Seascape Genetics: A Coupled Oceanographic-Genetic Model Predicts Population Structure of Caribbean Corals

Current Biology

Volumn 16, Issue 16, 2006, Pages 1622-1626

  Galindo, Heather M ^a   Olson, Donald B ^b   Palumbi, Stephen R ^a  

^a STANFORD UNIVERSITY   (United States)

^b UNIVERSITY OF MIAMI   (United States)

Author keywords

EVO_ECOL

Indexed keywords

ANIMAL; ANTHOZOA; ARTICLE; BIOLOGICAL MODEL; BIOLOGY; CENTRAL AMERICA; COMPARATIVE STUDY; DEMOGRAPHY; ENVIRONMENTAL PROTECTION; GENETICS; LARVA; MARINE BIOLOGY; PHYSIOLOGY; POPULATION DYNAMICS; POPULATION GENETICS; THEORETICAL MODEL; WATER FLOW;

ANIMALS; ANTHOZOA; CARIBBEAN REGION; CONSERVATION OF NATURAL RESOURCES; DEMOGRAPHY; GENETICS, POPULATION; LARVA; MARINE BIOLOGY; MODELS, GENETIC; MODELS, THEORETICAL; POPULATION DYNAMICS; WATER MOVEMENTS;

ACROPORA; ANTHOZOA;

EID: 33747172589     PISSN: 09609822     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cub.2006.06.052     Document Type: Article

References (47)

1. Palumbi S.R. Marine reserves and Ocean neighborhoods: The spatial scale of marine populations and their management. Annual Review of Environment and Resources 29 (2004) 31-68
2. Palumbi S.R., and Hedgecock D. The life of the sea: Implications of marine population biology to conservation policy. In: Norse E.A., and Crowder L.B. (Eds). Marine conservation biology: The science of maintaining the sea's biodiversity (2005), Island Press, Washington, D.C. 33-46
3. Taylor M.S., and Hellberg M.E. Genetic evidence for local retention of pelagic larvae in a Caribbean reef fish. Science 299 (2003) 107-109
4. Waples R.S. A multispecies approach to the analysis of gene flow in marine shore fishes. Evolution Int. J. Org. Evolution 41 (1987) 385-400
5. Batteen M.L., Cipriano N.J., and Monroe J.T. A large-scale seasonal modeling study of the California Current System. J. Oceanogr. 59 (2003) 545-562
6. Cowen R.K., Paris C.B., and Srinivasan A. Scaling of connectivity in marine populations. Science 311 (2006) 522-527
7. James M.K., Armsworth P.R., Mason L.B., and Bode L. The structure of reef fish metapopulations: Modelling larval dispersal and retention patterns. Proc. R. Soc. Biol. Sci. B 269 (2002) 2079-2086
8. Paiva A.M., Hargrove J.T., Chassignet E.P., and Bleck R. Turbulent behavior of a fine mesh (1/12 degrees) numerical simulation of the North Atlantic. J. Mar. Syst. 21 (1999) 307-320
9. Young E.F., Brown J., Aldridge J.N., Horsburgh K.J., and Fernand L. Development and application of a three-dimensional baroclinic model to the study of the seasonal circulation in the Celtic Sea. Continental Shelf Research 24 (2004) 13-36
10. Hohenlohe P.A. Limits to gene flow in marine animals with planktonic larvae: models of Littorina species around Point Conception, California. Biol. J. Linn. S. Lond. 82 (2004) 169-187
11. Kimura M., and Weiss G.H. Stepping stone model of population structure and decrease of genetic correlation with distance. Genetics 49 (1964) 561-576
12. Nielsen R., and Wakeley J. Distinguishing migration from isolation: A Markov chain Monte Carlo approach. Genetics 158 (2001) 885-896
13. Rousset F. Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance. Genetics 145 (1997) 1219-1228
14. Slatkin M. Isolation by distance in equilibrium and non-equilibrium populations. Evolution Int. J. Org. Evolution 47 (1993) 264-279
15. Wright S. Evolution in Mendelian populations. Genetics 16 (1931) 97-159
16. Bohrer G., Nathan R., and Volis S. Effects of long-distance dispersal for metapopulation survival and genetic structure at ecological time and spatial scales. J. Ecol. 93 (2005) 1029-1040
17. Guillot G., Estoup A., Mortier F., and Cosso J.F. A spatial statistical model for landscape genetics. Genetics 170 (2005) 1261-1280
18. Guillot G., Mortier F., and Estoup A. GENELAND: A computer package for landscape genetics. Mol. Ecol. Notes 5 (2005) 712-715
19. Lurz P.W.W., Shirley M.D.F., Rushton S.P., and Sanderson R.A. Modelling the consequences of duck migration patterns on the genetic diversity of aquatic organisms: A first step towards a predictive tool for wetland management. Acta Oecologica 23 (2002) 205-212
20. Manel S., Schwartz M.K., Luikart G., and Taberlet P. Landscape genetics: Combining landscape ecology and population genetics. Trends Ecol. Evol. 18 (2003) 189-197
21. Baums I.B., Miller M.W., and Hellberg M.E. Regionally isolated populations of an imperiled Caribbean coral, Acropora palmata. Mol. Ecol. 14 (2005) 1377-1390
22. Brazeau D.A., Sammarco P.W., and Gleason D.F. A multi-locus genetic assignment technique to assess sources of Agaricia agaricites larvae on coral reefs. Mar. Biol. 147 (2005) 1141-1148
23. Fukami H., Budd A.F., Levitan D.R., Jara J., Kersanach R., and Knowlton N. Geographic differences in species boundaries among members of the Montastraea annularis complex based on molecular and morphological markers. Evolution Int. J. Org. Evolution 58 (2004) 324-337
24. Cowen R.K., Paris C.B., Olson D.B., and Fortuna J.L. The role of long distance dispersal versus local retention in replenishing marine populations. Gulf and Caribbean Research 14 (2003) 129-137
25. Olson D.B., Paris C.B., and Cowen R.K. Lagrangian biological models. Encyclopedia of Ocean Sciences (2001), Academic Press, New York pp. 1438-1443
26. Olson D.B. Lagrangian biophysical dynamics. In: Griffa A., Kirwan A.D., Mariano A.J., Ozgokmen T., and Rossby T. (Eds). Lagrangian Analysis and Prediction of Coastal and Ocean Dynamics (2006), Cambridge University Press, Cambridge, UK in press
27. Vollmer S.V., and Palumbi S.R. Hybridization and the evolution of reef coral diversity. Science 296 (2002) 2023-2025
28. Schneider S., Roessli D., and Excoffier L. A Software for Population Genetics Data Analysis (2000), Genetics and Biometry Laboratory, University of Geneva, Geneva, Switzerland
29. Colin P.L. Larvae retention: Genes or oceanography?. Science 300 (2003) 1657-1659
30. Clarke K.R. Non-parametric multivariate analyses of changes in community structure. Aust. J. Ecol. 18 (1993) 117-143
31. Pritchard J.K., Stephens M., and Donnelly P. Inference of population structure using multilocus genotype data. Genetics 155 (2000) 945-959
32. Botsford L.W., Micheli F., and Hastings A. Principles for the design of marine reserves. Ecol. Appl. 13 Suppl 1 (2003) S25-S31
33. Roberts C.M. Connectivity and management of Caribbean coral reefs. Science 278 (1997) 1454-1457
34. Sale P.F., Cowen R.K., Danilowicz B.S., Jones G.P., Kritzer J.P., Lindeman K.C., Planes S., Polunin N.V.C., Russ G.R., Sadovy Y.J., et al. Critical science gaps impede use of no-take fishery reserves. Trends Ecol. Evol. 20 (2005) 74-80
35. Sammarco P.W., Andrews J.C., and Risk M.J. Coral reef geomorphology as a function of seasonal prevailing currents and larval dispersal. Palaeogeogr. Palaeoclimatol. Palaeoecol. 88 (1991) 1-12
36. Bouchon-Navaro Y., Bouchon C., Louis M., and Legendre P. Biogeographic patterns of coastal fish assemblages in the West Indies. J. Exp. Mar. Biol. Ecol. 315 (2005) 31-47
37. Briggs J.C. Operation of zoogeographic barriers. Syst. Zool. 23 (1974) 248-256
38. Robins C.R. Distributional patterns of fishes from coastal and shelf waters of the tropical western Atlantic. FAO Fisheries Research 71 (1971) 249-255
39. Mitton J.B., Berg C.J., and Orr K.S. Population structure, larval dispersal and gene flow in the Queen Conch Strombus gigas of the Caribbean. Biol. Bull. 177 (1989) 356-362
40. Rocha R.M., Faria S.B., and Moreno T.R. Ascidians from Bocas del Toro, Panama. I. Biodiversity. Caribb. J. Sci. 41 (2005) 600-612
41. Shulman M.J., and Bermingham E. Early life histories, ocean currents, and the population genetics of Caribbean reef fishes. Evolution Int. J. Org. Evolution 49 (1995) 897-910
42. Silberman J.D., Sarver S.K., and Walsh P.J. Mitochondrial DNA variation and population structure in the spiny lobster Panulirus argus. Mar. Biol. 120 (1994) 601-608
43. Cowen R.K., Lwiza K.M.M., Sponaugle S., Paris C.B., and Olson D.B. Connectivity of marine populations: Open or closed?. Science 287 (2000) 857-859
44. Palumbi S.R., and Warner R.R. Why gobies are like hobbits. Science 299 (2003) 51-52
45. Jones G.P., Planes S., and Thorrold S.R. Coral reef fish larvae settle close to home. Curr. Biol. 15 (2005) 1314-1318
46. Thorrold S.R., Latkoczy C., Swart P.K., and Jones C.M. Natal homing in a marine fish metapopulation. Science 291 (2001) 297-299
47. Baums I.B., Paris C.B., and Cherubin L.M. A bio-oceanographic filter to larval dispersal in a reef-building coral. Limnol. Oceanogr. (2006) in press