Chloroplast DNA phylogeography of Cunninghamia konishii (Cupressaceae), an endemic conifer of Taiwan

Genome

Volumn 44, Issue 5, 2001, Pages 797-807

  Lu, S Y ^a   Peng, C I ^a   Cheng, Y P ^a   Hong, K H ^a   Chiang, T Y ^a  

^a NATIONAL CHENG KUNG UNIVERSITY   (Taiwan)

Author keywords

AMOVA; Coalescence; cpDNA; Cunninghamia konishii; Cunninghamia lanceolata; Minimum spanning network; Phylogeography

Indexed keywords

ANALYSIS OF MOLECULAR VARIANCE; CHINA; CHLOROPLAST DNA; GENE SEQUENCE; GENETIC DIFFERENCE; GENETIC DIVERSITY; GENETIC HETEROGENEITY; GENETIC STRUCTURE; INHERITANCE; NEIGHBOR JOINING METHOD; NUCLEOTIDE SEQUENCE; PARSIMONY ANALYSIS; PHYLOGEOGRAPHY; POLYPHYLY; RURAL AREA; TAIWAN;

ALLELES; BASE SEQUENCE; CHINA; CUPRESSACEAE; DNA, CHLOROPLAST; DNA, INTERGENIC; HAPLOTYPES; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYMERASE CHAIN REACTION; SEEDS; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; TAIWAN; VARIATION (GENETICS);

CONIFEROPHYTA; CUNNINGHAMELLA; CUNNINGHAMELLA KONISHII; CUNNINGHAMELLA LANCEOLATA; CUNNINGHAMIA KONISHII; CUNNINGHAMIA LANCEOLATA; CUPRESSACEAE; EMBRYOPHYTA; LANCEOLATA;

EID: 0034756767     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/gen-44-5-797     Document Type: Article

References (56)

1. No genetic variation detected within isolated relic populations of Saxifraga cernua in the Alps using RAPD markers
2. Milankovitch cycles and their effects on species in ecological and evolutionary time
3. Postglacial migration and the loss of allozyme variation in northern populations of Asclepias exaltata (Asclepiadaceae)
4. Lineage sorting accounting for the disassociation between chloroplast and mitochondrial lineages in oaks of southern France
5. Phylogeography of the endemic plants in Taiwan
6. Rates and pattern of chloroplast DNA evolution
7. Empirical tests of some predictions from coalescent theory with applications to intra-specific phylogeny reconstructure
8. A set of universal primers for amplification of polymorphic non-coding regions of mitochondrial and chloroplast DNA in plants
9. Chloroplast DNA phylogeography of the common beech (Fagus sylvatica L.) in Europe
10. The linkage disequilibrium between chloroplast DNA and mitochondrial DNA haplotypes in Beta vulgaris ssp. maritima (L.): The usefulness of both genomes for population genetic studies
11. Phylogeographic structure of the white oaks throughout the European continent
12. Chloroplast DNA phylo-geography of the argan tree of Morocco
13. Using allele frequencies and geographic subdivision to reconstruct gene trees within a species: Molecular variance parsimony
14. Confidence limits on phylogenies: An approach using the bootstrap
15. Using chloroplast DNA to trace postglacial migration routes of oaks into Britain
16. The detection of deleterious selection using ancestors inferred from a phylogenetic history
17. CLUSTAL V: Improved software for multiple sequence alignment
18. Chloroplast DNA diversity among trees, populations and species in the California close-cone pines (Pinus radiata, Pinus muricata, and Pinus attenuata)
19. Genetic variability in relic Archangiopteris itoii based on RAPD fingerprints
20. Organelle DNAs phylogeography of Cycas taitungensis, a relict species in Taiwan
21. Gene genealogies and the coalescent process
22. Evolution of protein molecules
23. The stepping stone model of population structure and the decrease of genetic correlation with distance
24. Chloroplast DNA phylogeography of Alnus glutinosa (L.) Gaertn
25. An outline of Taiwan's Quaternary geohistory with a special discussion of the relation between natural history and cultural history in Taiwan
26. Comparison of the allozyme diversity in several populations of Chamaecyparis formosensis and Chamaecyparis taiwanensis
27. Comparison of genetic diversity between Cunninghamia konishii and C. lanceolata
28. Reexamination of the taxonomic status of Cunninghamia konishii and C. lanceolata based on the RFLPs of chloroplast trnD-trnT spacer
29. Patterns of intraspecific diversification in the Piriqueta caroliniana complex in southeastern North America and Bahamas
30. Genetics of Cunninghamia lanceolata Hook. 2. Genetic variation within and between two provenance samples
31. Rapid isolation of high molecular weight DNA
32. Chloroplast and mitochondrial DNA are paternally inherited in Sequoia sempervirens
33. Maximum likelihood estimation of the number of nucleotide substitutions from restriction sites data
34. Intra- and interspecific phylogeny of wild Fagopyrum (Polygonaceae) species based on nucleotide sequences of noncoding region in chloroplast DNA
35. Phylogenetic reconstruction of some conifer families: Role and significance of permineralized cone records
36. Insemination of the archegonium and fertilization in Taxus baccata L
37. Chloroplast DNA footprints of postglacial recolonization by oaks
38. GeoDis: A program for the cladistic nested analysis of the geographical distribution of genetic haplotypes
39. DnaSP: An integrated program for molecular population genetics and molecular evolution analysis. Version 3
40. Nested clade analyses of phylogeographic data: Testing hypotheses about gene flow and population history
41. Separating population structure from population history: A cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, Ambystoma tigrinum
42. Differentiation of mitochondrial DNA polymorphism in populations of five Japanses Abies
43. Molecular phylogeny of conifers using RFLP analysis of PCR-amplified specific chloroplast genes
44. Extinction and recolonization: Their effects on the genetic differentiation of local populations
45. Inheritance and linkage relationships of allozymes, and estimation of outcrossing rates in a seed orchard of Cunninghamia konishii Hay
46. Low genetic variation in Amentotaxus formosana Li revealed by isozyme analysis and random amplified polymorphic DNA markers
47. Genetic diversity and multilocus associations in Cunninghamia lanceolata (Lamb.) Hook. from the People's Republic of China