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Volumn 91, Issue 4, 2006, Pages 1235-1247

Mathematical description of gene regulatory units

Author keywords

[No Author keywords available]

Indexed keywords

ARABINOSE; LACTOSE; TRYPTOPHAN;

EID: 33746821537     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1529/biophysj.106.081828     Document Type: Article
Times cited : (21)

References (40)
  • 1
    • 0036901602 scopus 로고    scopus 로고
    • Modeling transcriptional regulatory networks
    • Bolouri, H., and E. H. Davidson. 2002. Modeling transcriptional regulatory networks. Bioessays. 24:1118-1129.
    • (2002) Bioessays , vol.24 , pp. 1118-1129
    • Bolouri, H.1    Davidson, E.H.2
  • 2
    • 0035905782 scopus 로고    scopus 로고
    • Modelling cellular behavior
    • Endy, D., and R. Brent. 2001. Modelling cellular behavior. Nature. 409:391-395.
    • (2001) Nature , vol.409 , pp. 391-395
    • Endy, D.1    Brent, R.2
  • 3
    • 0842309879 scopus 로고    scopus 로고
    • Uses and abuses of mathematics in biology
    • May, R. M. 2004. Uses and abuses of mathematics in biology. Science. 303:790-793.
    • (2004) Science , vol.303 , pp. 790-793
    • May, R.M.1
  • 5
    • 0036500834 scopus 로고    scopus 로고
    • Reverse engineering of biological complexity
    • Csete, M. E., and J. C. Doyle. 2002. Reverse engineering of biological complexity. Science. 295:1664-1669.
    • (2002) Science , vol.295 , pp. 1664-1669
    • Csete, M.E.1    Doyle, J.C.2
  • 8
    • 15444380932 scopus 로고    scopus 로고
    • Understanding biology by reverse engineering the control
    • Tomlin, C. J., and J. D. Axelrod. 2005. Understanding biology by reverse engineering the control. Proc. Natl. Acad. Sci. USA. 102:4219-4220.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 4219-4220
    • Tomlin, C.J.1    Axelrod, J.D.2
  • 10
    • 0034712843 scopus 로고    scopus 로고
    • Robust perfect adaptation in bacterial chemotaxis through integral feedback control
    • Yi, T.-M., Y. Huang, M. I. Simon, and J. Doyle. 2000. Robust perfect adaptation in bacterial chemotaxis through integral feedback control. Proc. Natl. Acad. Sci. USA. 97:4649-4653.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 4649-4653
    • Yi, T.-M.1    Huang, Y.2    Simon, M.I.3    Doyle, J.4
  • 11
    • 0034625005 scopus 로고    scopus 로고
    • Cell signaling pathways as control modules: Complexity for simplicity?
    • Lauffenburger, D. A. 2000. Cell signaling pathways as control modules: complexity for simplicity? Proc. Natl. Acad. Sci. USA. 97:5031-5033.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 5031-5033
    • Lauffenburger, D.A.1
  • 12
    • 1642297213 scopus 로고    scopus 로고
    • Controller-regulator model of the central nervous system
    • Ito, M. 2002. Controller-regulator model of the central nervous system. J. Integr. Neurosci. 1:129-143.
    • (2002) J. Integr. Neurosci. , vol.1 , pp. 129-143
    • Ito, M.1
  • 14
    • 1842591130 scopus 로고    scopus 로고
    • The regulation of bacterial transcription initiation
    • Browning, D. F., and S. J. W. Busby. 2004. The regulation of bacterial transcription initiation. Nat. Rev. Microbiol. 2:57-65.
    • (2004) Nat. Rev. Microbiol. , vol.2 , pp. 57-65
    • Browning, D.F.1    Busby, S.J.W.2
  • 15
    • 0004230881 scopus 로고    scopus 로고
    • Walter de Bruyter & Company, Berlin, Germany
    • Müller-Hill, B. 1996. The lac Operon. Walter de Bruyter & Company, Berlin, Germany.
    • (1996) The Lac Operon
    • Müller-Hill, B.1
  • 16
    • 0030089476 scopus 로고    scopus 로고
    • Mechanism responsible for glucose-lactose diauxie in Escherichia coli: Challenge to the cAMP model
    • Inada, T., K. Kimata, and H. Aiba. 1996. Mechanism responsible for glucose-lactose diauxie in Escherichia coli: challenge to the cAMP model. Genes Cells. 1:293-301.
    • (1996) Genes Cells , vol.1 , pp. 293-301
    • Inada, T.1    Kimata, K.2    Aiba, H.3
  • 18
    • 0038298805 scopus 로고    scopus 로고
    • Feedback regulation in the lactose operon: A mathematical modeling study and comparison with experimental data
    • Yildirim, N., and M. C. Mackey. 2003. Feedback regulation in the lactose operon: a mathematical modeling study and comparison with experimental data. Biophys. J. 84:2841-2851.
    • (2003) Biophys. J. , vol.84 , pp. 2841-2851
    • Yildirim, N.1    Mackey, M.C.2
  • 20
    • 1442354192 scopus 로고    scopus 로고
    • Multistability in the lactose utilization network of Escherichia coli
    • Ozbudak, E. M., M. Thattai, H. N. Lim, B. I. Shraiman, and A. van Oudenaarden. 2004. Multistability in the lactose utilization network of Escherichia coli. Nature. 427:737-740.
    • (2004) Nature , vol.427 , pp. 737-740
    • Ozbudak, E.M.1    Thattai, M.2    Lim, H.N.3    Shraiman, B.I.4    Van Oudenaarden, A.5
  • 21
    • 1542335822 scopus 로고    scopus 로고
    • Influence of catabolite repression and inducer exclusion on the bistable behavior of the lac operon
    • Santillán, M., and M. C. Mackey. 2004. Influence of catabolite repression and inducer exclusion on the bistable behavior of the lac operon. Biophys. J. 86:1282-1292.
    • (2004) Biophys. J. , vol.86 , pp. 1282-1292
    • Santillán, M.1    Mackey, M.C.2
  • 22
    • 27844574799 scopus 로고    scopus 로고
    • Motifs, control, and stability
    • Doyle, J., and M. Csete. 2005. Motifs, control, and stability. PLoS Biol. 3:e392.
    • (2005) PLoS Biol. , vol.3
    • Doyle, J.1    Csete, M.2
  • 23
    • 0035578429 scopus 로고    scopus 로고
    • Design principles for elementary gene circuits: Elements, methods, and examples
    • Savageau, M. A. 2001. Design principles for elementary gene circuits: elements, methods, and examples. Chaos. 11:142-159.
    • (2001) Chaos , vol.11 , pp. 142-159
    • Savageau, M.A.1
  • 24
    • 0000500254 scopus 로고    scopus 로고
    • Regulation beyond the operon
    • F.C. Neidhardt, editor-in-chief. ASM Press, Washington, DC
    • Neidhardt, F. C., and M. A. Savageau. 1996. Regulation beyond the operon. In Escherichia coli and Salmonella, 2nd Ed. F.C. Neidhardt, editor-in-chief. ASM Press, Washington, DC.
    • (1996) Escherichia Coli and Salmonella, 2nd Ed.
    • Neidhardt, F.C.1    Savageau, M.A.2
  • 25
    • 0034564982 scopus 로고    scopus 로고
    • Regulation of the L-arabinose operon of Escherichia coli
    • Schleif, R. 2000. Regulation of the L-arabinose operon of Escherichia coli. Trends Genet. 16:559-565.
    • (2000) Trends Genet. , vol.16 , pp. 559-565
    • Schleif, R.1
  • 26
    • 0037500231 scopus 로고    scopus 로고
    • Using studies on tryptophan metabolism to answer basic biological questions
    • Yanofsky, C. 2003. Using studies on tryptophan metabolism to answer basic biological questions. J. Biol. Chem. 28:10859-10878.
    • (2003) J. Biol. Chem. , vol.28 , pp. 10859-10878
    • Yanofsky, C.1
  • 27
    • 0024278213 scopus 로고
    • Theoretical study of tryptophan operon: Application in microbial technology
    • Sinha, S. 1988. Theoretical study of tryptophan operon: application in microbial technology. Biotechnol. Bioeng. 31:117-124.
    • (1988) Biotechnol. Bioeng. , vol.31 , pp. 117-124
    • Sinha, S.1
  • 28
    • 0019974626 scopus 로고
    • Role of feedback inhibition in stabilizing the classical operon
    • Bliss, R. D., R. P. Painter, and A. G. Marr. 1982. Role of feedback inhibition in stabilizing the classical operon. J. Theor. Biol. 97:177-193.
    • (1982) J. Theor. Biol. , vol.97 , pp. 177-193
    • Bliss, R.D.1    Painter, R.P.2    Marr, A.G.3
  • 29
    • 4544334943 scopus 로고    scopus 로고
    • Dynamic influence of feedback enzyme inhibition and transcription attenuation on the tryptophan operon response to nutritional shifts
    • Santillán, M., and E. S. Zeron. 2004. Dynamic influence of feedback enzyme inhibition and transcription attenuation on the tryptophan operon response to nutritional shifts. J. Theor. Biol. 231:287-298.
    • (2004) J. Theor. Biol. , vol.231 , pp. 287-298
    • Santillán, M.1    Zeron, E.S.2
  • 30
    • 0021776417 scopus 로고
    • The heat shock response
    • Craig, E. A. 1985. The heat shock response. CRC Crit. Rev. Biochem. 18:239-280.
    • (1985) CRC Crit. Rev. Biochem. , vol.18 , pp. 239-280
    • Craig, E.A.1
  • 31
    • 0001420875 scopus 로고
    • Lysogeny
    • Lwoff, A. 1953. Lysogeny. Bacter. Rev. 17:269-337.
    • (1953) Bacter. Rev. , vol.17 , pp. 269-337
    • Lwoff, A.1
  • 33
    • 0004194541 scopus 로고
    • Cell & Blackwell Scientific, Cambridge, MA
    • Ptashne, M. 1992. A Genetic Switch. Cell & Blackwell Scientific, Cambridge, MA.
    • (1992) A Genetic Switch
    • Ptashne, M.1
  • 34
    • 0031879114 scopus 로고    scopus 로고
    • Stochastic kinetic analysis of developmental pathway bifurcation in phage λ-infected Escherichia coli cells
    • Arkin, A., J. Ross, and H. H. McAdams. 1998. Stochastic kinetic analysis of developmental pathway bifurcation in phage λ-infected Escherichia coli cells. Genetics. 149:1633-1648.
    • (1998) Genetics , vol.149 , pp. 1633-1648
    • Arkin, A.1    Ross, J.2    McAdams, H.H.3
  • 35
    • 0029028963 scopus 로고
    • Circuit simulation of genetic networks
    • McAdams, H. H., and L. Shapiro. 1995. Circuit simulation of genetic networks. Science. 269:650-656.
    • (1995) Science , vol.269 , pp. 650-656
    • McAdams, H.H.1    Shapiro, L.2
  • 36
    • 0025122786 scopus 로고
    • Theoretical and experimental analysis of the phage-λ genetic switch missing levels of co-operativity
    • Reinitz, J., and J. R. Vaisnys. 1990. Theoretical and experimental analysis of the phage-λ genetic switch missing levels of co-operativity. J. Theor. Biol. 145:295-318.
    • (1990) J. Theor. Biol. , vol.145 , pp. 295-318
    • Reinitz, J.1    Vaisnys, J.R.2
  • 37
    • 0346688719 scopus 로고    scopus 로고
    • Why the lysogenic state of phage λ is so stable: A mathematical modeling approach
    • Santillán, M., and M. C. Mackey. 2004. Why the lysogenic state of phage λ is so stable: a mathematical modeling approach. Biophys. J. 86:75-84.
    • (2004) Biophys. J. , vol.86 , pp. 75-84
    • Santillán, M.1    Mackey, M.C.2
  • 38
    • 0001422329 scopus 로고
    • Quantitative model for gene regulation by λ-phage repressor
    • Ackers, G. K., A. D. Johnson, and M. A. Sea. 1982. Quantitative model for gene regulation by λ-phage repressor. Proc. Natl. Acad. Sci. USA. 79:1129-1133.
    • (1982) Proc. Natl. Acad. Sci. USA , vol.79 , pp. 1129-1133
    • Ackers, G.K.1    Johnson, A.D.2    Sea, M.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.