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Volumn 7, Issue , 2006, Pages

A graphical model approach to automated classification of protein subcellular location patterns in multi-cell images

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY OF CLASSIFICATIONS; AUTOMATED CLASSIFICATION; CLASSIFICATION ACCURACY; EXPERIMENTAL CONDITIONS; FLUORESCENCE MICROSCOPE IMAGES; GRAPHICAL REPRESENTATIONS; PROTEIN SUBCELLULAR LOCATION; SUBCELLULAR STRUCTURE;

EID: 33745835457     PISSN: 14712105     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-7-90     Document Type: Article
Times cited : (25)

References (28)
  • 1
    • 0141515750 scopus 로고    scopus 로고
    • Prediction of protein subcellular locations by support vector machines using compositions of amino acids and amino acid pairs
    • Park KJ, Kanehisa M: Prediction of protein subcellular locations by support vector machines using compositions of amino acids and amino acid pairs. Bioinformatics 2003, 19(13):1656-1663.
    • (2003) Bioinformatics , vol.19 , Issue.13 , pp. 1656-1663
    • Park, K.J.1    Kanehisa, M.2
  • 2
    • 0345305854 scopus 로고    scopus 로고
    • Prediction and classification of protein subcellular location-sequence-order effect and pseudo amino acid composition
    • Chou KC, Cai YD: Prediction and classification of protein subcellular location-sequence-order effect and pseudo amino acid composition. J Cell Biochem 2003, 90(6):1250-1260.
    • (2003) J Cell Biochem , vol.90 , Issue.6 , pp. 1250-1260
    • Chou, K.C.1    Cai, Y.D.2
  • 4
    • 0032212323 scopus 로고    scopus 로고
    • Automated recognition of patterns characteristic of subcellular structures in fluorescence microscopy images
    • Boland MV, Markey MK, Murphy RF: Automated recognition of patterns characteristic of subcellular structures in fluorescence microscopy images. Cytometry 1998, 33(3):366-375.
    • (1998) Cytometry , vol.33 , Issue.3 , pp. 366-375
    • Boland, M.V.1    Markey, M.K.2    Murphy, R.F.3
  • 5
    • 0034564140 scopus 로고    scopus 로고
    • Towards a Systematics for Protein Subcellular Location: Quantitative Description of Protein Localization Patterns and Automated Analysis of Fluorescence Microscope Images
    • Murphy RF, Boland MV, Velliste M: Towards a Systematics for Protein Subcellular Location: Quantitative Description of Protein Localization Patterns and Automated Analysis of Fluorescence Microscope Images. Proc Int Conf Intell Syst Mol Biol 2000, 8:251-259.
    • (2000) Proc Int Conf Intell Syst Mol Biol , vol.8 , pp. 251-259
    • Murphy, R.F.1    Boland, M.V.2    Velliste, M.3
  • 6
    • 0036139314 scopus 로고    scopus 로고
    • A Neural Network Classifier Capable of Recognizing the Patterns of all Major Subcellular Structures in Fluorescence Microscope Images of HeLa Cells
    • Boland MV, Murphy RF: A Neural Network Classifier Capable of Recognizing the Patterns of all Major Subcellular Structures in Fluorescence Microscope Images of HeLa Cells. Bioinformatics 2001, 17(12):1213-1223.
    • (2001) Bioinformatics , vol.17 , Issue.12 , pp. 1213-1223
    • Boland, M.V.1    Murphy, R.F.2
  • 7
    • 15844414198 scopus 로고    scopus 로고
    • Objective Clustering of Proteins Based on Subcellular Location Patterns
    • Chen X, Murphy RF: Objective Clustering of Proteins Based on Subcellular Location Patterns. J Biomed Biotechnol 2005, 2005(2):87-95.
    • (2005) J Biomed Biotechnol , vol.2005 , Issue.2 , pp. 87-95
    • Chen, X.1    Murphy, R.F.2
  • 8
    • 0242410975 scopus 로고    scopus 로고
    • Location proteomics - Building subcellular location trees from high resolution 3D fluorescence microscope images of randomly-tagged proteins
    • San Jose, CA, U. S. A
    • Chen Y, Velliste M, Weinstein S, Jarvik JW, Murphy RF: Location proteomics - Building subcellular location trees from high resolution 3D fluorescence microscope images of randomly-tagged proteins. In Proc SPIE Volume 4962. San Jose, CA, U. S. A.; 2003:298-306.
    • (2003) Proc SPIE , vol.4962 , pp. 298-306
    • Chen, Y.1    Velliste, M.2    Weinstein, S.3    Jarvik, J.W.4    Murphy, R.F.5
  • 9
    • 0141921564 scopus 로고    scopus 로고
    • Robust Numerical Features for Description and Classification of Subcellular Location Patterns in Fluorescence Microscope Images
    • Murphy RF, Velliste M, Porreca G: Robust Numerical Features for Description and Classification of Subcellular Location Patterns in Fluorescence Microscope Images. J VLSI Sig Proc 2003, 35(3):311-321.
    • (2003) J VLSI Sig Proc , vol.35 , Issue.3 , pp. 311-321
    • Murphy, R.F.1    Velliste, M.2    Porreca, G.3
  • 10
    • 13344280993 scopus 로고    scopus 로고
    • Boosting Accuracy of Automated Classification of Fluorescence Microscope Images for Location Proteomics
    • Huang K, Murphy RF: Boosting Accuracy of Automated Classification of Fluorescence Microscope Images for Location Proteomics. BMC Bioinformatics 2004, 5:78.
    • (2004) BMC Bioinformatics , vol.5 , pp. 78
    • Huang, K.1    Murphy, R.F.2
  • 11
    • 11144321321 scopus 로고    scopus 로고
    • Robust Classification of Subcellular Location Patterns in High Resolution 3D Fluorescence Microscopy Images
    • San Francisco, CA
    • Chen X, Murphy RF: Robust Classification of Subcellular Location Patterns in High Resolution 3D Fluorescence Microscopy Images. In Proc 26th Ind Conf IEEE Eng Med Biol Soc San Francisco, CA; 2004:1632-1635.
    • (2004) Proc 26th Ind Conf IEEE Eng Med Biol Soc , pp. 1632-1635
    • Chen, X.1    Murphy, R.F.2
  • 14
    • 0038699587 scopus 로고    scopus 로고
    • Global protein function prediction from protein-protein interaction networks
    • Vazquez A, Flammini A, Maritan A, Vespignani A: Global protein function prediction from protein-protein interaction networks. Nat Biotechnol 2003, 21(6):697-700.
    • (2003) Nat Biotechnol , vol.21 , Issue.6 , pp. 697-700
    • Vazquez, A.1    Flammini, A.2    Maritan, A.3    Vespignani, A.4
  • 20
    • 30244555119 scopus 로고    scopus 로고
    • Inference in belief networks: A procedural guide
    • Huang C, Darwiche A: Inference in belief networks: a procedural guide. Int J Approximate Reasoning 1996, 15(3):225-263.
    • (1996) Int J Approximate Reasoning , vol.15 , Issue.3 , pp. 225-263
    • Huang, C.1    Darwiche, A.2
  • 23
    • 0001341735 scopus 로고    scopus 로고
    • Introduction to Monte Carlo methods
    • Cambridge, M, MIT Press
    • Mackay DJC: Introduction to Monte Carlo methods. In Learning in graphical models Cambridge, MA, MIT Press; 1998:175-204.
    • (1998) Learning in Graphical Models , pp. 175-204
    • Mackay, D.J.C.1
  • 27
    • 0036505670 scopus 로고    scopus 로고
    • A comparison of methods for multi-class support vector machines
    • Hsu CW, Lin CJ: A comparison of methods for multi-class support vector machines. IEEE Transactions on Neural Networks 2002, 13:415-425.
    • (2002) IEEE Transactions on Neural Networks , vol.13 , pp. 415-425
    • Hsu, C.W.1    Lin, C.J.2
  • 28
    • 0003243224 scopus 로고    scopus 로고
    • Probabilistic Outputs for Support Vector Machines and Comparisons to Regularized Likelihood Methods
    • MIT Press
    • Platt J: Probabilistic Outputs for Support Vector Machines and Comparisons to Regularized Likelihood Methods. Advances in Large Margin Classifiers, MIT Press 1999:61-74.
    • (1999) Advances in Large Margin Classifiers , pp. 61-74
    • Platt, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.