'Candidatus Paenicardinium endonii' an endosymbiont of the plant-parasitic nematode Heterodera glycines (Nemata: Tylenchida), affiliated to the phylum Bacteroidetes

International Journal of Systematic and Evolutionary Microbiology

Volumn 56, Issue 7, 2006, Pages 1697-1702

  Noel, Gregory R ^a   Atibalentja, Ndeme ^b  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

^b UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA TOPOISOMERASE (ATP HYDROLYSING) B; RNA 16S;

ARTICLE; BACTEROIDETES; CARDINIUM HERTIGII; CELL INCLUSION; CONTROLLED STUDY; ENCARSIA; ENDOSYMBIONT; FEMALE; GLOBODERA ROSTOCHIENSIS; HETERODERA GLYCINES; HETERODERA GOETTINGIANA; INTESTINE FLORA; MICROBIAL MORPHOLOGY; MICROFILAMENT; NEMATODE; NONHUMAN; NUCLEOTIDE SEQUENCE; OOCYTE; OVARY; PAENICARDINIUM ENDONII; PHYLOGENY; PHYLUM; PLANT DISEASE; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SOYBEAN; SPERMATOZOON; SUBCUTANEOUS TISSUE; TAXONOMIC RANK; TRANSMISSION ELECTRON MICROSCOPY; WASP;

ANIMAL STRUCTURES; ANIMALS; BACTERIAL PROTEINS; BACTEROIDETES; DNA GYRASE; DNA, BACTERIAL; DNA, RIBOSOMAL; GENES, RRNA; MICROFILAMENTS; MICROSCOPY, ELECTRON, TRANSMISSION; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; SYMBIOSIS; TYLENCHOIDEA;

BACTERIA (MICROORGANISMS); BACTEROIDETES; CANDIDATUS CARDINIUM HERTIGII; ENCARSIA; GLOBODERA ROSTOCHIENSIS; GLYCINE MAX; HETERODERA GLYCINES; HETERODERA GOETTINGIANA; NEMATODA; TYLENCHIDA;

EID: 33746238193     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.64234-0     Document Type: Article

References (20)

1. Altschul, S. F., Madden, T. L., Schäfer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
2. Ashelford, K. E., Weightman, A. J. & Fry, J. C. (2002). PRIMROSE: a computer program for generating and estimating the phylogenetic range of 16S rRNA oligonucleotide probes and primers in conjunction with the RDP-II database. Nucleic Acids Res 30, 3481-3489.
3. Atibalentja, N., Noel, G. R. & Ciancio, A. (2004). A simple method for PCR-amplification, cloning, and sequencing of Pasteuria 16S rDNA from small numbers of endospores. J Nematol 36, 100-105.
4. Cole, J. R., Chai, B., Marsh, T. L. & 8 other authors (2003). The Ribosomal Database Project (RDP-11): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Res 31, 442-443.
5. Endo, B. Y. (1979). The ultrastructure and distribution of an intracellular bacterium-like microorganism in tissues of larvae of the soybean cyst nematode, Heterodera glycines. J Ultrastruct Res 67, 1-14.
6. Garrity, G. M. & Holt, J. G. (2001). The road ruap to the Manual. In Bergey's Manual of Systematic Bacteriology, 2nd edn, Vol. 1, pp. 119-166. Edited by D. R. Boone, R. W. Castenholz & G. M. Garrity. New York: Springer.
7. Hanaichi, T., Sato, T., Iwamoto, T., Malavasi-Yamashiro, J., Hoshino, M. & Mizuno, N. (1986). A stable lead by modification of Sato's method. J Electron Microsc 35, 304-306.
8. Kaya, H. K. (1993). Entomogenous and entomopatbogenic nematodes in biological control. In Plant Parasitic Nematodes in Temperate Agriculture, pp. 565-591. Edited by K. Evans, D. L. Trudgill & J. M. Webster. Wallingford, UK: CAB International.
9. Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. New York: Wiley.
10. Ludwig, W., Strunk, O., Klugbauer, S., Klugbauer, N., Weizenegger, M., Neumaier, J., Bachleitner, M. & Schleifer, K. H. (1998). Bacterial phylogeny based on comparative sequence analysis. Electrophoresis 19, 554-568.
11. Maddison, D. R. & Maddison, W. P. (2001). MacClade version 4.0.1. Sunderland, MA: Sinauer Associates.
12. Murray, R. G. E. & Stackebrandt, E. (1995). Taxonomic note: implementation of the provisional status Candidatus for incompletely described procaryotes. Int J Syst Bacteriol 45, 186-187.
13. Saint André, A. V., Blackwell, N. M., Hall, L. R. & 9 other authors (2002). The role of endosymbiotic Wolbachia bacteria in the pathogenesis of river blindness. Science 295, 1892-1895.
14. Shepherd, A. M., Clark, S. A. & Kempton, A. (1973). An intracellular micro-organism associated with tissues of Heterodera spp. Nematologica 19, 31-34.
15. Swofford, D. L. (2003). PAUP* - Phylogenetic Analysis Using Parsimony*and other methods, version 4. Sunderland, MA: Sinauer Associates.
16. Taylor, M. J. (2003). Wolbachia in the inflammatory pathogenesis of human filariasis. Ann N Y Acad Sci 990, 444-449.
17. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
18. Vandekerckhove, T. T. M., Willems, A., Gillis, M. & Coomans, A. (2000). Occurrence of novel verrucomicrobial species, endosymbiotic and associated with parthenogenesis in Xiphinema americanum-group species (Nematoda, Longidoridae). Int J Syst Evol Microbiol 50, 2197-2205.
19. Yamamoto, S. & Harayama, S. (1995). PCR amplification and direct sequencing of gyrB genes with universal primers and their application to the detection and taxonomic analysis of Pseudomonas putida strains. Appl Environ Microbiol 61, 1104-1109.
20. Zchori-Fein, E., Perlman, S. J., Kelly, S. E., Katzir, N. & Hunter, M. S. (2004). Characterization of a 'Bacteroidetes' symbiont in Encarsia wasps (Hymenoptera: Aphelinidae): proposal of 'Candidatus Cardinium hertigii'. Int J Syst Evol Microbiol 54, 961-968.