메뉴 건너뛰기




Volumn 5, Issue 7, 2006, Pages 1555-1567

Parallel analysis of transcript and translation profiles: Identification of metastasis-related signal pathways differentially regulated by drug and genetic modifications

Author keywords

Biological association network; Isotope coded affinity tag; Metastasis; Microarray; Signaling pathway; Systems biology

Indexed keywords

CAFFEINE; STAT5 PROTEIN;

EID: 33745823914     PISSN: 15353893     EISSN: None     Source Type: Journal    
DOI: 10.1021/pr0504283     Document Type: Article
Times cited : (10)

References (42)
  • 1
    • 0000289388 scopus 로고
    • Principles of molecular cell biology of cancer: Cancer metastasis
    • DeVita, S. H. V., Rosenberg, S. A., Eds.; Lippincott Co.: Philadelphia, PA
    • Liotta, L. A.; Stetler-Stevenson, W. G. Principles of molecular cell biology of cancer: Cancer metastasis. In Cancer: Principles & Practice of Oncology, 4th ed.; DeVita, S. H. V., Rosenberg, S. A., Eds.; Lippincott Co.: Philadelphia, PA, 1993; pp 134-149.
    • (1993) Cancer: Principles & Practice of Oncology, 4th Ed. , pp. 134-149
    • Liotta, L.A.1    Stetler-Stevenson, W.G.2
  • 2
    • 0033661871 scopus 로고    scopus 로고
    • Use of CA15-3, CEA, and prolactin for the primary diagnosis of breast cancer and correlation with the prognostic factors at the time of initial diagnosis
    • Arslan, N.; Serdar, M.; Deveci, S. et al. Use of CA15-3, CEA, and prolactin for the primary diagnosis of breast cancer and correlation with the prognostic factors at the time of initial diagnosis. Ann. Nucl. Med. 2000, 14, 395-399.
    • (2000) Ann. Nucl. Med. , vol.14 , pp. 395-399
    • Arslan, N.1    Serdar, M.2    Deveci, S.3
  • 3
    • 0032535536 scopus 로고    scopus 로고
    • Correlation of tumor size and axillary lymph node involvement with prognosis in patients with T1 breast carcinoma
    • Abner, A. L.; Collins, L.; Peiro, G. et al. Correlation of tumor size and axillary lymph node involvement with prognosis in patients with T1 breast carcinoma. Cancer 1998, 83, 2502-2508.
    • (1998) Cancer , vol.83 , pp. 2502-2508
    • Abner, A.L.1    Collins, L.2    Peiro, G.3
  • 4
    • 17144469968 scopus 로고
    • Preclinical models for the evaluation of targeted therapies of metastatic disease
    • Eccles, S. A.; Box, G.; Court, W.; Sandle, J.; Dean, C. J. Preclinical models for the evaluation of targeted therapies of metastatic disease. Cell. Biophys. 1994, 24-25, 279-291.
    • (1994) Cell. Biophys. , vol.24-25 , pp. 279-291
    • Eccles, S.A.1    Box, G.2    Court, W.3    Sandle, J.4    Dean, C.J.5
  • 5
    • 0022377328 scopus 로고
    • Harvey ras induction of metastatic potential depends on oncogene activation and the type of recipient cell
    • Muschel, R. J.; Williams, J. E.; Lowy, D. R.; Liotta, L. A. Harvey ras induction of metastatic potential depends on oncogene activation and the type of recipient cell. Am. J. Pathol. 1985, 121, 1-8.
    • (1985) Am. J. Pathol. , vol.121 , pp. 1-8
    • Muschel, R.J.1    Williams, J.E.2    Lowy, D.R.3    Liotta, L.A.4
  • 6
    • 0035893391 scopus 로고    scopus 로고
    • Predisposition to efficient mammary tumor metastatic progression is linked to the breast cancer metastasis suppressor gene Brms1
    • Hunter, K. W.; Broman, K. W.; Voyer, T. L. et al. Predisposition to Efficient Mammary Tumor Metastatic Progression Is Linked to the Breast Cancer Metastasis Suppressor Gene Brms1. Cancer Res. 2001, 61, 8866-8872.
    • (2001) Cancer Res. , vol.61 , pp. 8866-8872
    • Hunter, K.W.1    Broman, K.W.2    Voyer, T.L.3
  • 7
    • 19944401861 scopus 로고    scopus 로고
    • Caffeine suppresses metastasis in a transgenic mouse model: A prototype molecule for prophylaxis of metastasis
    • Yang, H.; Rouse, J.; Lukes, L. et al. Caffeine suppresses metastasis in a transgenic mouse model: a prototype molecule for prophylaxis of metastasis. Clin. Exp. Metastasis 2005, 21, 719-735.
    • (2005) Clin. Exp. Metastasis , vol.21 , pp. 719-735
    • Yang, H.1    Rouse, J.2    Lukes, L.3
  • 8
    • 0035931947 scopus 로고    scopus 로고
    • Gene-expression profiles in hereditary breast cancer
    • Hedenfalk, I.; Duggan, D.; Chen, Y. et al. Gene-Expression Profiles in Hereditary Breast Cancer. N. Engl. J. Med. 2001, 344, 539-548.
    • (2001) N. Engl. J. Med. , vol.344 , pp. 539-548
    • Hedenfalk, I.1    Duggan, D.2    Chen, Y.3
  • 9
    • 0034088857 scopus 로고    scopus 로고
    • A gene expression database for the molecular pharmacology of cancer
    • Scherf, U.; Ross, D. T.; Waltham, M. et al. A gene expression database for the molecular pharmacology of cancer. Nat. Genet. 2000, 24, 236-244.
    • (2000) Nat. Genet. , vol.24 , pp. 236-244
    • Scherf, U.1    Ross, D.T.2    Waltham, M.3
  • 12
    • 0348143180 scopus 로고    scopus 로고
    • A random variance model for detection of differential gene expression in small microarray experiments
    • Wright, G. W.; Simon, R. M. A random variance model for detection of differential gene expression in small microarray experiments. Bioinformatics 2003, 19, 2448-2455.
    • (2003) Bioinformatics , vol.19 , pp. 2448-2455
    • Wright, G.W.1    Simon, R.M.2
  • 13
    • 4444281105 scopus 로고    scopus 로고
    • Evaluation of the acid-cleavable isotope-coded affinity tag reagents: Application to camptothecin-treated cortical neurons
    • Yu, L. R.; Conrads, T. P.; Uo, T. et al. Evaluation of the acid-cleavable isotope-coded affinity tag reagents: application to camptothecin-treated cortical neurons. J. Proteome Res. 2004, 3, 469-477.
    • (2004) J. Proteome Res. , vol.3 , pp. 469-477
    • Yu, L.R.1    Conrads, T.P.2    Uo, T.3
  • 14
    • 0033808727 scopus 로고    scopus 로고
    • An epistatic interaction controls the latency of a transgene-induced mammary tumor
    • Le Voyer, T.; Lu, Z.; Babb, J. et al. An epistatic interaction controls the latency of a transgene-induced mammary tumor. Mamm. Genome 2000, 11, 883-889.
    • (2000) Mamm. Genome , vol.11 , pp. 883-889
    • Le Voyer, T.1    Lu, Z.2    Babb, J.3
  • 15
    • 0036856374 scopus 로고    scopus 로고
    • Methods for assessing reproducibility of clustering patterns observed in analyses of microarray data
    • McShane, L. M.; Radmacher, M. D.; Freidlin, B. et al. Methods for assessing reproducibility of clustering patterns observed in analyses of microarray data. Bioinformatics 2002, 18, 1462-1469.
    • (2002) Bioinformatics , vol.18 , pp. 1462-1469
    • McShane, L.M.1    Radmacher, M.D.2    Freidlin, B.3
  • 16
    • 18244409687 scopus 로고    scopus 로고
    • Gene expression profiling predicts clinical outcome of breast cancer
    • van't Veer, L. J.; Dai, H.; van de Vijver, M. J. et al. Gene expression profiling predicts clinical outcome of breast cancer. Nature (London) 2002, 415, 530-536.
    • (2002) Nature (London) , vol.415 , pp. 530-536
    • Van't Veer, L.J.1    Dai, H.2    Van De Vijver, M.J.3
  • 17
    • 20144372603 scopus 로고    scopus 로고
    • Effectiveness of gene expression profiling for response prediction of rectal adenocarcinomas to preoperative chemoradiotherapy
    • Ghadimi, B. M.; Grade, M.; Difilippantonio, M. J. et al. Effectiveness of gene expression profiling for response prediction of rectal adenocarcinomas to preoperative chemoradiotherapy. J. Clin. Oncol. 2005, 23, 1826-1838.
    • (2005) J. Clin. Oncol. , vol.23 , pp. 1826-1838
    • Ghadimi, B.M.1    Grade, M.2    Difilippantonio, M.J.3
  • 18
    • 15544384884 scopus 로고    scopus 로고
    • Gene expression profiling of breast cancer, a new tumor marker
    • van't Veer, L. J.; Paik, S.; Hayes, D. F. Gene expression profiling of breast cancer, a new tumor marker. J. Clin. Oncol. 2005, 23, 1631-1635.
    • (2005) J. Clin. Oncol. , vol.23 , pp. 1631-1635
    • Van't Veer, L.J.1    Paik, S.2    Hayes, D.F.3
  • 19
    • 20144387214 scopus 로고    scopus 로고
    • An expression signature classifies chemotherapy-resistant pediatric osteosarcoma
    • Mintz, M. B.; Sowers, R.; Brown, K. M. et al. An expression signature classifies chemotherapy-resistant pediatric osteosarcoma. Cancer Res. 2005, 65, 1748-1754.
    • (2005) Cancer Res. , vol.65 , pp. 1748-1754
    • Mintz, M.B.1    Sowers, R.2    Brown, K.M.3
  • 20
    • 0037226593 scopus 로고    scopus 로고
    • A molecular signature of metastasis in primary solid tumors
    • Ramaswamy, S.; Ross, K. N.; Lander, E. S.; Golub, T. R. A molecular signature of metastasis in primary solid tumors. Nat. Genet. 2003, 33, 49-54.
    • (2003) Nat. Genet. , vol.33 , pp. 49-54
    • Ramaswamy, S.1    Ross, K.N.2    Lander, E.S.3    Golub, T.R.4
  • 21
    • 12144286892 scopus 로고    scopus 로고
    • Differential gene and protein expression in primary breast malignancies and their lymph node metastases as revealed by combined cDNA microarray and tissue microarray analysis
    • Hao, X.; Sun, B.; Hu, L. et al. Differential gene and protein expression in primary breast malignancies and their lymph node metastases as revealed by combined cDNA microarray and tissue microarray analysis. Cancer 2004, 100, 1110-1122.
    • (2004) Cancer , vol.100 , pp. 1110-1122
    • Hao, X.1    Sun, B.2    Hu, L.3
  • 22
    • 19944432209 scopus 로고    scopus 로고
    • Genomic analysis of a spontaneous model of breast cancer metastasis to bone reveals a role for the extracellular matrix
    • Eckhardt, B. L.; Parker, B. S.; van Laar, R. K. et al. Genomic analysis of a spontaneous model of breast cancer metastasis to bone reveals a role for the extracellular matrix. Mol. Cancer Res. 2005, 3, 1-13.
    • (2005) Mol. Cancer Res. , vol.3 , pp. 1-13
    • Eckhardt, B.L.1    Parker, B.S.2    Van Laar, R.K.3
  • 23
    • 0038709289 scopus 로고    scopus 로고
    • Clinical significance of secreted protein acidic and rich in cystein in esophageal carcinoma and its relation to carcinoma progression
    • Yamashita, K.; Upadhay, S.; Mimori, K.; Inoue, H.; Mori, M. Clinical significance of secreted protein acidic and rich in cystein in esophageal carcinoma and its relation to carcinoma progression. Cancer 2003, 97, 2412-2419.
    • (2003) Cancer , vol.97 , pp. 2412-2419
    • Yamashita, K.1    Upadhay, S.2    Mimori, K.3    Inoue, H.4    Mori, M.5
  • 24
    • 0032401846 scopus 로고    scopus 로고
    • SPARC/osteonectin induces matrix metalloproteinase 2 activation in human breast cancer cell lines
    • Gilles, C.; Bassuk, J. A.; Pulyaeva, H. et al. SPARC/osteonectin induces matrix metalloproteinase 2 activation in human breast cancer cell lines. Cancer Res. 1998, 58, 5529-5536.
    • (1998) Cancer Res. , vol.58 , pp. 5529-5536
    • Gilles, C.1    Bassuk, J.A.2    Pulyaeva, H.3
  • 25
    • 0034696171 scopus 로고    scopus 로고
    • Signal transduction in mammary tumorigenesis: A transgenic perspective
    • Dankort, D. L.; Muller, W. J. Signal transduction in mammary tumorigenesis: a transgenic perspective. Oncogene 2000, 19, 1038-1044.
    • (2000) Oncogene , vol.19 , pp. 1038-1044
    • Dankort, D.L.1    Muller, W.J.2
  • 26
    • 0031823908 scopus 로고    scopus 로고
    • Identification of inbred mouse strains harboring genetic modifiers of mammary tumor age of onset and metastatic progression
    • Lifsted, T.; Le Voyer, T.; Williams, M et al. Identification of inbred mouse strains harboring genetic modifiers of mammary tumor age of onset and metastatic progression. Int. J. Cancer 1998, 77, 640-644.
    • (1998) Int. J. Cancer , vol.77 , pp. 640-644
    • Lifsted, T.1    Le Voyer, T.2    Williams, M.3
  • 27
    • 0035907240 scopus 로고    scopus 로고
    • Identification of novel TGF-beta/Smad gene targets in dermal fibroblasts using a combined cDNA microarray/promoter transactivation approach
    • Verrecchia, F.; Chu, M. L.; Mauviel, A. Identification of novel TGF-beta/Smad gene targets in dermal fibroblasts using a combined cDNA microarray/promoter transactivation approach. J. Biol. Chem. 2001, 276, 17058-17062.
    • (2001) J. Biol. Chem. , vol.276 , pp. 17058-17062
    • Verrecchia, F.1    Chu, M.L.2    Mauviel, A.3
  • 28
    • 0035923521 scopus 로고    scopus 로고
    • Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses
    • Bhattacharjee, A.; Richards, W. G.; Staunton, J. et al. Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses. Proc. Natl. Acad. Sci. U.S.A. 2001, 98, 13790-13795.
    • (2001) Proc. Natl. Acad. Sci. U.S.A. , vol.98 , pp. 13790-13795
    • Bhattacharjee, A.1    Richards, W.G.2    Staunton, J.3
  • 29
    • 0037069942 scopus 로고    scopus 로고
    • Inhibition of Bcr-Abl kinase activity by PD180970 blocks constitutive activation of Stat5 and growth of CML cells
    • Huang, M.; Dorsey, J. F.; Epling-Burnette, P. K. et al. Inhibition of Bcr-Abl kinase activity by PD180970 blocks constitutive activation of Stat5 and growth of CML cells. Oncogene 2002, 21, 8804-8816.
    • (2002) Oncogene , vol.21 , pp. 8804-8816
    • Huang, M.1    Dorsey, J.F.2    Epling-Burnette, P.K.3
  • 30
    • 0035203382 scopus 로고    scopus 로고
    • Regulation of constitutive STAT5 phosphorylation in acute myeloid leukemia blasts
    • Birkenkamp, K. U.; Geugien, M.; Lemmink, H. H.; Kruijer, W.; Vellenga, E. Regulation of constitutive STAT5 phosphorylation in acute myeloid leukemia blasts. Leukemia 2001, 15, 1923-1931.
    • (2001) Leukemia , vol.15 , pp. 1923-1931
    • Birkenkamp, K.U.1    Geugien, M.2    Lemmink, H.H.3    Kruijer, W.4    Vellenga, E.5
  • 31
    • 3142707259 scopus 로고    scopus 로고
    • Activation of signal transducer and activator of transcription 5 in human prostate cancer is associated with high histological grade
    • Li, H.; Ahonen, T. J.; Alanen, K. et al. Activation of signal transducer and activator of transcription 5 in human prostate cancer is associated with high histological grade. Cancer Res. 2004, 64, 4774-4782.
    • (2004) Cancer Res. , vol.64 , pp. 4774-4782
    • Li, H.1    Ahonen, T.J.2    Alanen, K.3
  • 32
    • 0347951248 scopus 로고    scopus 로고
    • Activation of signal transducer and activator of transcription 5 is required for progression of autochthonous prostate cancer: Evidence from the transgenic adenocarcinoma of the mouse prostate system
    • Kazansky, A. V.; Spencer, D. M.; Greenberg, N. M. Activation of signal transducer and activator of transcription 5 is required for progression of autochthonous prostate cancer: evidence from the transgenic adenocarcinoma of the mouse prostate system. Cancer Res. 2003, 63, 8757-8762.
    • (2003) Cancer Res. , vol.63 , pp. 8757-8762
    • Kazansky, A.V.1    Spencer, D.M.2    Greenberg, N.M.3
  • 33
    • 0032540383 scopus 로고    scopus 로고
    • Regulation of mammary differentiation by extracellular matrix involves protein-tyrosine phosphatases
    • Edwards, G. M.; Wilford, F. H.; Liu, X. et al. Regulation of Mammary Differentiation by Extracellular Matrix Involves Protein-tyrosine Phosphatases. J. Biol. Chem. 1998, 273, 9495-9500.
    • (1998) J. Biol. Chem. , vol.273 , pp. 9495-9500
    • Edwards, G.M.1    Wilford, F.H.2    Liu, X.3
  • 34
    • 1042302005 scopus 로고    scopus 로고
    • The STATs of cancer-new molecular targets come of age
    • Yu, H.; Jove, R. The STATs of cancer-new molecular targets come of age. Nat. Rev. Cancer 2004, 4, 97-105.
    • (2004) Nat. Rev. Cancer , vol.4 , pp. 97-105
    • Yu, H.1    Jove, R.2
  • 35
    • 0036793979 scopus 로고    scopus 로고
    • Prognostic significance of signal transducer and activator of transcription 1 activation in breast cancer
    • Widschwendter, A.; Tonko-Geymayer, S.; Weite, T. et al. Prognostic significance of signal transducer and activator of transcription 1 activation in breast cancer. Clin. Cancer Res. 2002, 8, 3065-3074.
    • (2002) Clin. Cancer Res. , vol.8 , pp. 3065-3074
    • Widschwendter, A.1    Tonko-Geymayer, S.2    Weite, T.3
  • 36
    • 8544281698 scopus 로고    scopus 로고
    • STAT1: A modulator of chemotherapy-induced apoptosis
    • Thomas, M.; Finnegan, C. E.; Rogers, K. M. A. et al. STAT1: A Modulator of Chemotherapy-induced Apoptosis. Cancer Res. 2004, 64, 8357-8364.
    • (2004) Cancer Res. , vol.64 , pp. 8357-8364
    • Thomas, M.1    Finnegan, C.E.2    Rogers, K.M.A.3
  • 37
    • 0037020224 scopus 로고    scopus 로고
    • Direct effects of caffeine and theophylline on p110 delta and other phosphoinositide 3-kinases. Differential effects on lipid kinase and protein kinase activities
    • Foukas, L. C.; Daniele, N.; Ktori, C. et al. Direct effects of caffeine and theophylline on p110 delta and other phosphoinositide 3-kinases. Differential effects on lipid kinase and protein kinase activities. J. Biol. Chem. 2002, 277, 37124-37130.
    • (2002) J. Biol. Chem. , vol.277 , pp. 37124-37130
    • Foukas, L.C.1    Daniele, N.2    Ktori, C.3
  • 39
    • 0035008874 scopus 로고    scopus 로고
    • Activation of Akt (protein kinase B) in mammary epithelium provides a critical cell survival signal required for tumor progression
    • Hutchinson, J.; Jin, J.; Cardiff, R. D.; Woodgett, J. R.; Muller, W. J. Activation of Akt (protein kinase B) in mammary epithelium provides a critical cell survival signal required for tumor progression. Mol. Cell. Biol. 2001, 21, 2203-2212.
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 2203-2212
    • Hutchinson, J.1    Jin, J.2    Cardiff, R.D.3    Woodgett, J.R.4    Muller, W.J.5
  • 40
    • 0034020459 scopus 로고    scopus 로고
    • Combined activation of Ras and Akt in neural progenitors induces glioblastoma formation in mice
    • Holland, E. C.; Celestino, J.; Dai, C. et al. Combined activation of Ras and Akt in neural progenitors induces glioblastoma formation in mice. Nat. Genet. 2000, 25, 55-57.
    • (2000) Nat. Genet. , vol.25 , pp. 55-57
    • Holland, E.C.1    Celestino, J.2    Dai, C.3
  • 41
    • 18244391514 scopus 로고    scopus 로고
    • Activation of AKT/PKB in breast cancer predicts a worse outcome among endocrine treated patients
    • Perez-Tenorio, G.; Stal, O. Activation of AKT/PKB in breast cancer predicts a worse outcome among endocrine treated patients. Br. J. Cancer 2002, 86, 540-545.
    • (2002) Br. J. Cancer , vol.86 , pp. 540-545
    • Perez-Tenorio, G.1    Stal, O.2
  • 42
    • 2342527930 scopus 로고    scopus 로고
    • Activation of Akt-1 (PKB-alpha) can accelerate ErbB-2-mediated mammary tumorigenesis but suppresses tumor invasion
    • Hutchinson, J. N.; Jin, J.; Cardiff, R. D.; Woodgett, J. R.; Muller, W. J. Activation of Akt-1 (PKB-alpha) can accelerate ErbB-2-mediated mammary tumorigenesis but suppresses tumor invasion. Cancer Res. 2004, 64, 3171-3178.
    • (2004) Cancer Res. , vol.64 , pp. 3171-3178
    • Hutchinson, J.N.1    Jin, J.2    Cardiff, R.D.3    Woodgett, J.R.4    Muller, W.J.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.