메뉴 건너뛰기




Volumn 356, Issue 2, 2006, Pages 194-201

Method for preparing single-stranded DNA templates for Pyrosequencing using vector ligation and universal biotinylated primers

Author keywords

DNA labeling; DNA sequencing; Pyrosequencing; Single nucleotide polymorphism; Template preparation; Topoisomerase; Universal biotinylated primer

Indexed keywords

DNA; DNA SEQUENCES; GENE ENCODING; NUCLEOTIDES; PROTEINS;

EID: 33747882195     PISSN: 00032697     EISSN: 10960309     Source Type: Journal    
DOI: 10.1016/j.ab.2006.04.043     Document Type: Article
Times cited : (12)

References (25)
  • 1
    • 21644480969 scopus 로고    scopus 로고
    • Pyrosequencing: sequence typing at the speed of light
    • Diggle M.A., and Clarke S.C. Pyrosequencing: sequence typing at the speed of light. Mol. Biotechnol. 28 (2004) 129-137
    • (2004) Mol. Biotechnol. , vol.28 , pp. 129-137
    • Diggle, M.A.1    Clarke, S.C.2
  • 2
    • 17044388155 scopus 로고    scopus 로고
    • Genetic variation analyses by Pyrosequencing
    • Langaee T., and Ronaghi M. Genetic variation analyses by Pyrosequencing. Mutat. Res. 573 (2005) 96-102
    • (2005) Mutat. Res. , vol.573 , pp. 96-102
    • Langaee, T.1    Ronaghi, M.2
  • 5
    • 0036590014 scopus 로고    scopus 로고
    • Estimation of single nucleotide polymorphism allele frequency in DNA pools by using Pyrosequencing
    • Gruber J.D., Colligan P.B., and Wolford J.K. Estimation of single nucleotide polymorphism allele frequency in DNA pools by using Pyrosequencing. Hum. Genet. 110 (2002) 395-401
    • (2002) Hum. Genet. , vol.110 , pp. 395-401
    • Gruber, J.D.1    Colligan, P.B.2    Wolford, J.K.3
  • 6
    • 0037205983 scopus 로고    scopus 로고
    • Method for one-step preparation of double-stranded DNA template applicable for use with Pyrosequencing technology
    • Nordstrom T., Alderborn A., and Nyren P. Method for one-step preparation of double-stranded DNA template applicable for use with Pyrosequencing technology. J. Biochem. Biophys. Methods 52 (2002) 71-82
    • (2002) J. Biochem. Biophys. Methods , vol.52 , pp. 71-82
    • Nordstrom, T.1    Alderborn, A.2    Nyren, P.3
  • 7
    • 0038296036 scopus 로고    scopus 로고
    • Single-nucleotide polymorphism detection in plants using a single-stranded Pyrosequencing protocol with a universal biotinylated primer
    • Pacey-Miller T., and Henry R. Single-nucleotide polymorphism detection in plants using a single-stranded Pyrosequencing protocol with a universal biotinylated primer. Anal. Biochem. 317 (2003) 166-170
    • (2003) Anal. Biochem. , vol.317 , pp. 166-170
    • Pacey-Miller, T.1    Henry, R.2
  • 8
    • 0038678777 scopus 로고    scopus 로고
    • Sensitive and quantitative universal Pyrosequencing methylation analysis of CpG sites
    • Colella S., Shen L., Baggerly K.A., Issa J.P., and Krahe R. Sensitive and quantitative universal Pyrosequencing methylation analysis of CpG sites. BioTechniques 35 (2003) 146-150
    • (2003) BioTechniques , vol.35 , pp. 146-150
    • Colella, S.1    Shen, L.2    Baggerly, K.A.3    Issa, J.P.4    Krahe, R.5
  • 9
    • 0347093458 scopus 로고    scopus 로고
    • Methodology for using a universal primer to label amplified DNA segments for molecular analysis
    • Guo D.C., and Milewicz D.M. Methodology for using a universal primer to label amplified DNA segments for molecular analysis. Biotechnol. Lett. 25 (2003) 2079-2083
    • (2003) Biotechnol. Lett. , vol.25 , pp. 2079-2083
    • Guo, D.C.1    Milewicz, D.M.2
  • 11
    • 3142543137 scopus 로고    scopus 로고
    • Locking of 3′ ends of single-stranded DNA templates for improved Pyrosequencing performance
    • Utting M., Hampe J., Platzer M., and Huse K. Locking of 3′ ends of single-stranded DNA templates for improved Pyrosequencing performance. BioTechniques 37 (2004) 66-73
    • (2004) BioTechniques , vol.37 , pp. 66-73
    • Utting, M.1    Hampe, J.2    Platzer, M.3    Huse, K.4
  • 12
    • 0018972330 scopus 로고
    • A short primer for sequencing DNA cloned in the single-stranded phage vector M13mp2
    • Anderson S., Gait M.J., Mayol L., and Young I.G. A short primer for sequencing DNA cloned in the single-stranded phage vector M13mp2. Nucleic Acids Res. 8 (1980) 1731-1743
    • (1980) Nucleic Acids Res. , vol.8 , pp. 1731-1743
    • Anderson, S.1    Gait, M.J.2    Mayol, L.3    Young, I.G.4
  • 18
    • 0042387792 scopus 로고    scopus 로고
    • Extensive normal copy number variation of a beta-defensin antimicrobial-gene cluster
    • Hollox E.J., Armour J.A., and Barber J.C. Extensive normal copy number variation of a beta-defensin antimicrobial-gene cluster. Am. J. Hum. Genet. 73 (2003) 591-600
    • (2003) Am. J. Hum. Genet. , vol.73 , pp. 591-600
    • Hollox, E.J.1    Armour, J.A.2    Barber, J.C.3
  • 19
    • 29144457296 scopus 로고    scopus 로고
    • Human defensin gene copy number polymorphisms: comprehensive analysis of independent variation in alpha- and beta-defensin regions at 8p22-p23
    • Linzmeier R.M., and Ganz T. Human defensin gene copy number polymorphisms: comprehensive analysis of independent variation in alpha- and beta-defensin regions at 8p22-p23. Genomics 86 (2005) 423-430
    • (2005) Genomics , vol.86 , pp. 423-430
    • Linzmeier, R.M.1    Ganz, T.2
  • 20
    • 0029616710 scopus 로고
    • Inheritance of unequal numbers of the genes encoding the human neutrophil defensins HP-1 and HP-3
    • Mars W.M., Patmasiriwat P., Maity T., Huff V., Weil M.M., and Saunders G.F. Inheritance of unequal numbers of the genes encoding the human neutrophil defensins HP-1 and HP-3. J. Biol. Chem. 270 (1995) 30371-30376
    • (1995) J. Biol. Chem. , vol.270 , pp. 30371-30376
    • Mars, W.M.1    Patmasiriwat, P.2    Maity, T.3    Huff, V.4    Weil, M.M.5    Saunders, G.F.6
  • 22
    • 79959503826 scopus 로고    scopus 로고
    • The International HapMap Project, Nature 426 (2003) 789-796.
  • 25
    • 0345356489 scopus 로고    scopus 로고
    • Validation of fluorescence-labeled artificial nonhuman sequences for single-strand conformation polymorphism mutation detection in familial hypercholesterolemia
    • Aydin A., Luft F.C., and Bahring S. Validation of fluorescence-labeled artificial nonhuman sequences for single-strand conformation polymorphism mutation detection in familial hypercholesterolemia. Anal. Biochem. 324 (2004) 16-21
    • (2004) Anal. Biochem. , vol.324 , pp. 16-21
    • Aydin, A.1    Luft, F.C.2    Bahring, S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.