Molecular cloning and kinetic characterization of an aldehyde dehydrogenase gene in Klebsiella pneumoniae

Journal of the Formosan Medical Association

Volumn 104, Issue 4, 2005, Pages 221-230

  Ma, Li Chen ^a   Lee, Shou Lun ^b   Lee, Cha Ze ^c   Yin, Shih Jiun ^b   Wang, Jin Town ^a,c  

^a NATIONAL TAIWAN UNIVERSITY   (Taiwan)

^b NATIONAL DEFENSE MEDICAL CENTER   (Taiwan)

^c NATIONAL TAIWAN UNIVERSITY HOSPITAL   (Taiwan)

Author keywords

aldA; Aldehyde dehydrogenase; Cloning, molecular; Genes, bacterial; Klebsiella pneumoniae; Liver abscess

Indexed keywords

ALDEHYDE DEHYDROGENASE; GLYCERALDEHYDE; MESSENGER RNA; NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE; OXIDOREDUCTASE; RECOMBINANT ENZYME; ASTEMIZOLE;

ARTICLE; BACTERIAL STRAIN; CONTROLLED STUDY; ESCHERICHIA COLI; GENE EXPRESSION; GENOME; HUMAN; HUMAN TISSUE; KINETICS; KLEBSIELLA PNEUMONIAE; MOLECULAR CLONING; MOLECULAR WEIGHT; NORTHERN BLOTTING; NUCLEOTIDE SEQUENCE; PATHOGENICITY; SEPSIS; TAIWAN; UNIVERSITY HOSPITAL; AMINO ACID SEQUENCE; ENTEROBACTER INFECTION; ENZYME SPECIFICITY; ENZYMOLOGY; GENETICS; LIVER ABSCESS; MICROBIOLOGY; MOLECULAR GENETICS; VIRULENCE;

ALDEHYDE DEHYDROGENASE; AMINO ACID SEQUENCE; ASTEMIZOLE; BASE SEQUENCE; CLONING, MOLECULAR; ESCHERICHIA COLI; HUMANS; KLEBSIELLA INFECTIONS; KLEBSIELLA PNEUMONIAE; LIVER ABSCESS; MOLECULAR SEQUENCE DATA; SUBSTRATE SPECIFICITY; VIRULENCE;

EID: 33746724761     PISSN: 09296646     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (40)

1. Abbott S: Klebsiella, Enterobacter, Citrobacter and Serratia. In: Murray PR, Baron EJ, Pfaller MA, et al, eds. Manual of clinical microbiology. 7th ed. Washington, D.C.: American Society for Microbiology; 1999:457-82.
2. Eisenstein BI, Zaleznik DF: Enterobacteriaceae. In: Mandell GL, Bennet JE, Dolin R, eds. Principles and practice of infectious disease. 5th ed. New York: Churchill-Livingstone; 2000:2294-309.
3. Podschun R, Ullmann U: Klebsiella spp. as nosocomial pathogens: epidemiology, taxonomy, typing methods, and pathogenicity factors. Clin Microbiol Rev 1998;11:589-603.
4. Fung CP, Chang FY, Lee SC, et al: A global emerging disease of Klebsiella pneumoniae liver abscess: is serotype K1 an important factor for complicated endophthalmitis? Gut 2002;50:420-4.
5. Ko WC, Paterson DL, Sagnimeni AJ, et al: Community-acquired Klebsiella pneumoniae bacteremia: global differences in clinical patterns. Emerg Infect Dis 2002;8:160-6.
6. Fang CT, Chuang YP, Shun CT, et al: A novel virulence gene in Klebsiella pneumoniae strains causing primary liver abscess and septic metastatic complications. J Exp Med 2004;199:697-705.
7. Chou HC, Lee CZ, Ma LC, et al: Isolation of a chromosomal region of Klebsiella pneumoniae associated with allantoin metabolism and liver infection. Infect Immun 2004;72:3783-92.
8. Dong Y, Glasner JD, Blattner FR, et al: Genomic interspecies microarray hybridization: rapid discovery of three thousand genes in the maize endophyte, Klebsiella pneumoniae 342, by microarray hybridization with Escherichia coli K-12 open reading frames. Appl Environ Microbiol 2001;67:1911-21.
9. Blattner FR, Plunkett G, Bloch CA, et al: The complete genome sequence of Escherichia coli K-12. Science 1997;277:1453-74.
10. Richmond CS, Glasner JD, Mau R, et al: Genome-wide expression profiling in Escherichia coli K-12. Nucleic Acids Res 1999;27:3821-35.
11. Tao H, Bausch C, Richmond C, et al: Functional genomics: expression analysis of Escherichia coli growing on minimal and rich media. J Bacteriol 1999;181:6425-40.
12. Ang S, Lee CZ, Peck K, et al: Acid-induced gene expression in Helicobacter pylori: study in genomic scale by microarray. Infect Immun 2001;69:1679-86.
13. Chang CS, Chen LT, Yang JC, et al: Isolation of a Helicobacter pylori protein, FldA, associated with mucosa-associated lymphoid tissue lymphoma of the stomach. Gastroenterology 1999;117:82-8.
14. Baldoma L, Aguilar J: Involvement of lactaldehyde dehydrogenase in several metabolic pathways of Escherichia coli K12. J Biol Chem 1987;262:13991-6.
15. Hidalgo E, Chen YM, Lin EC, et al: Molecular cloning and DNA sequencing of the Escherichia coli K-12 aid gene encoding aldehyde dehydrogenase. J Bacteriol 1991;173:6118-23.
16. Sridhara S, Wu TT: Purification and properties of lactaldehyde dehydrogenase from Escherichia coli. J Biol Chem 1969;244:5233-8.
17. Lowry OH, Rosebrough NJ, Farr AL, et al: Protein measurement with the Folin phenol reagent. J Biol Chem 1951;193:265-75.
18. Cleland WW: Statistical analysis of enzyme kinetic data. Methods Enzymol 1979;63:103-38.
19. Low D, Braaten B, van der Woude M: Fimbriae. In: Frederick CN, ed. Escherichia coli and Salmonella. Washington, D.C.: American Society for Microbiology; 1999:146-57.
20. Perna NT, Plunkett G, 3rd, Burland V, et al: Genome sequence of enterohaemorrhagic Escherichia coli O157:H7. Nature 2001;409:529-33.
21. Hempel J, Nicholas H, Lindahl R: Aldehyde dehydrogenases: widespread structural and functional diversity within a shared framework. Protein Sci 1993;2:1890-900.
22. Perozich J, Nicholas H, Wang BC, et al: Relationships within the aldehyde dehydrogenase extended family. Protein Sci 1999;8:137-46.
23. Boyd DA, Cvitkovitch DG, Hamilton IR: Sequence, expression, and function of the gene for the nonphosphorylating, NADP-dependent glyceraldehyde-3- phosphate dehydrogenase of Streptococcus mutans. J Bacteriol 1995;177:2622-7.
24. Heidelberg JF, Eisen JA, Nelson WC, et al: DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae. Nature 2000;406:477-83.
25. O'Connell MJ, Kelly JM: Physical characterization of the aldehyde-dehydrogenase-encoding gene of Aspergillus niger. Gene 1989;84:173-80.
26. Saigal D, Cunningham SJ, Farres J, et al: Molecular cloning of the mitochondrial aldehyde dehydrogenase gene of Saccharomyces cerevisiae by genetic complementation. J Bacteriol 1991;173:3199-208.
27. Hsu LC, Tani K, Fujiyoshi T, et al: Cloning of cDNAs for human aldehyde dehydrogenases 1 and 2. Proc Natl Acad Sci U S A 1985;82:3771-5.
28. Braun T, Bober E, Singh S, et al: Evidence for a signal peptide at the amino-terminal end of human mitochondrial aldehyde dehydrogenase. FEBS Lett 1987;215:233-6.
29. Hsu LC, Chang WC, Shibuya A, et al: Human stomach aldehyde dehydrogenase cDNA and genomic cloning, primary structure, and expression in Escherichia coli. J Biol Chem 1992;267:3030-7.
30. Andrade MA, Ouzounis C, Sander C, et al: Functional classes in the three domains of life. J Mol Evol 1999;49:551-7.
31. Bansal AK: An automated comparative analysis of 17 complete microbial genomes. Bioinformatics 1999;15:900-8.
32. Tamames J, Casari G, Ouzounis C, et al: Conserved clusters of functionally related genes in two bacterial genomes. J Mol Evol 1997;44:66-73.
33. Vasiliou V, Bairoch A, Tipton KF, et al: Eukaryotic aldehyde dehydrogenase (ALDH) genes: human polymorphisms, and recommended nomenclature based on divergent evolution and chromosomal mapping. Pharmacogenetics 1999;9:421-34.
34. Yoshida A, Rzhetsky A, Hsu LC, et al: Human aldehyde dehydrogenase gene family. Eur J Biochem 1998;251:549-57.
35. Parsot C, Mekalanos JJ: Expression of the Vibrio cholerae gene encoding aldehyde dehydrogenase is under control of ToxR, the cholera toxin transcriptional activator. J Bacteriol 1991;173:2842-51.
36. Chao YC, Liou SR, Chung YY, et al: Polymorphism of alcohol and aldehyde dehydrogenase genes and alcoholic cirrhosis in Chinese patients. Hepatology 1994;19:360-6.
37. Chang SC, Fang CT, Hsueh PR, et al: Klebsiella pneumoniae isolates causing liver abscess in Taiwan. Diagn Microbiol Infect Dis 2000;37:279-84.
38. Marchal S, Branlant G: Characterization of the amino acids involved in substrate specificity of nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase from Streptococcus mutans. J Biol Chem 2002;277:39235-42.
39. Ni L, Sheikh S, Weiner H: Involvement of glutamate 399 and lysine 192 in the mechanism of human liver mitochondrial aldehyde dehydrogenase. J Biol Chem 1997;272:18823-6.
40. Sheikh S, Ni L, Hurley TD, et al: The potential roles of the conserved amino acids in human liver mitochondrial aldehyde dehydrogenase. J Biol Chem 1997;272:18817-22.