rowley D, Amedeo P, Bruno D, Vamathevan J, Miranda M, Anderson IJ, Fraser JA, et al.: The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Science 2005, 307(5713):1321-1324.
-
(2005)
Science
, vol.307
, Issue.5713
, pp. 1321-1324
-
-
Loftus, B.J.1
Fung, E.2
Roncaglia, P.3
Rowley, D.4
Amedeo, P.5
Bruno, D.6
Vamathevan, J.7
Miranda, M.8
Anderson, I.J.9
Fraser, J.A.10
-
50
-
-
21244463530
-
Post-transcriptional control of a glucoamylase gene from Trichoderma harzianum under stress conditions
-
Dana MM, Pintor-Toro JA: Post-transcriptional control of a glucoamylase gene from Trichoderma harzianum under stress conditions. Mol Microbiol 2005, 57(1):250-260.
-
(2005)
Mol Microbiol
, vol.57
, Issue.1
, pp. 250-260
-
-
Dana, M.M.1
Pintor-Toro, J.A.2
-
51
-
-
28044450149
-
A complete survey of Trichoderma chitinases reveals three distinct subgroups of family 18 chitinases
-
Seidl V, Huerner B, Seiboth B, Kubicek CP: A complete survey of Trichoderma chitinases reveals three distinct subgroups of family 18 chitinases. Febs J 2005, 272(22):5923-5939.
-
(2005)
Febs J
, vol.272
, Issue.22
, pp. 5923-5939
-
-
Seidl, V.1
Huerner, B.2
Seiboth, B.3
Kubicek, C.P.4
-
52
-
-
27944509148
-
The Trichoderma reesei hydrophobin genes hfb1 and hfb2 have diverse functions in fungal development
-
Askolin S, Penttila M, Wosten HA, Nakari-Setala T: The Trichoderma reesei hydrophobin genes hfb1 and hfb2 have diverse functions in fungal development. FEMS Microbiol Lett 2005, 253(2):281-288.
-
(2005)
FEMS Microbiol Lett
, vol.253
, Issue.2
, pp. 281-288
-
-
Askolin, S.1
Penttila, M.2
Wosten, H.A.3
Nakari-Setala, T.4
-
53
-
-
0037715424
-
Systematic discovery of analogous enzymes in thiamin biosynthesis
-
Morett E, Korbel JO, Rajan E, Saab-Rincon G, Olvera L, Olvera M, Schmidt S, Snel B, Bork P: Systematic discovery of analogous enzymes in thiamin biosynthesis. Nat Biotechnol 2003, 21(7):790-795.
-
(2003)
Nat Biotechnol
, vol.21
, Issue.7
, pp. 790-795
-
-
Morett, E.1
Korbel, J.O.2
Rajan, E.3
Saab-Rincon, G.4
Olvera, L.5
Olvera, M.6
Schmidt, S.7
Snel, B.8
Bork, P.9
-
54
-
-
0031576364
-
Dual role for the yeast TH14 gene in thiamine biosynthesis and DNA damage tolerance
-
Machado CR, Praekelt UM, de Oliveira RC, Barbosa AC, Byrne KL, Meacock PA, Menck CF: Dual role for the yeast TH14 gene in thiamine biosynthesis and DNA damage tolerance. J Mol Biol 1997, 273(1):114-121.
-
(1997)
J Mol Biol
, vol.273
, Issue.1
, pp. 114-121
-
-
Machado, C.R.1
Praekelt, U.M.2
de Oliveira, R.C.3
Barbosa, A.C.4
Byrne, K.L.5
Meacock, P.A.6
Menck, C.F.7
-
55
-
-
33644852955
-
Peptidyl-prolyl cis-trans isomerases (immunophilins) and their roles in parasite biochemistry, host-parasite interaction and antiparasitic drug action
-
Bell A, Monaghan P, Page AP: Peptidyl-prolyl cis-trans isomerases (immunophilins) and their roles in parasite biochemistry, host-parasite interaction and antiparasitic drug action. Int J Parasitol 2006, 36(3):261-276.
-
(2006)
Int J Parasitol
, vol.36
, Issue.3
, pp. 261-276
-
-
Bell, A.1
Monaghan, P.2
Page, A.P.3
-
56
-
-
25844497014
-
The cyclophilin repertoire of the fission yeast Schizosaccharomyces pombe
-
Pemberton TJ, Kay JE: The cyclophilin repertoire of the fission yeast Schizosaccharomyces pombe. Yeast 2005, 22(12):927-945.
-
(2005)
Yeast
, vol.22
, Issue.12
, pp. 927-945
-
-
Pemberton, T.J.1
Kay, J.E.2
-
57
-
-
22244464562
-
The cyclophilins
-
Wang P, Heitman J: The cyclophilins. Genome Biol 2005, 6(7):226.
-
(2005)
Genome Biol
, vol.6
, Issue.7
, pp. 226
-
-
Wang, P.1
Heitman, J.2
-
58
-
-
0036000236
-
A Magnaporthe grisea cyclophilin acts as a virulence determinant during plant infection
-
Viaud MC, Balhadere PV, Talbot NJ: A Magnaporthe grisea cyclophilin acts as a virulence determinant during plant infection. Plant Cell 2002, 14(4):917-930.
-
(2002)
Plant Cell
, vol.14
, Issue.4
, pp. 917-930
-
-
Viaud, M.C.1
Balhadere, P.V.2
Talbot, N.J.3
-
59
-
-
0035213507
-
The Aspergillus niger cypA gene encodes a cyclophilin that mediates sensitivity to the immunosuppressant cyclosporin A
-
Derkx PM, Madrid SM: The Aspergillus niger cypA gene encodes a cyclophilin that mediates sensitivity to the immunosuppressant cyclosporin A. Mol Genet Genomics 2001, 266(4):527-536.
-
(2001)
Mol Genet Genomics
, vol.266
, Issue.4
, pp. 527-536
-
-
Derkx, P.M.1
Madrid, S.M.2
-
61
-
-
16444381885
-
A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes
-
Koonin EV, Fedorova ND, Jackson JD, Jacobs AR, Krylov DM, Makarova KS, Mazumder R, Mekhedov SL, Nikolskaya AN, Rao BS, et al.: A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes. Genome Biol 2004, 5(2):R7.
-
(2004)
Genome Biol
, vol.5
, Issue.2
-
-
Koonin, E.V.1
Fedorova, N.D.2
Jackson, J.D.3
Jacobs, A.R.4
Krylov, D.M.5
Makarova, K.S.6
Mazumder, R.7
Mekhedov, S.L.8
Nikolskaya, A.N.9
Rao, B.S.10
-
62
-
-
2442629464
-
The diploid genome sequence of Candida albicans
-
Jones T, Federspiel NA, Chibana H, Dungan J, Kalman S, Magee BB, Newport G, Thorstenson YR, Agabian N, Magee PT, et al.: The diploid genome sequence of Candida albicans. Proc Natl Acad Sci U S A 2004, 101(19):7329-7334.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, Issue.19
, pp. 7329-7334
-
-
Jones, T.1
Federspiel, N.A.2
Chibana, H.3
Dungan, J.4
Kalman, S.5
Magee, B.B.6
Newport, G.7
Thorstenson, Y.R.8
Agabian, N.9
Magee, P.T.10
-
63
-
-
0023553310
-
A versatile transformation system for the cellulolytic filamentous fungus Trichoderma reesei
-
Penttila M, Nevalainen H, Ratto M, Salminen E, Knowles J: A versatile transformation system for the cellulolytic filamentous fungus Trichoderma reesei. Gene 1987, 61(2):155-164.
-
(1987)
Gene
, vol.61
, Issue.2
, pp. 155-164
-
-
Penttila, M.1
Nevalainen, H.2
Ratto, M.3
Salminen, E.4
Knowles, J.5
-
64
-
-
0034201441
-
EMBOSS: The European Molecular Biology Open Software Suite
-
Rice P, Longden I, Bleasby A: EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet 2000, 16(6):276-277.
-
(2000)
Trends Genet
, vol.16
, Issue.6
, pp. 276-277
-
-
Rice, P.1
Longden, I.2
Bleasby, A.3
-
65
-
-
0032849859
-
CAP3: A DNA sequence assembly program
-
Huang X, Madan A: CAP3: A DNA sequence assembly program. Genome Res 1999, 9(9):868-877.
-
(1999)
Genome Res
, vol.9
, Issue.9
, pp. 868-877
-
-
Huang, X.1
Madan, A.2
-
66
-
-
84873058246
-
Gene Ontology Tools
-
Gene Ontology Tools [http://www.geneontology.org/GO.tools.shtml]
-
-
-
-
69
-
-
84873056993
-
-
Aspergillus Nidulans Downloads
-
Aspergillus nidulans Downloads [http://www.broad.mit.edu/cgi-bin/ annotation/aspergillus/download_license.cgi]
-
-
-
-
70
-
-
84873056829
-
-
Ashbya Gossypii Downloads
-
Ashbya gossypii Downloads [http://agd.unibas.ch/Ashbya_gossypii/ downloads/AGD_ORF_translations_r2_1.fas
-
-
-
-
72
-
-
84873057205
-
-
ftp://ftp.wormbase.org/pub/wormbase/
-
The worm database [ftp://ftp.wormbase.org/pub/wormbase/]
-
The Worm Database
-
-
-
73
-
-
34547395323
-
-
The Candida genome database [http://www.candidagenome.org/download/ sequence/genomic_sequence/orf_protein/]
-
The Candida Genome Database
-
-
-
74
-
-
84873057086
-
-
SGTC Cneo Project: Download
-
SGTC Cneo project: Download [http://www-sequence.stanford.edu/group/ C.neoformans/download.html]
-
-
-
-
75
-
-
84873059756
-
-
FlyBase: Genome Sequence Download
-
FlyBase: Genome Sequence Download [http://flybase.bio.indiana.edu/ cgi-bin/fbseq_download.pl]
-
-
-
-
76
-
-
84873060870
-
-
Fusarium graminearum Downloads
-
Fusarium graminearum Downloads [http://www.broad.mit.edu/cgi-bin/ annotation/fusarium/download_license.cgi]
-
-
-
-
77
-
-
84873060994
-
-
Magnaporthe Grisea Downloads
-
Magnaporthe grisea Downloads [http://www.broad.mit.edu/cgi-bin/ annotation/magnaporthe/download_license.cgi]
-
-
-
-
78
-
-
84873057119
-
-
Neurospora Crassa Release 7 Downloads
-
Neurospora crassa release 7 Downloads [http://www.broad.mit.edu/cgi-bin/ annotation/fungi/neurospora_crassa_7/download_license.cgi]
-
-
-
-
79
-
-
84873058042
-
-
TIGR Rice Genome Annotation
-
TIGR Rice Genome Annotation [http://www.tigr.org/tdb/e2k1/osal/ data_download.shtml]
-
-
-
-
81
-
-
84873056120
-
The S. pombe genome at the Sanger Institute
-
ftp://ftp.sanger.ac.uk/pub/yeast/pombe/Protein_data/pompep
-
The S. pombe genome at the Sanger Institute [ftp://ftp.sanger.ac.uk/pub/ yeast/pombe/Protein_data/pompep]
-
-
-
-
83
-
-
84873055252
-
-
Ustilago Maydis Downloads
-
Ustilago maydis downloads [http://www.broad.mit.edu/cgi-bin/annotation/ fungi/ustilago_maydis/download_license.cgi]
-
-
-
|