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Volumn 349, Issue 2, 2006, Pages 701-708

Secondary structure formations of conotoxin genes: A possible role in mediating variability

Author keywords

Conotoxins; Conservation; Mutation; Secondary structures; Variability

Indexed keywords

CONOTOXIN; CYSTEINE; DISULFIDE; DNA; NUCLEIC ACID; SNAIL VENOM;

EID: 33748424968     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2006.08.081     Document Type: Article
Times cited : (5)

References (37)
  • 1
    • 20444507619 scopus 로고    scopus 로고
    • Perspective on mutagenesis and repair: the standard model and alternate modes of mutagensis
    • Miller J.H. Perspective on mutagenesis and repair: the standard model and alternate modes of mutagensis. Crit. Rev. Biochem. Mol. Biol. 40 (2005) 155-179
    • (2005) Crit. Rev. Biochem. Mol. Biol. , vol.40 , pp. 155-179
    • Miller, J.H.1
  • 3
    • 0025886466 scopus 로고
    • A constant rate of spontaneous mutation in DNA-based microbes
    • Drake J.W. A constant rate of spontaneous mutation in DNA-based microbes. Proc. Natl. Acad. Sci. USA 88 (1991) 7160-7164
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 7160-7164
    • Drake, J.W.1
  • 4
    • 0020300667 scopus 로고
    • Unique self-complementarity of palindromic sequences provides DNA structural intermediates for mutation
    • Ripley L.S., and Glickman B.W. Unique self-complementarity of palindromic sequences provides DNA structural intermediates for mutation. Cold Spring Harbour Symp. Quant. Biol. 47 (1983) 851-861
    • (1983) Cold Spring Harbour Symp. Quant. Biol. , vol.47 , pp. 851-861
    • Ripley, L.S.1    Glickman, B.W.2
  • 5
    • 0342511553 scopus 로고
    • Demonstration of the production of frameshift and base-substitution mutations by quasi-palindromic DNA sequences
    • De Boer J.G., and Ripley L.S. Demonstration of the production of frameshift and base-substitution mutations by quasi-palindromic DNA sequences. Proc. Natl. Acad. Sci. USA 81 (1984) 5528-5531
    • (1984) Proc. Natl. Acad. Sci. USA , vol.81 , pp. 5528-5531
    • De Boer, J.G.1    Ripley, L.S.2
  • 6
    • 0032541394 scopus 로고    scopus 로고
    • A hypermutable insert in an immunoglobuilin transgene contains hotspots of somatic mutation and sequences predicting highly stable structures in RNA transcript
    • Srob U., Klotz E.L., Hackett Jr. J., Kage K., Bozek G., and Martin T.E. A hypermutable insert in an immunoglobuilin transgene contains hotspots of somatic mutation and sequences predicting highly stable structures in RNA transcript. J. Exp. Med. 188 (1998) 689-698
    • (1998) J. Exp. Med. , vol.188 , pp. 689-698
    • Srob, U.1    Klotz, E.L.2    Hackett Jr., J.3    Kage, K.4    Bozek, G.5    Martin, T.E.6
  • 7
    • 0037108843 scopus 로고    scopus 로고
    • Hypermutable bases in the p53 Cancer gene are at vulnerable positions in DNA secondary structure
    • Wright B.E., Reimers J.M., Schmidt K.H., and Reschke D.K. Hypermutable bases in the p53 Cancer gene are at vulnerable positions in DNA secondary structure. Cancer Res. 62 (2002) 5641-5644
    • (2002) Cancer Res. , vol.62 , pp. 5641-5644
    • Wright, B.E.1    Reimers, J.M.2    Schmidt, K.H.3    Reschke, D.K.4
  • 8
    • 0033119454 scopus 로고    scopus 로고
    • mRNAs have greater negative folding free energies than shuffled or codon choice randomized sequences
    • Seffens W., and Digby D. mRNAs have greater negative folding free energies than shuffled or codon choice randomized sequences. Nucleic Acids Res. 27 (1999) 1578-1584
    • (1999) Nucleic Acids Res. , vol.27 , pp. 1578-1584
    • Seffens, W.1    Digby, D.2
  • 9
    • 28544440092 scopus 로고    scopus 로고
    • Statistical evidence for conserved, local secondary structure in the coding regions of eukaryotic mRNAs and pre-mRNAs
    • Meyer I.M., and Miklos I. Statistical evidence for conserved, local secondary structure in the coding regions of eukaryotic mRNAs and pre-mRNAs. Nucleic Acids Res. 33 (2005) 6338-6348
    • (2005) Nucleic Acids Res. , vol.33 , pp. 6338-6348
    • Meyer, I.M.1    Miklos, I.2
  • 10
    • 33645109593 scopus 로고    scopus 로고
    • The relation between mRNA folding and protein structure
    • Jia M., and Luo L. The relation between mRNA folding and protein structure. Biochem. Biophys. Res. Commun. 343 (2006) 177-182
    • (2006) Biochem. Biophys. Res. Commun. , vol.343 , pp. 177-182
    • Jia, M.1    Luo, L.2
  • 11
    • 0347989461 scopus 로고    scopus 로고
    • Conus venoms: a rich source of novel ion channel-targeted peptides
    • Terlau H., and Olivera B.M. Conus venoms: a rich source of novel ion channel-targeted peptides. Physiol. Rev. 84 (2004) 41-68
    • (2004) Physiol. Rev. , vol.84 , pp. 41-68
    • Terlau, H.1    Olivera, B.M.2
  • 12
    • 13044316548 scopus 로고    scopus 로고
    • Developmental shifts and species selection in gastropods
    • Duda T.F., and Palumbi S.R. Developmental shifts and species selection in gastropods. Proc. Natl. Acad. Sci. USA 96 (1999) 10272-10277
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 10272-10277
    • Duda, T.F.1    Palumbi, S.R.2
  • 14
    • 12344317094 scopus 로고    scopus 로고
    • Direct cDNA cloning of novel conopeptide precursors of the O-superfamily
    • Kauferstein S., Melaun C., and Mebs D. Direct cDNA cloning of novel conopeptide precursors of the O-superfamily. Peptides 26 (2005) 361-367
    • (2005) Peptides , vol.26 , pp. 361-367
    • Kauferstein, S.1    Melaun, C.2    Mebs, D.3
  • 15
    • 0021856417 scopus 로고
    • Signal sequences: the limits of variation
    • von Heijne G. Signal sequences: the limits of variation. J. Mol. Biol. 184 (1985) 99-105
    • (1985) J. Mol. Biol. , vol.184 , pp. 99-105
    • von Heijne, G.1
  • 17
    • 0034141795 scopus 로고    scopus 로고
    • Position specific codon conservation in hypervariable gene families
    • Conticello S.G., Pilpel Y., Glusman G., and Fainzilber M. Position specific codon conservation in hypervariable gene families. Trends Genet. 16 (2000) 58-59
    • (2000) Trends Genet. , vol.16 , pp. 58-59
    • Conticello, S.G.1    Pilpel, Y.2    Glusman, G.3    Fainzilber, M.4
  • 19
    • 0035966784 scopus 로고    scopus 로고
    • Hypermutation in bacteria and other cellular systems
    • Bridges B.A. Hypermutation in bacteria and other cellular systems. Phil. Trans. R. soc. London B. 356 (2001) 29-39
    • (2001) Phil. Trans. R. soc. London B. , vol.356 , pp. 29-39
    • Bridges, B.A.1
  • 21
    • 0029065571 scopus 로고
    • Association of increased spontaneous mutation rates with high levels of transcription
    • Datta A., and Jinks-Robertson S. Association of increased spontaneous mutation rates with high levels of transcription. Science 268 (1995) 1616-1619
    • (1995) Science , vol.268 , pp. 1616-1619
    • Datta, A.1    Jinks-Robertson, S.2
  • 22
    • 0032127810 scopus 로고    scopus 로고
    • Somatic hypermutation in the heavy chain locus correlates with transcription
    • Fukita Y., Jacobs H., and Rajewsky K. Somatic hypermutation in the heavy chain locus correlates with transcription. Immunity 9 (1998) 105-114
    • (1998) Immunity , vol.9 , pp. 105-114
    • Fukita, Y.1    Jacobs, H.2    Rajewsky, K.3
  • 26
    • 0034255358 scopus 로고    scopus 로고
    • Rapid and reliable global multiple alignments of protein sequences detected by database searches
    • Thompson J.D., Plewnial F., Thierry J.C., and Poch O. Rapid and reliable global multiple alignments of protein sequences detected by database searches. Nucleic Acid Res. 28 (2000) 2919-2926
    • (2000) Nucleic Acid Res. , vol.28 , pp. 2919-2926
    • Thompson, J.D.1    Plewnial, F.2    Thierry, J.C.3    Poch, O.4
  • 27
    • 0002287019 scopus 로고    scopus 로고
    • Zuker M., Mathews D.H., Turner Barciszewski J., and Clark B.F.C. (Eds), Kluwer Academic Publishers, Dordecht
    • In: Zuker M., Mathews D.H., Turner Barciszewski J., and Clark B.F.C. (Eds). DH RNA Biochemistry and Biotechnology (1999), Kluwer Academic Publishers, Dordecht 11-43
    • (1999) DH RNA Biochemistry and Biotechnology , pp. 11-43
  • 28
    • 0038011173 scopus 로고    scopus 로고
    • Predicting mutation frequencies in stem-loop structures of derepressed genes: implications for evolution
    • Wright B.E., Reschke D.K., Schmidt K.H., Reimers J.M., and Knight W. Predicting mutation frequencies in stem-loop structures of derepressed genes: implications for evolution. Mol. Microbiol. 48 (2003) 429-441
    • (2003) Mol. Microbiol. , vol.48 , pp. 429-441
    • Wright, B.E.1    Reschke, D.K.2    Schmidt, K.H.3    Reimers, J.M.4    Knight, W.5
  • 29
    • 2442425574 scopus 로고    scopus 로고
    • Mechanism by which transcription can regulate somatic hypermutation
    • Wright B.E., Schmidt K.H., and Minnick M.F. Mechanism by which transcription can regulate somatic hypermutation. Genes Immun. 5 (2004) 176-182
    • (2004) Genes Immun. , vol.5 , pp. 176-182
    • Wright, B.E.1    Schmidt, K.H.2    Minnick, M.F.3
  • 30
    • 23144440350 scopus 로고    scopus 로고
    • DINAMelt web server for nucleic acid melting prediction
    • Markham N.R., and Zuker M. DINAMelt web server for nucleic acid melting prediction. Nucleic Acids Res. 33 (2005) W577-W581
    • (2005) Nucleic Acids Res. , vol.33
    • Markham, N.R.1    Zuker, M.2
  • 31
    • 0029767552 scopus 로고    scopus 로고
    • Strategy for rapid immobilization of prey by a fish hunting cone snail
    • Terlau H., Schon K., Grilley M., Stocker M., Stuhmer W., and Olivera B.M. Strategy for rapid immobilization of prey by a fish hunting cone snail. Nature 381 (1996) 148-151
    • (1996) Nature , vol.381 , pp. 148-151
    • Terlau, H.1    Schon, K.2    Grilley, M.3    Stocker, M.4    Stuhmer, W.5    Olivera, B.M.6
  • 32
    • 21844466444 scopus 로고    scopus 로고
    • Molecular interaction of δ-conotoxins with voltage-gated sodium channels
    • Leipold E., Hansel A., Olivera B.M., Terlau H., and Heinemann S.H. Molecular interaction of δ-conotoxins with voltage-gated sodium channels. FEBS Lett. 579 (2005) 3881-3884
    • (2005) FEBS Lett. , vol.579 , pp. 3881-3884
    • Leipold, E.1    Hansel, A.2    Olivera, B.M.3    Terlau, H.4    Heinemann, S.H.5
  • 34
    • 0032714734 scopus 로고    scopus 로고
    • Conopeptides from Conus striatus and Conus textile by cDNA cloning
    • Lu B.S., Yu F., Zhao D., Huang P.T., and Huang C.F. Conopeptides from Conus striatus and Conus textile by cDNA cloning. Peptides 20 (1999) 1139-1144
    • (1999) Peptides , vol.20 , pp. 1139-1144
    • Lu, B.S.1    Yu, F.2    Zhao, D.3    Huang, P.T.4    Huang, C.F.5
  • 35
    • 0034681199 scopus 로고    scopus 로고
    • Highly mutagenic replication by DNA polymerase V (Umu C) provides a mechanistic basis for SOS untargeted mutagenesis
    • Maor-Soshani A., Reuven N.B., and Tomer G. Highly mutagenic replication by DNA polymerase V (Umu C) provides a mechanistic basis for SOS untargeted mutagenesis. Proc. Natl. Acad. Sci. USA 97 (2000) 565-570
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 565-570
    • Maor-Soshani, A.1    Reuven, N.B.2    Tomer, G.3
  • 37
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker M. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31 (2003) 3406-3415
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3406-3415
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.