-
1
-
-
54249116230
-
Genetic regulatory mechanisms in the synthesis of proteins
-
F. Jacob and J. Monod, " Genetic regulatory mechanisms in the synthesis of proteins, " J. Mol. Biol. 3, 318-356 (1961).
-
(1961)
J. Mol. Biol.
, vol.3
, pp. 318-356
-
-
Jacob, F.1
Monod, J.2
-
3
-
-
0002539674
-
Are there rules governing patterns of gene regulation?
-
in edited by B. C. Goodwin and P. T. Saunders (Edinburgh University Press, Edinburgh,)
-
M. A. Savageau, "Are there rules governing patterns of gene regulation?" in Theoretical Biology - Epigenetic and Evolutionary Order, edited by B. C. Goodwin and P. T. Saunders (Edinburgh University Press, Edinburgh, 1989), pp. 42-66.
-
(1989)
Theoretical Biology - Epigenetic and Evolutionary Order
, pp. 42-66
-
-
Savageau, M.A.1
-
5
-
-
0039269170
-
Inhomogeneous Kauffman models at the borderline between order and chaos
-
K. E. Kürten and H. Beer, " Inhomogeneous Kauffman models at the borderline between order and chaos, " J. Stat. Phys. 87, 929-935 (1997).
-
(1997)
J. Stat. Phys.
, vol.87
, pp. 929-935
-
-
Kürten, K.E.1
Beer, H.2
-
6
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
F. R. Blattner, G. Plunkett III, C. A. Bloch, N. T. Perna, V. Burland, M. Riley, J. Collado-Vides, J. D. Glasner, C. K. Rode, G. F. Mayhew, J. Gregor, N. W. Davis, H. A. Kirkpatrick, M. A. Goeden, D. J. Rose, B. Mau, and Y. Shao, " The complete genome sequence of Escherichia coli K-12, " Science 277, 1453-1462 (1997).
-
(1997)
Science
, vol.277
, pp. 1453-1462
-
-
Blattner, F.R.1
Plunkett III, G.2
Bloch, C.A.3
Perna, N.T.4
Burland, V.5
Riley, M.6
Collado-Vides, J.7
Glasner, J.D.8
Rode, C.K.9
Mayhew, G.F.10
Gregor, J.11
Davis, N.W.12
Kirkpatrick, H.A.13
Goeden, M.A.14
Rose, D.J.15
Mau, B.16
Shao, Y.17
-
7
-
-
0031827572
-
Prediction of transcriptional regulatory sites in the complete genome sequence of Escherichia coli K-12
-
D. Thieffry, H. Salgado, A. M. Huerta, and J. Collado-Vides, " Prediction of transcriptional regulatory sites in the complete genome sequence of Escherichia coli K-12, " Bioinformatics 14, 391-400 (1998).
-
(1998)
Bioinformatics
, vol.14
, pp. 391-400
-
-
Thieffry, D.1
Salgado, H.2
Huerta, A.M.3
Collado-Vides, J.4
-
8
-
-
0004219679
-
-
Eds. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
J. R. Beckwith and E. Zipser, Eds., The Lactose Operon (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 1970).
-
(1970)
The Lactose Operon
-
-
Beckwith, J.R.1
Zipser, E.2
-
9
-
-
0032549745
-
Genomic cis-regulatory logic: Experimental and computational analysis of a sea urchin gene
-
C. H. Yuh, H. Bolouri, and E. H. Davidson, " Genomic cis-regulatory logic: Experimental and computational analysis of a sea urchin gene, " Science 279, 1896-1902 (1998).
-
(1998)
Science
, vol.279
, pp. 1896-1902
-
-
Yuh, C.H.1
Bolouri, H.2
Davidson, E.H.3
-
10
-
-
0029033413
-
Subunit structure of regulator proteins influences the design of gene circuitry: Analysis of perfectly coupled and completely uncoupled circuits
-
W. S. Hlavacek and M. A. Savageau, " Subunit structure of regulator proteins influences the design of gene circuitry: Analysis of perfectly coupled and completely uncoupled circuits, " J. Mol. Biol. 248, 739-755 (1995).
-
(1995)
J. Mol. Biol.
, vol.248
, pp. 739-755
-
-
Hlavacek, W.S.1
Savageau, M.A.2
-
11
-
-
0030002954
-
Rules for coupled expression of regulator and effector genes in inducible circuits
-
W. S. Hlavacek and M. A. Savageau, " Rules for coupled expression of regulator and effector genes in inducible circuits, " J. Mol. Biol. 255, 121-139 (1996).
-
(1996)
J. Mol. Biol.
, vol.255
, pp. 121-139
-
-
Hlavacek, W.S.1
Savageau, M.A.2
-
12
-
-
0000500254
-
Regulation beyond the operon
-
in edited by F. C. Neidhardt et al. (ASM, Washington, DC,)
-
F. C. Neidhardt and M. A. Savageau, "Regulation beyond the operon," in Escherichia coli and Salmonella: Cellular and Molecular Biology, edited by F. C. Neidhardt et al. (ASM, Washington, DC, 1996), pp. 1310-1324.
-
(1996)
Escherichia Coli and Salmonella: Cellular and Molecular Biology
, pp. 1310-1324
-
-
Neidhardt, F.C.1
Savageau, M.A.2
-
13
-
-
0031879114
-
Stochastic kinetic analysis of developmental pathway bifurcation in phage λ-infected Escherichia coli cells
-
A. Arkin, J. Ross, and H. H. McAdams, " Stochastic kinetic analysis of developmental pathway bifurcation in phage λ-infected Escherichia coli cells, " Genetics 149, 1633-1648 (1998).
-
(1998)
Genetics
, vol.149
, pp. 1633-1648
-
-
Arkin, A.1
Ross, J.2
McAdams, H.H.3
-
14
-
-
0014658880
-
Biochemical systems analysis II. the steady state solutions for an n-pool system using a power-law approximation
-
M. A. Savageau, " Biochemical systems analysis II. The steady state solutions for an n-pool system using a power-law approximation, " J. Theor. Biol. 25, 370-379 (1969).
-
(1969)
J. Theor. Biol.
, vol.25
, pp. 370-379
-
-
Savageau, M.A.1
-
15
-
-
0001068695
-
Power-law formalism: A canonical nonlinear approach to modeling and analysis
-
in edited by V. Lakshmikantham (de Gruyter, Berlin,)
-
M. A. Savageau, "Power-law formalism: A canonical nonlinear approach to modeling and analysis," in World Congress of Nonlinear Analysts 92, edited by V. Lakshmikantham (de Gruyter, Berlin, 1996), Vol. 4, pp. 3323-3334.
-
(1996)
World Congress of Nonlinear Analysts 92
, vol.4
, pp. 3323-3334
-
-
Savageau, M.A.1
-
16
-
-
0342349799
-
Recasting nonlinear differential equations as S-systems: A canonical nonlinear form
-
M. A. Savageau and E. O. Voit, " Recasting nonlinear differential equations as S-systems: A canonical nonlinear form, " Math. Biosci. 87, 83-115 (1987).
-
(1987)
Math. Biosci.
, vol.87
, pp. 83-115
-
-
Savageau, M.A.1
Voit, E.O.2
-
17
-
-
0034101725
-
Synergism analysis of biochemical systems. I. Conceptual framework
-
A. Salvador, " Synergism analysis of biochemical systems. I. Conceptual framework, " Math. Biosci. 163, 105-129 (2000).
-
(2000)
Math. Biosci.
, vol.163
, pp. 105-129
-
-
Salvador, A.1
-
18
-
-
0034092624
-
Synergism analysis of biochemical systems. II. Deviations from multiplicativity
-
A. Salvador, " Synergism analysis of biochemical systems. II. Deviations from multiplicativity, " Math. Biosci. 163, 131-158 (2000).
-
(2000)
Math. Biosci.
, vol.163
, pp. 131-158
-
-
Salvador, A.1
-
19
-
-
0023661067
-
Accuracy of alternative representations for integrated biochemical systems
-
E. O. Voit and M. A. Savageau, " Accuracy of alternative representations for integrated biochemical systems, " Biochemistry 26, 6869-6880 (1987).
-
(1987)
Biochemistry
, vol.26
, pp. 6869-6880
-
-
Voit, E.O.1
Savageau, M.A.2
-
20
-
-
0024673591
-
Strategies for representing metabolic pathways within biochemical systems theory: Reversible pathways
-
A. Sorribas and M. A. Savageau, " Strategies for representing metabolic pathways within biochemical systems theory: Reversible pathways, " Math. Biosci. 94, 239-269 (1989).
-
(1989)
Math. Biosci.
, vol.94
, pp. 239-269
-
-
Sorribas, A.1
Savageau, M.A.2
-
21
-
-
0035221090
-
Development of a system for the inference of large scale genetic networks
-
Y. Maki, D. Tominaga, M. Okamoto, W. Watanabe, and Y. Eguchi, " Development of a system for the inference of large scale genetic networks, " Pacific Symposium on Biocomputing 6, 446-458 (2000).
-
(2000)
Pacific Symposium on Biocomputing
, vol.6
, pp. 446-458
-
-
Maki, Y.1
Tominaga, D.2
Okamoto, M.3
Watanabe, W.4
Eguchi, Y.5
-
22
-
-
0010915160
-
Growth of complex systems can be related to the properties of their underlying determinants
-
M. A. Savageau, " Growth of complex systems can be related to the properties of their underlying determinants, " Proc. Natl. Acad. Sci. U.S.A. 76, 5413-5417 (1979).
-
(1979)
Proc. Natl. Acad. Sci. U.S.A.
, vol.76
, pp. 5413-5417
-
-
Savageau, M.A.1
-
29
-
-
0030569904
-
Optimization of nonlinear biotechnological processes with linear programming. Application to citric acid production in Aspergillus niger
-
N. V. Torres, E. O. Voit, and C. H. González-Alcón, " Optimization of nonlinear biotechnological processes with linear programming. Application to citric acid production in Aspergillus niger, " Biotechnol. Bioeng. 49, 247-258 (1996).
-
(1996)
Biotechnol. Bioeng.
, vol.49
, pp. 247-258
-
-
Torres, N.V.1
Voit, E.O.2
González-Alcón, C.H.3
-
30
-
-
0029902666
-
Model assessment and refinement using strategies from biochemical systems theory: Application to metabolism in human red blood cells
-
T.-C. Ni and M. A. Savageau, " Model assessment and refinement using strategies from biochemical systems theory: Application to metabolism in human red blood cells, " J. Theor. Biol. 179, 329-368 (1996).
-
(1996)
J. Theor. Biol.
, vol.179
, pp. 329-368
-
-
Ni, T.-C.1
Savageau, M.A.2
-
31
-
-
0001232028
-
A qualitative analysis of S-systems: Hopf bifurcations
-
in edited by E. O. Voit (Van Nostrand Reinhold, New York,)
-
D. C. Lewis, "A qualitative analysis of S-systems: Hopf bifurcations," in Canonical Nonlinear Modeling. S-System Approach to Understanding Complexity, edited by E. O. Voit (Van Nostrand Reinhold, New York, 1991), pp. 304-344.
-
(1991)
Canonical Nonlinear Modeling. S-System Approach to Understanding Complexity
, pp. 304-344
-
-
Lewis, D.C.1
-
32
-
-
0025445207
-
Efficient solution of nonlinear ordinary differential equations expressed in S-system canonical form
-
D. H. Irvine and M. A. Savageau, " Efficient solution of nonlinear ordinary differential equations expressed in S-system canonical form, " SIAM (Soc. Ind. Appl. Math.) J. Numer. Anal. 27, 704-735 (1990).
-
(1990)
SIAM (Soc. Ind. Appl. Math.) J. Numer. Anal.
, vol.27
, pp. 704-735
-
-
Irvine, D.H.1
Savageau, M.A.2
-
33
-
-
0026153412
-
A monomial-based method for solving systems of non-linear algebraic equations
-
S. A. Burns and A. Locascio, " A monomial-based method for solving systems of non-linear algebraic equations, " Int. J. Numer. Methods Eng. 31, 1295-1318 (1991).
-
(1991)
Int. J. Numer. Methods Eng.
, vol.31
, pp. 1295-1318
-
-
Burns, S.A.1
Locascio, A.2
-
34
-
-
0001591382
-
Finding multiple roots of nonlinear algebraic equations using S-system methodology
-
M. A. Savageau, " Finding multiple roots of nonlinear algebraic equations using S-system methodology, " Appl. Math. Comput. 55, 187-199 (1993).
-
(1993)
Appl. Math. Comput.
, vol.55
, pp. 187-199
-
-
Savageau, M.A.1
-
35
-
-
85012694370
-
The behavior of intact biochemical control systems
-
M. A. Savageau, " The behavior of intact biochemical control systems, " Curr. Top. Cell. Regul. 6, 63-130 (1972).
-
(1972)
Curr. Top. Cell. Regul.
, vol.6
, pp. 63-130
-
-
Savageau, M.A.1
-
36
-
-
0021776306
-
A theory of alternative designs for biochemical control systems
-
M. A. Savageau, " A theory of alternative designs for biochemical control systems, " Biomed. Biochim. Acta 44, 875-880 (1985).
-
(1985)
Biomed. Biochim. Acta
, vol.44
, pp. 875-880
-
-
Savageau, M.A.1
-
37
-
-
0033665572
-
Extending the method of mathematically controlled comparison to include numerical comparisons
-
R. Alves and M. A. Savageau, " Extending the method of mathematically controlled comparison to include numerical comparisons, " Bioinformatics 16, 786-798 (2000).
-
(2000)
Bioinformatics
, vol.16
, pp. 786-798
-
-
Alves, R.1
Savageau, M.A.2
-
38
-
-
0017635932
-
Design of molecular control mechanisms and the demand for gene expression
-
M. A. Savageau, " Design of molecular control mechanisms and the demand for gene expression, " Proc. Natl. Acad. Sci. U.S.A. 74, 5647-5651 (1977).
-
(1977)
Proc. Natl. Acad. Sci. U.S.A.
, vol.74
, pp. 5647-5651
-
-
Savageau, M.A.1
-
39
-
-
3543037854
-
Models of gene function: General methods of kinetic analysis and specific ecological correlates
-
in edited by H. W. Blanch, E. T. Papoutsakis, and G. N. Stephanopoulos (American Chemical Society, Washington, DC,)
-
M. A. Savageau, "Models of gene function: general methods of kinetic analysis and specific ecological correlates," in Foundations of Biochemical Engineering: Kinetics and Thermodynamics in Biological Systems, edited by H. W. Blanch, E. T. Papoutsakis, and G. N. Stephanopoulos (American Chemical Society, Washington, DC, 1983), pp. 3-25.
-
(1983)
Foundations of Biochemical Engineering: Kinetics and Thermodynamics in Biological Systems
, pp. 3-25
-
-
Savageau, M.A.1
-
40
-
-
0020549467
-
Regulation of differentiated cell-specific functions
-
M. A. Savageau, " Regulation of differentiated cell-specific functions, " Proc. Natl. Acad. Sci. U.S.A. 80, 1411-1415 (1983).
-
(1983)
Proc. Natl. Acad. Sci. U.S.A.
, vol.80
, pp. 1411-1415
-
-
Savageau, M.A.1
-
42
-
-
84995356971
-
Enzyme induction as an all-or-none phenomenon
-
A. Novick and M. Weiner, " Enzyme induction as an all-or-none phenomenon, " Proc. Natl. Acad. Sci. U.S.A. 43, 553-566 (1957).
-
(1957)
Proc. Natl. Acad. Sci. U.S.A.
, vol.43
, pp. 553-566
-
-
Novick, A.1
Weiner, M.2
-
43
-
-
0002790076
-
The properties of repressor and the kinetics of its action
-
J. R. Sadler and A. Novick, " The properties of repressor and the kinetics of its action, " J. Mol. Biol. 12, 305-327 (1965).
-
(1965)
J. Mol. Biol.
, vol.12
, pp. 305-327
-
-
Sadler, J.R.1
Novick, A.2
-
45
-
-
0031904590
-
Demand theory of gene regulation: Quantitative development of the theory
-
M. A. Savageau, " Demand theory of gene regulation: Quantitative development of the theory, " Genetics 149, 1665-1676 (1998).
-
(1998)
Genetics
, vol.149
, pp. 1665-1676
-
-
Savageau, M.A.1
-
46
-
-
0031927611
-
Demand theory of gene regulation: Quantitative application to the lactose and maltose operons of Escherichia coli
-
M. A. Savageau, " Demand theory of gene regulation: Quantitative application to the lactose and maltose operons of Escherichia coli, " Genetics 149, 1677-1691 (1998).
-
(1998)
Genetics
, vol.149
, pp. 1677-1691
-
-
Savageau, M.A.1
-
47
-
-
0017118934
-
Quantitative measurement of lactose absorption
-
J. H. Bond and M. D. Levitt, " Quantitative measurement of lactose absorption, " Gastroenterology 70, 1058-1062 (1976).
-
(1976)
Gastroenterology
, vol.70
, pp. 1058-1062
-
-
Bond, J.H.1
Levitt, M.D.2
-
48
-
-
0021682974
-
Intestinal transit of solid and liquid components of a meal in health
-
J.-R. Malagelada, J. S. Robertson, M. L. Brown, M. Remington, J. A. Duenes, G. M. Thomforde, and P. W. Carryer, " Intestinal transit of solid and liquid components of a meal in health, " Gastroenterology 87, 1255-1263 (1984).
-
(1984)
Gastroenterology
, vol.87
, pp. 1255-1263
-
-
Malagelada, J.-R.1
Robertson, J.S.2
Brown, M.L.3
Remington, M.4
Duenes, J.A.5
Thomforde, G.M.6
Carryer, P.W.7
-
49
-
-
0017232399
-
Transit through the gut measured by analysis of a single stool
-
J. H. Cummings and H. S. Wiggins, " Transit through the gut measured by analysis of a single stool, " Gut 17, 219-223 (1976).
-
(1976)
Gut
, vol.17
, pp. 219-223
-
-
Cummings, J.H.1
Wiggins, H.S.2
-
50
-
-
0019379901
-
Fiber and bowel transit times
-
J. S. S. Gear, A. J. M. Brodribb, A. Ware, and J. T. Mann, " Fiber and bowel transit times, " Br. J. Nutr. 45, 77-82 (1980).
-
(1980)
Br. J. Nutr.
, vol.45
, pp. 77-82
-
-
Gear, J.S.S.1
Brodribb, A.J.M.2
Ware, A.3
Mann, J.T.4
-
51
-
-
0020891851
-
Escherichia coli habitats, cell types, and molecular mechanisms of gene control
-
M. A. Savageau, " Escherichia coli habitats, cell types, and molecular mechanisms of gene control, " Am. Nat. 122, 732-744 (1983).
-
(1983)
Am. Nat.
, vol.122
, pp. 732-744
-
-
Savageau, M.A.1
-
52
-
-
0002157835
-
The cellular basis for biological aging
-
in edited by C. E. Finch and L. Hayflick (Van Nostrand Reinhold, New York,)
-
L. Hayflick, "The cellular basis for biological aging," in Handbook of the Biology of Aging, edited by C. E. Finch and L. Hayflick (Van Nostrand Reinhold, New York, 1977), pp. 159-186.
-
(1977)
Handbook of the Biology of Aging
, pp. 159-186
-
-
Hayflick, L.1
-
53
-
-
76549258832
-
Persistence of individual strains of E. coli in the intestinal tract of man
-
H. I. Sears, I. Brownlee, and J. K. Uchiyama, " Persistence of individual strains of E. coli in the intestinal tract of man, " J. Bacteriol. 59, 293-301 (1950).
-
(1950)
J. Bacteriol.
, vol.59
, pp. 293-301
-
-
Sears, H.I.1
Brownlee, I.2
Uchiyama, J.K.3
-
54
-
-
0002878207
-
Further observations on the persistence of individual strains of Escherichia coli in the intestinal tract of man
-
H. I. Sears and I. Brownlee, " Further observations on the persistence of individual strains of Escherichia coli in the intestinal tract of man, " J. Bacteriol. 63, 47-57 (1952).
-
(1952)
J. Bacteriol.
, vol.63
, pp. 47-57
-
-
Sears, H.I.1
Brownlee, I.2
-
55
-
-
0019593643
-
Genetic diversity and temporal variation in the E. coli population of a human host
-
D. A. Caugant, B. R. Levin, and R. K. Selander, " Genetic diversity and temporal variation in the E. coli population of a human host, " Genetics 98, 467-490 (1981).
-
(1981)
Genetics
, vol.98
, pp. 467-490
-
-
Caugant, D.A.1
Levin, B.R.2
Selander, R.K.3
-
56
-
-
22244465548
-
Activation of transcription in Escherichia coli: The cyclic AMP receptor protein
-
in edited by R. C. Conaway and J. W. Conaway (Raven, New York,)
-
S. Garges, "Activation of transcription in Escherichia coli: The cyclic AMP receptor protein," in Transcription: Mechanisms and Regulation, edited by R. C. Conaway and J. W. Conaway (Raven, New York, 1994), pp. 343-352.
-
(1994)
Transcription: Mechanisms and Regulation
, pp. 343-352
-
-
Garges, S.1
|