메뉴 건너뛰기




Volumn 166, Issue 1 I, 2006, Pages 1-8

The role of hydration in the distribution of free radical trapping in directly ionized DNA

Author keywords

[No Author keywords available]

Indexed keywords

DNA; FREE RADICAL; NUCLEOTIDE; SUGAR PHOSPHATE;

EID: 33745925581     PISSN: 00337587     EISSN: None     Source Type: Journal    
DOI: 10.1667/RR3585.1     Document Type: Article
Times cited : (24)

References (56)
  • 1
    • 0020050364 scopus 로고
    • Radiolytic pathways in gamma-irradiated DNA: Influence of chemical and conformational factors
    • S. Gregoli, M. Olast and A. Bertinchamps, Radiolytic pathways in gamma-irradiated DNA: Influence of chemical and conformational factors. Radiat. Res. 89, 238-254 (1982).
    • (1982) Radiat. Res. , vol.89 , pp. 238-254
    • Gregoli, S.1    Olast, M.2    Bertinchamps, A.3
  • 2
    • 0026526993 scopus 로고
    • Free radicals from irradiated lyophilized DNA: Influence of water of hydration
    • J. Hüttermann, M. Röhrig and W. Köhnlein, Free radicals from irradiated lyophilized DNA: Influence of water of hydration. Int. J. Radiat. Biol. 61, 299-313 (1992).
    • (1992) Int. J. Radiat. Biol. , vol.61 , pp. 299-313
    • Hüttermann, J.1    Röhrig, M.2    Köhnlein, W.3
  • 3
    • 0026600950 scopus 로고
    • Radiation-induced DNA damage as a function of hydration. I. Release of unaltered bases
    • S. G. Swarts, M. D. Sevilla, D. Becker, C. J. Tokar and K. T. Wheeler, Radiation-induced DNA damage as a function of hydration. I. Release of unaltered bases. Radiat. Res. 129, 333-344 (1992).
    • (1992) Radiat. Res. , vol.129 , pp. 333-344
    • Swarts, S.G.1    Sevilla, M.D.2    Becker, D.3    Tokar, C.J.4    Wheeler, K.T.5
  • 4
    • 0027482117 scopus 로고
    • Hydration effects on free radical yields in DNA X-irradiated at 4 K
    • N. Mroczka and W. A. Bernhard, Hydration effects on free radical yields in DNA X-irradiated at 4 K. Radiat. Res. 135, 155-159 (1993).
    • (1993) Radiat. Res. , vol.135 , pp. 155-159
    • Mroczka, N.1    Bernhard, W.A.2
  • 5
    • 0027430726 scopus 로고
    • The influence of hydration on the absolute yields of primary ionic free radicals in gamma-irradiated DNA at 77 K. I. Total radical yields
    • W. Wang, D. Becker and M. D. Sevilla, The influence of hydration on the absolute yields of primary ionic free radicals in gamma-irradiated DNA at 77 K. I. Total radical yields. Radiat. Res. 135, 146-154 (1993).
    • (1993) Radiat. Res. , vol.135 , pp. 146-154
    • Wang, W.1    Becker, D.2    Sevilla, M.D.3
  • 6
    • 0027979564 scopus 로고
    • The influence of hydration on the absolute yields of primary free radicals in gamma-irradiated DNA at 77 K. II. Individual radical yields
    • W. Wang, M. Yan, D. Becker and M. D. Sevilla, The influence of hydration on the absolute yields of primary free radicals in gamma-irradiated DNA at 77 K. II. Individual radical yields. Radiat. Res. 137, 2-10 (1994).
    • (1994) Radiat. Res. , vol.137 , pp. 2-10
    • Wang, W.1    Yan, M.2    Becker, D.3    Sevilla, M.D.4
  • 7
    • 0028139093 scopus 로고
    • ESR detection at 77 K of the hydroxyl radical in the hydration layer of gamma-irradiated DNA
    • D. Becker, T. LaVere and M. D. Sevilla, ESR detection at 77 K of the hydroxyl radical in the hydration layer of gamma-irradiated DNA. Radiat. Res. 140, 123-129 (1994).
    • (1994) Radiat. Res. , vol.140 , pp. 123-129
    • Becker, D.1    LaVere, T.2    Sevilla, M.D.3
  • 8
    • 33745921354 scopus 로고
    • Effects of hydration on free radical trapping in x-irradiated frozen polynucleotides
    • (A. F. Fuciarelli and J. D. Zimbrick, Eds.). Battelle Press, Columbus, OH
    • N. Mroczka and W. A. Bernhard, Effects of hydration on free radical trapping in x-irradiated frozen polynucleotides. In Radiation Damage in DNA: Structure/Function Relationships at Early Times (A. F. Fuciarelli and J. D. Zimbrick, Eds.), pp. 139-144. Battelle Press, Columbus, OH, 1995.
    • (1995) Radiation Damage in DNA: Structure/Function Relationships at Early Times , pp. 139-144
    • Mroczka, N.1    Bernhard, W.A.2
  • 9
    • 0030008802 scopus 로고    scopus 로고
    • Yields of OH in gamma-irradiated DNA as a function of DNA hydration: Hole transfer in competition with OH formation
    • T. LaVere, D. Becker and M. D. Sevilla, Yields of OH in gamma-irradiated DNA as a function of DNA hydration: Hole transfer in competition with OH formation. Radiat. Res. 145, 673-680 (1996).
    • (1996) Radiat. Res. , vol.145 , pp. 673-680
    • LaVere, T.1    Becker, D.2    Sevilla, M.D.3
  • 10
    • 0029947555 scopus 로고    scopus 로고
    • Radiation-induced DNA damage as a function of hydration. II. Base damage from electron-loss centers
    • S. G. Swarts, D. Becker, M. D. Sevilla and K. T. Wheeler, Radiation-induced DNA damage as a function of hydration. II. Base damage from electron-loss centers. Radiat. Res. 145, 304-314 (1996).
    • (1996) Radiat. Res. , vol.145 , pp. 304-314
    • Swarts, S.G.1    Becker, D.2    Sevilla, M.D.3    Wheeler, K.T.4
  • 11
    • 0032907838 scopus 로고    scopus 로고
    • The effect of packing and conformation on free radical yields in films of variably hydrated DNA
    • M. T. Milano and W. A. Bernhard, The effect of packing and conformation on free radical yields in films of variably hydrated DNA. Radiat. Res. 151, 39-49 (1999).
    • (1999) Radiat. Res. , vol.151 , pp. 39-49
    • Milano, M.T.1    Bernhard, W.A.2
  • 12
    • 0033865318 scopus 로고    scopus 로고
    • On the efficiency of hole and electron transfer from the hydration layer to DNA: An EPR study of crystalline DNA X-irradiated at 4 K
    • M. G. Debije, M. D. Strickler and W. A. Bernhard, On the efficiency of hole and electron transfer from the hydration layer to DNA: An EPR study of crystalline DNA X-irradiated at 4 K. Radiat. Res. 154, 163-170 (2000).
    • (2000) Radiat. Res. , vol.154 , pp. 163-170
    • Debije, M.G.1    Strickler, M.D.2    Bernhard, W.A.3
  • 13
    • 0027973491 scopus 로고
    • The complexity of DNA damage: Relevance to biological consequences
    • J. F. Ward, The complexity of DNA damage: Relevance to biological consequences. Int. J. Radiat. Biol. 66, 427-432 (1994).
    • (1994) Int. J. Radiat. Biol. , vol.66 , pp. 427-432
    • Ward, J.F.1
  • 15
    • 0027976408 scopus 로고
    • Initial events in the cellular effects of ionizing radiations: Clustered damage in DNA
    • D. T. Goodhead, Initial events in the cellular effects of ionizing radiations: Clustered damage in DNA. Int. J. Radiat. Biol. 65, 7-17 (1994).
    • (1994) Int. J. Radiat. Biol. , vol.65 , pp. 7-17
    • Goodhead, D.T.1
  • 16
    • 0000077101 scopus 로고    scopus 로고
    • Clustered damage in DNA: Estimates from track-structure simulations
    • D. T. Goodhead and H. Nikjoo, Clustered damage in DNA: Estimates from track-structure simulations. Radiat. Res. 148, 485-486 (1997).
    • (1997) Radiat. Res. , vol.148 , pp. 485-486
    • Goodhead, D.T.1    Nikjoo, H.2
  • 19
    • 0026682877 scopus 로고
    • Free radical yields in A:T polydeoxynucleotides, oligodeoxynucleotides, and monodeoxynucleotides at 4 K
    • R. A. Spalletta and W. A. Bernhard, Free radical yields in A:T polydeoxynucleotides, oligodeoxynucleotides, and monodeoxynucleotides at 4 K. Radiat. Res. 130, 7-14 (1992).
    • (1992) Radiat. Res. , vol.130 , pp. 7-14
    • Spalletta, R.A.1    Bernhard, W.A.2
  • 20
    • 0001156556 scopus 로고
    • Sites of electron trapping in DNA as determined by ESR of one-electron reduced oligonucleotides
    • W. A. Bernhard, Sites of electron trapping in DNA as determined by ESR of one-electron reduced oligonucleotides. J. Phys. Chem. 93, 2187-2189 (1989).
    • (1989) J. Phys. Chem. , vol.93 , pp. 2187-2189
    • Bernhard, W.A.1
  • 21
    • 0000722997 scopus 로고
    • Initial sites of one-electron attachment in DNA
    • (E. M. Fielden and P. O'Neill, Eds.). Springer-Verlag, Berlin
    • W. A. Bernhard, Initial sites of one-electron attachment in DNA. In The Early Effects of Radiation on DNA (E. M. Fielden and P. O'Neill, Eds.), pp. 141-154. Springer-Verlag, Berlin, 1991.
    • (1991) The Early Effects of Radiation on DNA , pp. 141-154
    • Bernhard, W.A.1
  • 22
    • 0028346741 scopus 로고
    • Protonation of nucleobase anions in gamma-irradiated DNA and model systems. Which DNA base is the ultimate sink for the electron?
    • W. Wang and M. D. Sevilla, Protonation of nucleobase anions in gamma-irradiated DNA and model systems. Which DNA base is the ultimate sink for the electron? Radiat. Res. 138, 9-17 (1994).
    • (1994) Radiat. Res. , vol.138 , pp. 9-17
    • Wang, W.1    Sevilla, M.D.2
  • 23
    • 33751499331 scopus 로고
    • Relative abundances of primary ion radicals in gamma-irradiated DNA: Cytosine vs. thymine anions and guanine vs. adenine cations
    • M. D. Sevilla, D. Becker, M. Yan and S. Summerfield, Relative abundances of primary ion radicals in gamma-irradiated DNA: Cytosine vs. thymine anions and guanine vs. adenine cations. J. Phys. Chem. 95, 3409-3415 (1991).
    • (1991) J. Phys. Chem. , vol.95 , pp. 3409-3415
    • Sevilla, M.D.1    Becker, D.2    Yan, M.3    Summerfield, S.4
  • 24
    • 0008551914 scopus 로고
    • Interaction of ionizing radiation with matter
    • (Farhataziz and M. A. J. Rodgers, Eds.). VCH Publishers, New York
    • A. Chatterjee, Interaction of ionizing radiation with matter. In Radiation Chemistry. Principles and Applications (Farhataziz and M. A. J. Rodgers, Eds.), pp. 1-28. VCH Publishers, New York, 1987.
    • (1987) Radiation Chemistry. Principles and Applications , pp. 1-28
    • Chatterjee, A.1
  • 25
    • 0013622923 scopus 로고
    • The application of chemical models to cellular DNA damage
    • (E. M. Fielden and P. O'Neill, Eds.). Springer-Verlag, Berlin
    • W. R. Holley and A. Chatterjee, The application of chemical models to cellular DNA damage. In The Early Effects of Radiation on DNA (E. M. Fielden and P. O'Neill, Eds.), pp. 195-209. Springer-Verlag, Berlin, 1991.
    • (1991) The Early Effects of Radiation on DNA , pp. 195-209
    • Holley, W.R.1    Chatterjee, A.2
  • 26
    • 0025886472 scopus 로고
    • Energy deposition in small cylindrical targets by monoenergetic electrons
    • H. Nikjoo, D. T. Goodhead, D. E. Charlton and H. G. Paretzke, Energy deposition in small cylindrical targets by monoenergetic electrons. Int. J. Radiat. Biol. 60, 739-756 (1991).
    • (1991) Int. J. Radiat. Biol. , vol.60 , pp. 739-756
    • Nikjoo, H.1    Goodhead, D.T.2    Charlton, D.E.3    Paretzke, H.G.4
  • 27
    • 0028960975 scopus 로고
    • Electron energy-loss distributions in solid, dry DNA
    • J. A. LaVerne and S. M. Pimblott, Electron energy-loss distributions in solid, dry DNA. Radiat. Res. 141, 208-215 (1995).
    • (1995) Radiat. Res. , vol.141 , pp. 208-215
    • LaVerne, J.A.1    Pimblott, S.M.2
  • 28
    • 0028075885 scopus 로고
    • Combination is the dominant free radical process initiated in DNA by ionizing radiation: An overview based on solid-state EPR studies
    • W. A. Bernhard, N. Mroczka and J. Barnes, Combination is the dominant free radical process initiated in DNA by ionizing radiation: An overview based on solid-state EPR studies. Int. J. Radiat. Biol. 66, 491-497 (1994).
    • (1994) Int. J. Radiat. Biol. , vol.66 , pp. 491-497
    • Bernhard, W.A.1    Mroczka, N.2    Barnes, J.3
  • 29
    • 0032882889 scopus 로고    scopus 로고
    • Free radicals from lyophilized 'dry' DNA bombarded with heavy-ions as studied by electron spin resonance spectroscopy
    • B. Weiland and J. Hüttermann, Free radicals from lyophilized 'dry' DNA bombarded with heavy-ions as studied by electron spin resonance spectroscopy. Int. J. Radiat. Biol. 75, 1169-1175 (1999).
    • (1999) Int. J. Radiat. Biol. , vol.75 , pp. 1169-1175
    • Weiland, B.1    Hüttermann, J.2
  • 30
    • 10044286136 scopus 로고    scopus 로고
    • What is the initial chemical precursor of DNA strand breaks generated by direct-type effects?
    • S. Purkayastha and W. A. Bernhard, What is the initial chemical precursor of DNA strand breaks generated by direct-type effects? J. Phys. Chem. B 108, 18377-18382 (2004).
    • (2004) J. Phys. Chem. B , vol.108 , pp. 18377-18382
    • Purkayastha, S.1    Bernhard, W.A.2
  • 31
    • 19444383778 scopus 로고    scopus 로고
    • Sugar radicals in DNA: Isolation of neutral radicals in gamma-irradiated DNA by hole and electron scavenging
    • L. I. Shukla, R. Pazdro, D. Becker and M. D. Sevilla, Sugar radicals in DNA: Isolation of neutral radicals in gamma-irradiated DNA by hole and electron scavenging. Radiat. Res. 163, 591-602 (2005).
    • (2005) Radiat. Res. , vol.163 , pp. 591-602
    • Shukla, L.I.1    Pazdro, R.2    Becker, D.3    Sevilla, M.D.4
  • 32
    • 25444496790 scopus 로고    scopus 로고
    • Correlation of free radical yields with strand break yields produced in plasmid DNA by the direct effect of ionizing radiation
    • S. Purkayastha, J. R. Milligan and W. A. Bernhard, Correlation of free radical yields with strand break yields produced in plasmid DNA by the direct effect of ionizing radiation. J. Phys. Chem. B 109, 16967-16973 (2005).
    • (2005) J. Phys. Chem. B , vol.109 , pp. 16967-16973
    • Purkayastha, S.1    Milligan, J.R.2    Bernhard, W.A.3
  • 34
    • 2142811992 scopus 로고
    • Hydration of deoxyribonucleic acid I. A gravimetric study
    • R. H. Stokes and R. A. Robinson, Hydration of deoxyribonucleic acid I. A gravimetric study. Ind. Eng. Chem. 41, 2011-2012 (1948).
    • (1948) Ind. Eng. Chem. , vol.41 , pp. 2011-2012
    • Stokes, R.H.1    Robinson, R.A.2
  • 35
    • 0001975967 scopus 로고
    • Design and operation of a variable temperature accessory for Q-band ESR
    • K. R. Mercer and W. A. Bernhard, Design and operation of a variable temperature accessory for Q-band ESR. J. Magn. Reson. 74, 66-71 (1987).
    • (1987) J. Magn. Reson. , vol.74 , pp. 66-71
    • Mercer, K.R.1    Bernhard, W.A.2
  • 36
    • 0032764073 scopus 로고    scopus 로고
    • Free radical yields in crystalline DNA X-irradiated at 4 K
    • M. G. Debije and W. A. Bernhard, Free radical yields in crystalline DNA X-irradiated at 4 K. Radiat. Res. 152, 583-589 (1999).
    • (1999) Radiat. Res. , vol.152 , pp. 583-589
    • Debije, M.G.1    Bernhard, W.A.2
  • 37
    • 0000169232 scopus 로고
    • A novel non-linear least squares fitting routine
    • D. W. Marquardt, A novel non-linear least squares fitting routine. J. Soc. Ind. Appl. Math. 11, 431-441 (1963).
    • (1963) J. Soc. Ind. Appl. Math. , vol.11 , pp. 431-441
    • Marquardt, D.W.1
  • 38
    • 0027249405 scopus 로고
    • Radical ions and their reactions in DNA constituents: ESR/ENDOR studies of radiation damage in the solid state
    • D. M. Close, Radical ions and their reactions in DNA constituents: ESR/ENDOR studies of radiation damage in the solid state. Radiat. Res. 135, 1-15 (1993).
    • (1993) Radiat. Res. , vol.135 , pp. 1-15
    • Close, D.M.1
  • 39
    • 0000967926 scopus 로고
    • One-electron reduced cytosine in acidic glasses: Conformational states before and after proton transfer
    • J. P. Barnes and W. A. Bernhard, One-electron reduced cytosine in acidic glasses: conformational states before and after proton transfer. J. Phys. Chem. 98, 887-893 (1994).
    • (1994) J. Phys. Chem. , vol.98 , pp. 887-893
    • Barnes, J.P.1    Bernhard, W.A.2
  • 42
    • 0030980402 scopus 로고    scopus 로고
    • Where are the sugar radicals in irradiated DNA?
    • D. M. Close, Where are the sugar radicals in irradiated DNA? Radiat. Res. 147, 663-673 (1997).
    • (1997) Radiat. Res. , vol.147 , pp. 663-673
    • Close, D.M.1
  • 43
    • 0031664568 scopus 로고    scopus 로고
    • Free radicals from x-irradiated 'dry' and hydrated lyophilized DNA as studied by electron spin resonance spectroscopy: Analysis of spectral components between 77K and room temperature
    • B. Weiland and J. Hüttermann, Free radicals from x-irradiated 'dry' and hydrated lyophilized DNA as studied by electron spin resonance spectroscopy: Analysis of spectral components between 77K and room temperature. Int. J. Radiat. Biol. 74, 341-358 (1998).
    • (1998) Int. J. Radiat. Biol. , vol.74 , pp. 341-358
    • Weiland, B.1    Hüttermann, J.2
  • 44
    • 0035000673 scopus 로고    scopus 로고
    • 3′ sugar radical in crystalline d(CTCTCGAGAG) X-irradiated at 4 K
    • 3′ sugar radical in crystalline d(CTCTCGAGAG) X-irradiated at 4 K. Radiat. Res. 155, 687-692 (2001).
    • (2001) Radiat. Res. , vol.155 , pp. 687-692
    • Debije, M.G.1    Bernhard, W.A.2
  • 47
    • 0021073779 scopus 로고
    • Construction of improved M13 vectors using oligodeoxynucleotide directed mutagenesis
    • J. Norrander, T. Kempe and J. Messing, Construction of improved M13 vectors using oligodeoxynucleotide directed mutagenesis. Gene 26, 101-106 (1983).
    • (1983) Gene , vol.26 , pp. 101-106
    • Norrander, J.1    Kempe, T.2    Messing, J.3
  • 48
    • 0021943518 scopus 로고
    • Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors
    • C. Yanisch-Perron, J. Vieira and J. Messing, Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33, 103-119 (1985).
    • (1985) Gene , vol.33 , pp. 103-119
    • Yanisch-Perron, C.1    Vieira, J.2    Messing, J.3
  • 49
    • 0000163631 scopus 로고
    • The chemical consequences of radiation damage to DNA
    • he chemical consequences of radiation damage to DNA
    • D. Becker and M. D. Sevilla, The chemical consequences of radiation damage to DNA. he chemical consequences of radiation damage to DNA. Adv. Radiat. Biol. 17, 121-180 (1993).
    • (1993) Adv. Radiat. Biol. , vol.17 , pp. 121-180
    • Becker, D.1    Sevilla, M.D.2
  • 51
    • 0034300984 scopus 로고    scopus 로고
    • Experimental and theoretical investigation of the mechanism of radiation-induced radical formation in hydrogen-bonded cocrystals of 1-methylcytosine and 5-fluorouracil
    • D. M. Close, L. A. Eriksson, E. O. Hole, E. Sagstuen and W. H. Nelson, Experimental and theoretical investigation of the mechanism of radiation-induced radical formation in hydrogen-bonded cocrystals of 1-methylcytosine and 5-fluorouracil. J. Phys. Chem. B 104, 9343-9350 (2000).
    • (2000) J. Phys. Chem. B , vol.104 , pp. 9343-9350
    • Close, D.M.1    Eriksson, L.A.2    Hole, E.O.3    Sagstuen, E.4    Nelson, W.H.5
  • 52
    • 0016697970 scopus 로고
    • Ionic base radicals in gamma-irradiated oriented non-deuterated and fully deuterated DNA
    • A. Gräslund, A. Ehrenberg, A. Rupprecht, G. Stroem and H. Crespi, Ionic base radicals in gamma-irradiated oriented non-deuterated and fully deuterated DNA. Int. J. Radiat. Biol. 28, 313-323 (1975).
    • (1975) Int. J. Radiat. Biol. , vol.28 , pp. 313-323
    • Gräslund, A.1    Ehrenberg, A.2    Rupprecht, A.3    Stroem, G.4    Crespi, H.5
  • 53
    • 0024539741 scopus 로고
    • ESR characteristics of one-electron reduced thymine in monomer, oligomer, and polymer derivatives
    • W. A. Bernhard and A. Z. Patrzalek, ESR characteristics of one-electron reduced thymine in monomer, oligomer, and polymer derivatives. Radiat. Res. 117, 379-394 (1989).
    • (1989) Radiat. Res. , vol.117 , pp. 379-394
    • Bernhard, W.A.1    Patrzalek, A.Z.2
  • 55
    • 0034110914 scopus 로고    scopus 로고
    • Direct radiation damage to crystalline DNA: What is the source of unaltered base release?
    • Y. Razskazovskiy, M. G. Debije and W. A. Bernhard, Direct radiation damage to crystalline DNA: What is the source of unaltered base release? Radiat. Res. 153, 436-441 (2000).
    • (2000) Radiat. Res. , vol.153 , pp. 436-441
    • Razskazovskiy, Y.1    Debije, M.G.2    Bernhard, W.A.3
  • 56
    • 0003467423 scopus 로고
    • Track models and radiation chemical yields
    • (Farhataziz and M. A. J. Rodgers, Eds.). VCH Publishers, Inc., New York
    • A. Chatterjee and J. L. Magee, Track models and radiation chemical yields. In Radiation Chemistry. Principles and Applications (Farhataziz and M. A. J. Rodgers, Eds.), pp. 173-199. VCH Publishers, Inc., New York, 1987.
    • (1987) Radiation Chemistry. Principles and Applications , pp. 173-199
    • Chatterjee, A.1    Magee, J.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.