-
1
-
-
0034519206
-
-
Spudich, J. L.; Yang, C.; Jung, K.; Spudich, E. N. Annu. Rev. Cell Dev. Biol. 2000, 16, 365.
-
(2000)
Annu. Rev. Cell Dev. Biol.
, vol.16
, pp. 365
-
-
Spudich, J.L.1
Yang, C.2
Jung, K.3
Spudich, E.N.4
-
3
-
-
33748595259
-
-
Logunov, S. L.; Song, L.; El-Sayed, M. A. J. Phys. Chem. 1996, 100, 18586-18591.
-
(1996)
J. Phys. Chem.
, vol.100
, pp. 18586-18591
-
-
Logunov, S.L.1
Song, L.2
El-Sayed, M.A.3
-
4
-
-
0000259990
-
-
Kochendoerfer, G. G.; Lin, S. W.; Sakmar, T. T.; Mathies, R. A. TIBS 1999, 24, 300-305.
-
(1999)
TIBS
, vol.24
, pp. 300-305
-
-
Kochendoerfer, G.G.1
Lin, S.W.2
Sakmar, T.T.3
Mathies, R.A.4
-
5
-
-
0032987196
-
-
Haupts, U.; Tittor, J.; Oesterhelt, D. Annu. Rev. Biophys. Biomol. Struct. 1999, 28, 367.
-
(1999)
Annu. Rev. Biophys. Biomol. Struct.
, vol.28
, pp. 367
-
-
Haupts, U.1
Tittor, J.2
Oesterhelt, D.3
-
9
-
-
0030906654
-
-
Hoff, W. D.; Jung, K.; Spudich, J. L. Annu. Rev. Biophys. Biomol. Struct. 1997, 26, 223.
-
(1997)
Annu. Rev. Biophys. Biomol. Struct.
, vol.26
, pp. 223
-
-
Hoff, W.D.1
Jung, K.2
Spudich, J.L.3
-
12
-
-
0037064286
-
-
Neutze, R.; Pebay-Peyroula, E.; Edmann, E.; Royant, A.; Navarro, J.; Landau, E. Biochim. Biophys. Acta 2002, 1565, 144-167.
-
(2002)
Biochim. Biophys. Acta
, vol.1565
, pp. 144-167
-
-
Neutze, R.1
Pebay-Peyroula, E.2
Edmann, E.3
Royant, A.4
Navarro, J.5
Landau, E.6
-
14
-
-
0031820941
-
-
Chizhov, I.; Schmies, G.; Seidel, R.; Sydor, J. R.; Lüttenberg, B.; Engelhard, M. Biophys. J. 1998, 75, 999.
-
(1998)
Biophys. J.
, vol.75
, pp. 999
-
-
Chizhov, I.1
Schmies, G.2
Seidel, R.3
Sydor, J.R.4
Lüttenberg, B.5
Engelhard, M.6
-
15
-
-
0034735621
-
-
Shimono, K.; Kitami, M.; Iwamoto, M.; Kamo, N. Biophys. Chem. 2000, 87, 225.
-
(2000)
Biophys. Chem.
, vol.87
, pp. 225
-
-
Shimono, K.1
Kitami, M.2
Iwamoto, M.3
Kamo, N.4
-
16
-
-
0035576064
-
-
Shimono, K.; Iwamoto, M.; Sumi, M.; Kamo, N. Biochim. Biophys. Acta 2001, 1515, 92.
-
(2001)
Biochim. Biophys. Acta
, vol.1515
, pp. 92
-
-
Shimono, K.1
Iwamoto, M.2
Sumi, M.3
Kamo, N.4
-
17
-
-
0037150094
-
-
Shimono, K.; Furutani, Y.; Kandori, H.; Kamo, N. Biochemistry 2002, 41, 6504-6509.
-
(2002)
Biochemistry
, vol.41
, pp. 6504-6509
-
-
Shimono, K.1
Furutani, Y.2
Kandori, H.3
Kamo, N.4
-
18
-
-
0037592212
-
-
Shimono, K.; Hayashi, T.; Ikeura, Y.; Sudo, Y.; Iwamoto, M.; Kamo, N. J. Biol. Chem. 2003, 278, 23882.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 23882
-
-
Shimono, K.1
Hayashi, T.2
Ikeura, Y.3
Sudo, Y.4
Iwamoto, M.5
Kamo, N.6
-
19
-
-
0034237072
-
-
Shimono, K.; Iwamoto, M.; Sumi, M.; Kamo, N. Photochem. Photobiol. 2000, 72, 141.
-
(2000)
Photochem. Photobiol.
, vol.72
, pp. 141
-
-
Shimono, K.1
Iwamoto, M.2
Sumi, M.3
Kamo, N.4
-
20
-
-
0035923404
-
-
Ren, L.; Martin, C. H.; Wise, K. J.; Gillespie, N. B.; Luecke, H.; Lanyi, J. K.; Spudich, J. L.; Birge, R. R. Biochemistry 2001, 40, 13906-13914.
-
(2001)
Biochemistry
, vol.40
, pp. 13906-13914
-
-
Ren, L.1
Martin, C.H.2
Wise, K.J.3
Gillespie, N.B.4
Luecke, H.5
Lanyi, J.K.6
Spudich, J.L.7
Birge, R.R.8
-
21
-
-
0035909727
-
-
Hayashi, S.; Tajkhorshid, E.; Pebay-Peyroula, E.; Royant, A.; Landau, E. M.; J.; N.; Schulten, K. J. Phys. Chem. B 2001, 105, 10124-10131.
-
(2001)
J. Phys. Chem. B
, vol.105
, pp. 10124-10131
-
-
Hayashi, S.1
Tajkhorshid, E.2
Pebay-Peyroula, E.3
Royant, A.4
Landau, E.M.5
Schulten, K.6
-
22
-
-
33847086787
-
-
Nakanishi, K.; Balogh-Nair, Y.; Arnaboldi, M.; Tsujimoto, K.; Honig, B. J. Am. Chem. Soc. 1980, 102, 7945.
-
(1980)
J. Am. Chem. Soc.
, vol.102
, pp. 7945
-
-
Nakanishi, K.1
Balogh-Nair, Y.2
Arnaboldi, M.3
Tsujimoto, K.4
Honig, B.5
-
23
-
-
33845375680
-
-
Van der Steen, R.; Biesheuvel, B. L.; Lugtenburg, J. J. Am. Chem. Soc. 1986, 108, 6410.
-
(1986)
J. Am. Chem. Soc.
, vol.108
, pp. 6410
-
-
Van Der Steen, R.1
Biesheuvel, B.L.2
Lugtenburg, J.3
-
24
-
-
0022272884
-
-
Harbison, G. S.; Mulder, P. P. J.; Pardoen, J. A. Biochemistry 1985, 24, 6955.
-
(1985)
Biochemistry
, vol.24
, pp. 6955
-
-
Harbison, G.S.1
Mulder, P.P.J.2
Pardoen, J.A.3
-
25
-
-
0000997679
-
-
Harbison, G. S.; Mulder, P. P. J.; Pardoen, J. A. J. Am. Chem. Soc. 1985, 107, 4810.
-
(1985)
J. Am. Chem. Soc.
, vol.107
, pp. 4810
-
-
Harbison, G.S.1
Mulder, P.P.J.2
Pardoen, J.A.3
-
26
-
-
0028066280
-
-
Wada, M.; Sakutai, M.; Inoue, Y.; Tamura, Y.; Watanabe, Y. J. Am. Chem. Soc. 1994, 116, 1537.
-
(1994)
J. Am. Chem. Soc.
, vol.116
, pp. 1537
-
-
Wada, M.1
Sakutai, M.2
Inoue, Y.3
Tamura, Y.4
Watanabe, Y.5
-
27
-
-
0022053940
-
-
Kakitani, H.; Kakitani, T.; Rodman, H.; Honig, B. Photochem. Photobiol. 1985, 41, 471.
-
(1985)
Photochem. Photobiol.
, vol.41
, pp. 471
-
-
Kakitani, H.1
Kakitani, T.2
Rodman, H.3
Honig, B.4
-
28
-
-
0030970581
-
-
Kochendoerfer, G.; Wang, Z.; Oprian, D. D.; Mathies, R. A. Biochemistry 1997, 36, 6577-6587.
-
(1997)
Biochemistry
, vol.36
, pp. 6577-6587
-
-
Kochendoerfer, G.1
Wang, Z.2
Oprian, D.D.3
Mathies, R.A.4
-
29
-
-
0014668709
-
-
Irving, C. S.; Byers, G. W.; Leermake, P. A. J. Am. Chem. Soc. 1969, 91, 2141.
-
(1969)
J. Am. Chem. Soc.
, vol.91
, pp. 2141
-
-
Irving, C.S.1
Byers, G.W.2
Leermake, P.A.3
-
30
-
-
0014952536
-
-
Irving, C. S.; Byers, G. W.; Leermake, P. A. Biochemistry 1970, 9, 858.
-
(1970)
Biochemistry
, vol.9
, pp. 858
-
-
Irving, C.S.1
Byers, G.W.2
Leermake, P.A.3
-
32
-
-
0005853391
-
-
Birge, R. R.; Murray, L. M.; Pierce, B. M.; Akita, H.; Balogh-Nair, V.; Findsen, L. A.; Nakanishi, K. Proc. Natl. Acad. Sci., U.S.A. 1985, 82, 4117-4121.
-
(1985)
Proc. Natl. Acad. Sci., U.S.A.
, vol.82
, pp. 4117-4121
-
-
Birge, R.R.1
Murray, L.M.2
Pierce, B.M.3
Akita, H.4
Balogh-Nair, V.5
Findsen, L.A.6
Nakanishi, K.7
-
33
-
-
0023228884
-
-
Baasov, T.; Friedman, N.; Sheves, M. Biochemistry 1987, 26, 3210-3217.
-
(1987)
Biochemistry
, vol.26
, pp. 3210-3217
-
-
Baasov, T.1
Friedman, N.2
Sheves, M.3
-
34
-
-
0028559773
-
-
Hu, J.; Griffin, R. G.; Herzfeld, J. Proc. Natl. Acad. Sci. U.S.A. 1994, 91, 8880-8884.
-
(1994)
Proc. Natl. Acad. Sci. U.S.A.
, vol.91
, pp. 8880-8884
-
-
Hu, J.1
Griffin, R.G.2
Herzfeld, J.3
-
35
-
-
0033609904
-
-
Lücke, H.; Schobert, B.; Richter, H. T.; Cartailler, J. P.; Lanyi, J. K. J. Mol. Biol. 1999, 291, 899-911.
-
(1999)
J. Mol. Biol.
, vol.291
, pp. 899-911
-
-
Lücke, H.1
Schobert, B.2
Richter, H.T.3
Cartailler, J.P.4
Lanyi, J.K.5
-
36
-
-
0035964365
-
-
Royant, A.; Nollert, P.; Edmann, K.; Neutze, R.; Landau, E. M.; Pebay-Peyroula, E.; Navarro, J. Proc. Natl. Acad. Sci., U.S.A. 2001, 98, 10131-10136.
-
(2001)
Proc. Natl. Acad. Sci., U.S.A.
, vol.98
, pp. 10131-10136
-
-
Royant, A.1
Nollert, P.2
Edmann, K.3
Neutze, R.4
Landau, E.M.5
Pebay-Peyroula, E.6
Navarro, J.7
-
37
-
-
0035943457
-
-
Luecke, H.; Schobert, B.; Lanyi, J.; Spudich, E. N.; Spudich, J. L. Science 2001, 293, 1499-1503.
-
(2001)
Science
, vol.293
, pp. 1499-1503
-
-
Luecke, H.1
Schobert, B.2
Lanyi, J.3
Spudich, E.N.4
Spudich, J.L.5
-
38
-
-
0035822679
-
-
Kandori, H.; Shimono, K.; Sudo, Y.; Iwamoto, M.; Shichida, Y.; Kamo, N. Biochemistry 2001, 40, 9238-9246.
-
(2001)
Biochemistry
, vol.40
, pp. 9238-9246
-
-
Kandori, H.1
Shimono, K.2
Sudo, Y.3
Iwamoto, M.4
Shichida, Y.5
Kamo, N.6
-
39
-
-
0027218962
-
-
Greenhalgh, D. A.; Farrens, D. L.; Subramaniam, S.; Khorana, H. G. J. Biol. Chem. 1993, 268, 20305.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 20305
-
-
Greenhalgh, D.A.1
Farrens, D.L.2
Subramaniam, S.3
Khorana, H.G.4
-
40
-
-
0024978461
-
-
Mogi, T.; Marti, T.; Khorana, H. G. J. Biol. Chem. 1989, 264, 14197.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 14197
-
-
Mogi, T.1
Marti, T.2
Khorana, H.G.3
-
41
-
-
0023645105
-
-
Hackett, N. R.; Stern, L. J.; Chao, B. H.; Kronis, K. A.; Khorana, H. G. J. Biol. Chem. 1987, 262, 9277.
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 9277
-
-
Hackett, N.R.1
Stern, L.J.2
Chao, B.H.3
Kronis, K.A.4
Khorana, H.G.5
-
42
-
-
0024297167
-
-
Ahl, P. L.; Stern, L. J.; During, D.; Mogi, T.; Khorana, H. G.; Rothschild, K. J. J. Biol. Chem. 1988, 263, 13594.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 13594
-
-
Ahl, P.L.1
Stern, L.J.2
During, D.3
Mogi, T.4
Khorana, H.G.5
Rothschild, K.J.6
-
43
-
-
0038000761
-
-
Shimono, K.; Furutani, Y.; Kamo, N.; Kandori, H. Biochemistry 2003, 42, 7801-7806.
-
(2003)
Biochemistry
, vol.42
, pp. 7801-7806
-
-
Shimono, K.1
Furutani, Y.2
Kamo, N.3
Kandori, H.4
-
44
-
-
14844348202
-
-
Wanko, M.; Hoffmann, M.; Strodel, P.; Koslowski, A.; Thiel, W.; Neese, F.; Frauenheim, T.; Elstner, M. J. Phys. Chem. B 2005, 109, 3606-3615.
-
(2005)
J. Phys. Chem. B
, vol.109
, pp. 3606-3615
-
-
Wanko, M.1
Hoffmann, M.2
Strodel, P.3
Koslowski, A.4
Thiel, W.5
Neese, F.6
Frauenheim, T.7
Elstner, M.8
-
45
-
-
0035138648
-
-
Cui, Q.; Elstner, M.; Kaxiras, E.; Frauenheim, T.; Karplus, M. J. Phys. Chem. B 2001, 105, 569.
-
(2001)
J. Phys. Chem. B
, vol.105
, pp. 569
-
-
Cui, Q.1
Elstner, M.2
Kaxiras, E.3
Frauenheim, T.4
Karplus, M.5
-
46
-
-
1542779956
-
-
Elstner, M.; Porezag, D.; Jungnickel, G.; Elsner, J.; Haugk, M.; Frauenheim, T.; Suhai, S.; Seifert, G. Phys. Rev. B 1998, 58, 7260-7268.
-
(1998)
Phys. Rev. B
, vol.58
, pp. 7260-7268
-
-
Elstner, M.1
Porezag, D.2
Jungnickel, G.3
Elsner, J.4
Haugk, M.5
Frauenheim, T.6
Suhai, S.7
Seifert, G.8
-
48
-
-
0242558240
-
-
Elstner, M.; Frauenheim, T.; Suhai, S. J. Mol. Struct. 2003, 632, 29-41.
-
(2003)
J. Mol. Struct.
, vol.632
, pp. 29-41
-
-
Elstner, M.1
Frauenheim, T.2
Suhai, S.3
-
49
-
-
0141566583
-
-
Elstner, M.; Cui, Q.; Munih, P.; Kaxiras, E.; Frauenheim, T.; Karplus, M. J. Comput. Chem. 2003, 24, 565.
-
(2003)
J. Comput. Chem.
, vol.24
, pp. 565
-
-
Elstner, M.1
Cui, Q.2
Munih, P.3
Kaxiras, E.4
Frauenheim, T.5
Karplus, M.6
-
50
-
-
0346668338
-
-
Zhang, X.; Harrison, D. H. T.; Cui, Q. J. Am. Chem. Soc. 2002, 124, 14871.
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 14871
-
-
Zhang, X.1
Harrison, D.H.T.2
Cui, Q.3
-
51
-
-
0041734330
-
-
Formaneck, M. S.; Li, G.; Zhang, X.; Cui, Q. J. Theor. Comput. Chem. 2002, 1, 53.
-
(2002)
J. Theor. Comput. Chem.
, vol.1
, pp. 53
-
-
Formaneck, M.S.1
Li, G.2
Zhang, X.3
Cui, Q.4
-
52
-
-
0037076062
-
-
Cui, Q.; Elstner, M.; Karplus, M. J. Phys. Chem. B 2002, 106, 2721.
-
(2002)
J. Phys. Chem. B
, vol.106
, pp. 2721
-
-
Cui, Q.1
Elstner, M.2
Karplus, M.3
-
54
-
-
0041786771
-
-
Li, G.; Zhang, X.; Cui, Q. J. Phys. Chem. B 2003, 107, 8643.
-
(2003)
J. Phys. Chem. B
, vol.107
, pp. 8643
-
-
Li, G.1
Zhang, X.2
Cui, Q.3
-
55
-
-
31544463548
-
-
König, P. H.; Ghosh, N.; Hoffmann, M.; Elstner, M.; Tajkhorshid, E.; Frauenheim, T.; Cui, Q. J. Phys. Chem. A 2006, 110, 548.
-
(2006)
J. Phys. Chem. A
, vol.110
, pp. 548
-
-
König, P.H.1
Ghosh, N.2
Hoffmann, M.3
Elstner, M.4
Tajkhorshid, E.5
Frauenheim, T.6
Cui, Q.7
-
56
-
-
0037087047
-
-
Zhou, H.; Tajkhorshid, E.; Frauenheim, T.; Suhai, S.; Elstner, M. Chem. Phys. 2002, 277, 91-103.
-
(2002)
Chem. Phys.
, vol.277
, pp. 91-103
-
-
Zhou, H.1
Tajkhorshid, E.2
Frauenheim, T.3
Suhai, S.4
Elstner, M.5
-
57
-
-
1442360635
-
-
Fantacci, S.; Migani, A.; Olivucci, M. J. Phys. Chem. A 2004, 108, 1208-1213.
-
(2004)
Phys. Chem. A
, vol.108
, pp. 1208-1213
-
-
Fantacci, S.1
Migani, A.2
Olivucci, M.J.3
-
59
-
-
0037091302
-
-
Lee, H. M.; Kim, J.; Kim, J. C.; Kim, K. S. J. Chem. Phys. 2002, 116, 6549-6559.
-
(2002)
J. Chem. Phys.
, vol.116
, pp. 6549-6559
-
-
Lee, H.M.1
Kim, J.2
Kim, J.C.3
Kim, K.S.4
-
61
-
-
0003984036
-
-
Max Planck Institut für Strahlenchemie, Mülheim
-
Neese, F. "ORCA - An ab initio, density functional and semiempirical program package, Version 2.3 - Revision 09, February 2004", Max Planck Institut für Strahlenchemie, Mülheim., 2004.
-
(2004)
ORCA - An Ab Initio, Density Functional and Semiempirical Program Package, Version 2.3 - Revision 09, February 2004
-
-
Neese, F.1
-
62
-
-
26344435738
-
-
Schaefer, A.; Horn, H.; Ahlrichs, R. J. Chem. Phys. 1992, 97, 2571.
-
(1992)
J. Chem. Phys.
, vol.97
, pp. 2571
-
-
Schaefer, A.1
Horn, H.2
Ahlrichs, R.3
-
65
-
-
0037473489
-
-
Koslowski, A.; Beck, M. E.; Thiel, W. J. Comput. Chem. 2003, 24, 714-726.
-
(2003)
J. Comput. Chem.
, vol.24
, pp. 714-726
-
-
Koslowski, A.1
Beck, M.E.2
Thiel, W.3
-
67
-
-
0028324569
-
-
Sasaki, J.; Lany, J. K.; Needleman, R.; Yoshizawa, T.; Maeda, A. Biochemistry 1994, 33, 3178.
-
(1994)
Biochemistry
, vol.33
, pp. 3178
-
-
Sasaki, J.1
Lany, J.K.2
Needleman, R.3
Yoshizawa, T.4
Maeda, A.5
-
68
-
-
0028864699
-
-
Brown, L. S.; Sasaki, J.; Kandori, H.; Maeda, A.; Needleman, R.; Lanyi, J. K. J. Biol. Chem. 1995, 270, 27122-27126.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 27122-27126
-
-
Brown, L.S.1
Sasaki, J.2
Kandori, H.3
Maeda, A.4
Needleman, R.5
Lanyi, J.K.6
-
69
-
-
84986512474
-
-
Brooks, B. R.; Bruccoleri, R. E.; Olafson, B. E.; States, D. J.; Swaminathan, S.; Karplus, M. J. Comput. Chem. 1983, 4, 187.
-
(1983)
J. Comput. Chem.
, vol.4
, pp. 187
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.E.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
70
-
-
0038056334
-
-
Dinner, A. R.; Lopez, X.; Karplus, M. Theor. Chem. Acc. 2003, 109, 118.
-
(2003)
Theor. Chem. Acc.
, vol.109
, pp. 118
-
-
Dinner, A.R.1
Lopez, X.2
Karplus, M.3
-
71
-
-
0031561292
-
-
Simonson, T.; Archontis, G.; Karplus, M. J. Phys. Chem. B 1997, 101, 8349.
-
(1997)
J. Phys. Chem. B
, vol.101
, pp. 8349
-
-
Simonson, T.1
Archontis, G.2
Karplus, M.3
-
72
-
-
19944408652
-
-
König, P.; Hoffmann, M.; Frauenheim, T.; Cui, Q. J. Phys. Chem. B 2005, 109, 9082.
-
(2005)
J. Phys. Chem. B
, vol.109
, pp. 9082
-
-
König, P.1
Hoffmann, M.2
Frauenheim, T.3
Cui, Q.4
-
76
-
-
0242365465
-
-
Nonella, M.; Mathias, G.; Tavan, P. J. Phys. Chem. A 2003, 107, 8638.
-
(2003)
J. Phys. Chem. A
, vol.107
, pp. 8638
-
-
Nonella, M.1
Mathias, G.2
Tavan, P.3
-
77
-
-
0033567092
-
-
Belrhali, H.; Nollert, P.; Royant, A.; Menzel, C.; Rosenbusch, J.; Landau, E.; Pebay-Peyroula, E. Structure 1999, 7, 909.
-
(1999)
Structure
, vol.7
, pp. 909
-
-
Belrhali, H.1
Nollert, P.2
Royant, A.3
Menzel, C.4
Rosenbusch, J.5
Landau, E.6
Pebay-Peyroula, E.7
-
78
-
-
0032546920
-
-
Luecke, H.; Richter, H. T.; Lanyi, J. K. Science 1998, 250, 1934.
-
(1998)
Science
, vol.250
, pp. 1934
-
-
Luecke, H.1
Richter, H.T.2
Lanyi, J.K.3
-
81
-
-
0035951066
-
-
Kandori, H.; Furutani, Y.; Shimono, K.; Shichida, Y.; Kamo, N. Biochemistry 2001, 40, 15693-15698.
-
(2001)
Biochemistry
, vol.40
, pp. 15693-15698
-
-
Kandori, H.1
Furutani, Y.2
Shimono, K.3
Shichida, Y.4
Kamo, N.5
-
83
-
-
0034818544
-
-
Houjou, H.; Inoue, Y.; Sakurai, M. J. Phys. Chem. B 2001, 105, 867-879.
-
(2001)
J. Phys. Chem. B
, vol.105
, pp. 867-879
-
-
Houjou, H.1
Inoue, Y.2
Sakurai, M.3
-
84
-
-
0001718556
-
-
Mathies, R.; Stryer, L. Proc. Natl. Acad. Sci., U.S.A. 1976, 73, 2169.
-
(1976)
Proc. Natl. Acad. Sci., U.S.A.
, vol.73
, pp. 2169
-
-
Mathies, R.1
Stryer, L.2
-
85
-
-
0034662988
-
-
González-Luque, R.; Garavelli, M.; Bernardi, F.; Merchán, M.; Robb, M. A.; Olivucci, M. Proc. Natl. Acad. Sci., U.S.A. 2000, 97, 9379.
-
(2000)
Proc. Natl. Acad. Sci., U.S.A.
, vol.97
, pp. 9379
-
-
González-Luque, R.1
Garavelli, M.2
Bernardi, F.3
Merchán, M.4
Robb, M.A.5
Olivucci, M.6
-
86
-
-
0142095000
-
-
Cembran, A.; Bernardi, F.; Olivucci, M.; Garavelli, M. J. Am. Chem. Soc. 2003, 125, 12509.
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 12509
-
-
Cembran, A.1
Bernardi, F.2
Olivucci, M.3
Garavelli, M.4
-
87
-
-
11444267304
-
-
Hufen, J.; Sugihara, M.; Buss, V. J. Phys. Chem. 2004, 108, 20419.
-
(2004)
J. Phys. Chem.
, vol.108
, pp. 20419
-
-
Hufen, J.1
Sugihara, M.2
Buss, V.3
-
89
-
-
0030010796
-
-
Riesle, J.; Oesterheld, D.; Dechner, N. A.; Heberle, J. Biochemistry 1996, 35, 6635.
-
(1996)
Biochemistry
, vol.35
, pp. 6635
-
-
Riesle, J.1
Oesterheld, D.2
Dechner, N.A.3
Heberle, J.4
-
90
-
-
4344595068
-
-
Hayashi, S.; Tajkhorshid, E.; Kandori, H.; Schulten, K. J. Am. Chem. Soc. 2004, 126, 10516.
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 10516
-
-
Hayashi, S.1
Tajkhorshid, E.2
Kandori, H.3
Schulten, K.4
-
91
-
-
0000259990
-
-
Kochendoerfer, G.; Lin, S. W.; Sakmar, T. P.; Mathies, R. A. Trends Biochem. Sci. 1999, 24, 300.
-
(1999)
Trends Biochem. Sci.
, vol.24
, pp. 300
-
-
Kochendoerfer, G.1
Lin, S.W.2
Sakmar, T.P.3
Mathies, R.A.4
-
93
-
-
0028316890
-
-
Lin, S.; Imamoto, Y.; Fukada, Y.; Shichida, Y.; Yoshizawa, T.; Mathies, R. Biochemistry 1994, 33, 2151.
-
(1994)
Biochemistry
, vol.33
, pp. 2151
-
-
Lin, S.1
Imamoto, Y.2
Fukada, Y.3
Shichida, Y.4
Yoshizawa, T.5
Mathies, R.6
-
94
-
-
0015228142
-
-
Heyde, M. E.; Gill, D.; Kilponen, R. G.; Rimai, L. J. Am. Chem. Soc. 1979, 93, 6776.
-
(1979)
J. Am. Chem. Soc.
, vol.93
, pp. 6776
-
-
Heyde, M.E.1
Gill, D.2
Kilponen, R.G.3
Rimai, L.4
-
96
-
-
0038016725
-
-
Zhang, Y.; Kua, J.; McCammon, J. A. J. Phys. Chem. B 2003, 107, 4459.
-
(2003)
J. Phys. Chem. B
, vol.107
, pp. 4459
-
-
Zhang, Y.1
Kua, J.2
McCammon, J.A.3
-
97
-
-
0001246575
-
-
Lin, S. W.; Groesbeek, M.; van der Hoef, I.; Verdegem, P.; Lugtenburg, J.; Mathies, R. A. J. Phys. Chem. B 1998, 102, 2787.
-
(1998)
J. Phys. Chem. B
, vol.102
, pp. 2787
-
-
Lin, S.W.1
Groesbeek, M.2
Van Der Hoef, I.3
Verdegem, P.4
Lugtenburg, J.5
Mathies, R.A.6
-
98
-
-
0347948267
-
-
Schreiber, M.; Buss, V.; Sugihara, M. J. Chem. Phys. 2003, 119, 12045-12048.
-
(2003)
J. Chem. Phys.
, vol.119
, pp. 12045-12048
-
-
Schreiber, M.1
Buss, V.2
Sugihara, M.3
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99
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33747791506
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note
-
The use of local exchange functionals in TDDFT as well as an unbalanced inclusion of dynamic and static correlation in methods like CASSCF or CIS are problematic in this context.
-
-
-
-
100
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-
33747766615
-
-
note
-
h (see Supporting Information of ref 44). Only core orbitals were frozen.
-
-
-
-
101
-
-
33747804080
-
-
note
-
This value has a direct relationship to the excitation energy, as discussed in detail later.
-
-
-
-
102
-
-
33747781888
-
-
note
-
Other geometrical variations are in the order of 0.3 Å and of minor importance. They may be due to differences in the applied quantum mechanical potentials or to local minima found by different optimization techniques. As will be discussed below (sec. III F), these variables show fluctuations of similar magnitude along MD trajectories.
-
-
-
-
103
-
-
33747771848
-
-
note
-
This deviation from the crystal structures was already pointed out in ref 80.
-
-
-
-
104
-
-
33747748262
-
-
note
-
44.
-
-
-
-
105
-
-
33747787469
-
-
note
-
Whether the predicted state crossing is realistic or not, cannot be safely concluded from the current calculations, since the accuracy of SORCI and CASPT2 for the doubly excited state energy may be lower than for the singly excited one and no experimental evidence has been put forward about the first. Hence, we omit further discussion of the doubly excited state.
-
-
-
-
106
-
-
33747764314
-
-
note
-
16.19 and corresponds to the mutation ppR → bR. The residue numbers refer to ppR.
-
-
-
-
107
-
-
33747764977
-
-
note
-
Using the chromophore structures obtained by QM/MM optimization of the whole protein, a distinction between distortions induced by steric confinement and effects induced by electrostatic interactions with the protein is not possible.
-
-
-
-
108
-
-
33747779825
-
-
note
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44,98.
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