메뉴 건너뛰기




Volumn 1, Issue 3, 2006, Pages 263-269

Postglacial population expansion of Dacrydium pectinatum (Podocarpaceae) in Hainan, southern China, based on cpDNA trnL-F nocoding sequence data

Author keywords

cpDNA trnL F noncoding sequence; Dacrydium pectinatum de Laubenfels; Genetic differentiation; Haplotype; Population expansion

Indexed keywords

DACRYDIUM PECTINATUM; PODOCARPACEAE;

EID: 33746817425     PISSN: 16733509     EISSN: 16733622     Source Type: Journal    
DOI: 10.1007/s11515-006-0032-9     Document Type: Article
Times cited : (2)

References (46)
  • 2
    • 0030056912 scopus 로고    scopus 로고
    • The impact of population expansion and mutation rate heterogeneity on DNA sequence polymorphism
    • Aris-Brosou S. and Excoffier L., The impact of population expansion and mutation rate heterogeneity on DNA sequence polymorphism. Mol. Biol. Evol., 1996, 13: 494-504
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 494-504
    • Aris-Brosou, S.1    Excoffier, L.2
  • 3
    • 0004187047 scopus 로고    scopus 로고
    • Cambridge: Harvard Universtiy Press
    • Avise, J. C., Phylogeography. Cambridge: Harvard Universtiy Press, 2000
    • (2000) Phylogeography
    • Avise, J.C.1
  • 5
    • 0038378986 scopus 로고    scopus 로고
    • Phylogeography of maritime pine inferred with organelle markers having contrasted inheritance
    • Burban C. and Petit R. J., Phylogeography of maritime pine inferred with organelle markers having contrasted inheritance. Mol. Ecol., 2003, 12: 1487-1495
    • (2003) Mol. Ecol. , vol.12 , pp. 1487-1495
    • Burban, C.1    Petit, R.J.2
  • 6
    • 84966175579 scopus 로고
    • Detection of genetic variation between and within populations of Gliricidia sepium and G. maculata using RAPD markers
    • Chalmers K. J., Waugh R., Sprent J. I., Simons A. J., Powell W., Detection of genetic variation between and within populations of Gliricidia sepium and G. maculata using RAPD markers. Heredity, 1992, 69: 465-472
    • (1992) Heredity , vol.69 , pp. 465-472
    • Chalmers, K.J.1    Waugh, R.2    Sprent, J.I.3    Simons, A.J.4    Powell, W.5
  • 7
    • 0029141142 scopus 로고
    • Diversity and genetic differentiation among subpopulations of Gliricidia sepium revealed by PCR-based assays
    • Dawson I. K., Simons A. J., Waugh R., Powell W., Diversity and genetic differentiation among subpopulations of Gliricidia sepium revealed by PCR-based assays. Heredity, 1995, 74: 10-18
    • (1995) Heredity , vol.74 , pp. 10-18
    • Dawson, I.K.1    Simons, A.J.2    Waugh, R.3    Powell, W.4
  • 8
    • 0034143556 scopus 로고    scopus 로고
    • The linkage disequilibrium between chloroplast DNA and mitochondrial DNA haplotypes in Beta vulgaris ssp. maritima (L.): The usefulness of both genomes for population genetic studies
    • Despanque B., Viard F., Bernard J., Forcioli D., Saumitou-Laprade P., Cuguen J., Van Dijk H., The linkage disequilibrium between chloroplast DNA and mitochondrial DNA haplotypes in Beta vulgaris ssp. maritima (L.): the usefulness of both genomes for population genetic studies. Mol. Ecol., 2000, 9: 141-154
    • (2000) Mol. Ecol. , vol.9 , pp. 141-154
    • Despanque, B.1    Viard, F.2    Bernard, J.3    Forcioli, D.4    Saumitou-Laprade, P.5    Cuguen, J.6    Van Dijk, H.7
  • 10
    • 0029557294 scopus 로고
    • Using chloroplast DNA to trace postglacial migration routes of oaks into Britain
    • Ferris C., Oliver R. P., Davy A. J., Hewitt G. M., Using chloroplast DNA to trace postglacial migration routes of oaks into Britain. Mol. Ecol., 1995, 4: 731-738
    • (1995) Mol. Ecol. , vol.4 , pp. 731-738
    • Ferris, C.1    Oliver, R.P.2    Davy, A.J.3    Hewitt, G.M.4
  • 11
    • 0042915149 scopus 로고    scopus 로고
    • Podocarpaceae
    • Wu Z. and Raven P. H. (eds.), Beijing: Science Press, St. Louis: Missouri Botanical Garden Press
    • Fu L. G., Li Y., Mill R. R., Podocarpaceae. In: Wu Z. and Raven P. H. (eds.), Flora of China Vol. 4 (Cycadaceae through Fagaceae). Beijing: Science Press, St. Louis: Missouri Botanical Garden Press, 1999, 78-86
    • (1999) Flora of China Vol. 4 (Cycadaceae Through Fagaceae) , vol.4 , pp. 78-86
    • Fu, L.G.1    Li, Y.2    Mill, R.R.3
  • 12
    • 0031453211 scopus 로고    scopus 로고
    • Genetic variation in Costa Rican populations of the tropical timber tree Cedrela odorata L. (Spanish cedar), assessed using RAPDs
    • Gillies A. C. M., Cornelius J. P., Newton A. C., Navarro C., Hemández M., Wilson J., Genetic variation in Costa Rican populations of the tropical timber tree Cedrela odorata L. (Spanish cedar), assessed using RAPDs. Mol. Ecol., 1997, 6: 1133-1145
    • (1997) Mol. Ecol. , vol.6 , pp. 1133-1145
    • Gillies, A.C.M.1    Cornelius, J.P.2    Newton, A.C.3    Navarro, C.4    Hemández, M.5    Wilson, J.6
  • 13
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall T. A., BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series, 1999, 41: 95-98
    • (1999) Nucleic Acids Symposium Series , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 14
    • 33749222363 scopus 로고
    • Factors influencing levels of genetic diversity in woody plant species
    • Hamrick J. L., Godt M. J. W., Sherman-Broyles S. L., Factors influencing levels of genetic diversity in woody plant species. New Forests, 1992, 6: 95-124
    • (1992) New Forests , vol.6 , pp. 95-124
    • Hamrick, J.L.1    Godt, M.J.W.2    Sherman-Broyles, S.L.3
  • 15
    • 0036845220 scopus 로고    scopus 로고
    • Spatial pattern of chloroplast DNA variation of Cyclobalanopsis glauca in Taiwan and East Asia
    • Huang S. S., Hwang S. Y., Lin T. P., Spatial pattern of chloroplast DNA variation of Cyclobalanopsis glauca in Taiwan and East Asia. Mol. Ecol., 2002, 11: 2349-2358
    • (2002) Mol. Ecol. , vol.11 , pp. 2349-2358
    • Huang, S.S.1    Hwang, S.Y.2    Lin, T.P.3
  • 16
    • 0022211482 scopus 로고
    • Statistical properties of the number of recombination events in the history of a sample of DNA sequences
    • Hudson R. R. and Kaplan N. L., Statistical properties of the number of recombination events in the history of a sample of DNA sequences. Genetics, 1985, 111: 147-164
    • (1985) Genetics , vol.111 , pp. 147-164
    • Hudson, R.R.1    Kaplan, N.L.2
  • 17
    • 0036362167 scopus 로고    scopus 로고
    • Mitochondrial phylogeography of moose (Alces alces): Late Pleistocene divergence and population expansion
    • Hundertmark K. J., Shields G. F., Udina I. G., Bowyer R. T., Danilkin A. A., Schwartz C. C., Mitochondrial phylogeography of moose (Alces alces): late Pleistocene divergence and population expansion., Mol. Phyl. Evol., 2002, 22: 375-387
    • (2002) Mol. Phyl. Evol. , vol.22 , pp. 375-387
    • Hundertmark, K.J.1    Shields, G.F.2    Udina, I.G.3    Bowyer, R.T.4    Danilkin, A.A.5    Schwartz, C.C.6
  • 18
    • 0141613140 scopus 로고    scopus 로고
    • Postglacial population growth of Cunninghamia konishii (Cupressaceae) inferred from phylogeographical and mismatch analysis of cloroplast DNA variation
    • Hwang S. Y., Lin T. P., Ma C. S., Lin C. L., Chung J. D., Yang J. C., Postglacial population growth of Cunninghamia konishii (Cupressaceae) inferred from phylogeographical and mismatch analysis of cloroplast DNA variation. Mol. Ecol., 2003, 12: 2689-2695
    • (2003) Mol. Ecol. , vol.12 , pp. 2689-2695
    • Hwang, S.Y.1    Lin, T.P.2    Ma, C.S.3    Lin, C.L.4    Chung, J.D.5    Yang, J.C.6
  • 20
    • 0002515045 scopus 로고
    • Heterozygosity, heterosis and fitness in outbreeding plants
    • Soule M. E. (ed.), Sunderland, Massachusetts: Sinauer Associates
    • Ledig F. T., Heterozygosity, heterosis and fitness in outbreeding plants. In: Soule M. E. (ed.), Conservation of biology: the science of scarcity and diversity. Sunderland, Massachusetts: Sinauer Associates, 1986, 77-104
    • (1986) Conservation of Biology: The Science of Scarcity and Diversity , pp. 77-104
    • Ledig, F.T.1
  • 21
    • 0001776181 scopus 로고
    • Ecological determinants of genetic structure in plant populations
    • Loveless M. D. and Hamrick J. L., Ecological determinants of genetic structure in plant populations. Annual Rew. Ecol. Syst., 1984, 15: 6-95
    • (1984) Annual Rew. Ecol. Syst. , vol.15 , pp. 6-95
    • Loveless, M.D.1    Hamrick, J.L.2
  • 22
    • 0034756767 scopus 로고    scopus 로고
    • Chloroplast DNA phylogeography of Cunninghamia konishii (Cupressaceae), an endemic conifer of Taiwan
    • Lu S. Y., Peng C. I., Cheng Y. P., Hong K. H., Chiang T. Y., Chloroplast DNA phylogeography of Cunninghamia konishii (Cupressaceae), an endemic conifer of Taiwan. Genome, 2001, 44: 797-807
    • (2001) Genome , vol.44 , pp. 797-807
    • Lu, S.Y.1    Peng, C.I.2    Cheng, Y.P.3    Hong, K.H.4    Chiang, T.Y.5
  • 23
    • 0014054519 scopus 로고
    • The detection of disease clustering and a generalized regression approach
    • Mantel N., The detection of disease clustering and a generalized regression approach. Cancer Res., 1967, 27: 209-220
    • (1967) Cancer Res. , vol.27 , pp. 209-220
    • Mantel, N.1
  • 24
    • 0033120607 scopus 로고    scopus 로고
    • Molecular phylogeography, intraspecific variation and the conservation of tree species
    • Newton A. C., Allnut T. R., Gillies A. C. M., Lowe A. J., Ennos R. A., Molecular phylogeography, intraspecific variation and the conservation of tree species. Trend Ecol. Evol., 1999, 14: 140-145
    • (1999) Trend Ecol. Evol. , vol.14 , pp. 140-145
    • Newton, A.C.1    Allnut, T.R.2    Gillies, A.C.M.3    Lowe, A.J.4    Ennos, R.A.5
  • 25
    • 0034564988 scopus 로고    scopus 로고
    • Detecting the form of selection from DNA sequence data
    • Otto S. P., Detecting the form of selection from DNA sequence data. Trends in Genet, 2000, 16: 526-529
    • (2000) Trends in Genet , vol.16 , pp. 526-529
    • Otto, S.P.1
  • 28
    • 0036007856 scopus 로고    scopus 로고
    • DNA from bird-dispersed seed and wind-disseminated pollen provides insights into postglacial colonization and population genetic structure of whitebark pine (Pinus albicaulis)
    • Richardson B. A., Brunsfeld S. J., Klopfenstein N. B., DNA from bird-dispersed seed and wind-disseminated pollen provides insights into postglacial colonization and population genetic structure of whitebark pine (Pinus albicaulis). Mol. Ecol., 2002, 11: 215-227
    • (2002) Mol. Ecol. , vol.11 , pp. 215-227
    • Richardson, B.A.1    Brunsfeld, S.J.2    Klopfenstein, N.B.3
  • 29
    • 0026548159 scopus 로고
    • Population growth makes waves in the distribution of pairwise genetic differences
    • Rogers A. R. and Harpending H., Population growth makes waves in the distribution of pairwise genetic differences. Mol. Biol. Evol., 1992, 9: 552-569
    • (1992) Mol. Biol. Evol. , vol.9 , pp. 552-569
    • Rogers, A.R.1    Harpending, H.2
  • 30
    • 0000621581 scopus 로고
    • Genetic evidence for a Pleistocene population explosion
    • Rogers A. R., Genetic evidence for a Pleistocene population explosion. Evolution, 1995, 49: 608-615
    • (1995) Evolution , vol.49 , pp. 608-615
    • Rogers, A.R.1
  • 31
    • 0032972599 scopus 로고    scopus 로고
    • DNASP version 3.0: An integrated program for molecular population genetics and molecular evolution genetic analysis
    • Rozas J. and Rozas R., DNASP version 3.0: an integrated program for molecular population genetics and molecular evolution genetic analysis. Bioinformatics, 1999, 15: 174-175
    • (1999) Bioinformatics , vol.15 , pp. 174-175
    • Rozas, J.1    Rozas, R.2
  • 32
    • 0032814604 scopus 로고    scopus 로고
    • Estimation of demographic parameters from the distribution of pairwise differences when the mutation rates vary among sites: Application to human mitochondrial DNA
    • Schneider S. and Excoffier L., Estimation of demographic parameters from the distribution of pairwise differences when the mutation rates vary among sites: Application to human mitochondrial DNA. Genetics, 1999, 152: 1079-1089
    • (1999) Genetics , vol.152 , pp. 1079-1089
    • Schneider, S.1    Excoffier, L.2
  • 35
    • 0026261665 scopus 로고
    • Universal primers for amplification of three non-coding regions of chloroplast DNA
    • Taberlet P., Gielly L., Pautou G., Bouvet J., Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Mol. Biol., 1991, 17: 1105-1109
    • (1991) Plant Mol. Biol. , vol.17 , pp. 1105-1109
    • Taberlet, P.1    Gielly, L.2    Pautou, G.3    Bouvet, J.4
  • 36
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F., Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics, 1989, 123: 585-595
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 37
    • 0026662698 scopus 로고
    • Cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III Cladogram estimation
    • Templeton A. R., Crandall K.A., Sing C. F. A., cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III Cladogram estimation. Genetics, 1992, 132: 619-633
    • (1992) Genetics , vol.132 , pp. 619-633
    • Templeton, A.R.1    Crandall, K.A.2    Sing, C.F.A.3
  • 38
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson J. D., Gibson T. J., Plewniak F., Jeanmougin F., Higgins D. G., The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res., 1997, 24: 4876-4882
    • (1997) Nucleic Acids Res. , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 42
    • 0024956733 scopus 로고
    • Paternal chloroplast DNA inheritance in a diallel cross of jack pine (Pinus banksiana Lamb.)
    • Wagner D. B., Govindaraju D. R., Yeatman C. W., Pitel, J. A., Paternal chloroplast DNA inheritance in a diallel cross of jack pine (Pinus banksiana Lamb.). J. Heredity, 1989, 80: 483-485
    • (1989) J. Heredity , vol.80 , pp. 483-485
    • Wagner, D.B.1    Govindaraju, D.R.2    Yeatman, C.W.3    Pitel, J.A.4
  • 43
    • 0035140701 scopus 로고    scopus 로고
    • Geographic pattern of genetic variation in Pinus resinosa: Area of greatest diversity is not the origin of post-glacial populations
    • Walter R., Epperson B. K., Geographic pattern of genetic variation in Pinus resinosa: area of greatest diversity is not the origin of post-glacial populations. Mol. Ecol., 2001, 10: 103-111
    • (2001) Mol. Ecol. , vol.10 , pp. 103-111
    • Walter, R.1    Epperson, B.K.2
  • 44
    • 0002545013 scopus 로고
    • Isolation by distance
    • Wright, S. Isolation by distance. Genetics, 1943, 28: 139-156
    • (1943) Genetics , vol.28 , pp. 139-156
    • Wright, S.1
  • 46
    • 0026296629 scopus 로고
    • Distribution of Dacrydium in south China during the late Quaternary
    • Zheng Z. Distribution of Dacrydium in south China during the late Quaternary. Acta Bot. Sinica., 1991, 33: 130-139
    • (1991) Acta Bot. Sinica. , vol.33 , pp. 130-139
    • Zheng, Z.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.