Association between SLC11A1 polymorphisms and susceptibility to different clinical forms of tuberculosis in the Peruvian population

Infection, Genetics and Evolution

Volumn 6, Issue 5, 2006, Pages 361-367

  Taype, C A ^a,b,c   Castro, J C ^a   Accinelli, R A ^b   Herrera Velit, P ^a   Shaw, M A ^c   Espinoza, J R ^a,d  

^a Faculty of Science and Philosophy   (Peru)

^b Laboratory of Respiration   (Peru)

^c UNIVERSITY OF LEEDS   (United Kingdom)

^d INSTITUTO PERUANO DE ENERGÍA NUCLEAR   (Peru)

Author keywords

Allelic association; Miliary; Pleural; Pulmonary; SLC11A1; Tuberculosis

Indexed keywords

NATURAL RESISTANCE ASSOCIATED MACROPHAGE PROTEIN 1; SOLUTE CARRIER FAMILY 11 MEMBER A1 PROTEIN; UNCLASSIFIED DRUG;

3' UNTRANSLATED REGION; ADULT; ALLELE; ARTICLE; CONTROLLED STUDY; EXTRAPULMONARY TUBERCULOSIS; GENE FREQUENCY; GENETIC ASSOCIATION; GENETIC POLYMORPHISM; GENETIC SUSCEPTIBILITY; GENOTYPE; HAPLOTYPE; HUMAN; INFECTION SENSITIVITY; INTRON; LUNG TUBERCULOSIS; MAJOR CLINICAL STUDY; MILIARY TUBERCULOSIS; PERU; POPULATION GENETICS; PRIORITY JOURNAL; TUBERCULOSIS; TUBERCULOUS PLEURISY;

ADOLESCENT; ADULT; CATION TRANSPORT PROTEINS; GENETIC PREDISPOSITION TO DISEASE; GENOTYPE; HAPLOTYPES; HUMANS; MALE; PERU; POLYMORPHISM, GENETIC; TUBERCULOSIS, PULMONARY;

EID: 33745374953     PISSN: 15671348     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.meegid.2006.01.002     Document Type: Article

References (38)

1. Abe T., Iinuma Y., Ando M., Yokoyama T., Yamamoto T., Nakashima K., Takagi N., Baba H., Hasegawa Y., and Shimokata K. NRAMP1 polymorphisms, susceptibility and clinical features of tuberculosis. J. Infect. Dis. 46 (2003) 215-220
2. Bellamy R., Ruwende C., Corrah T., McAdam K.P., Whittle H.C., and Hill A.V. Assessment of the interleukin 1 gene cluster and other candidate gene polymorphisms in host susceptibility to tuberculosis. Tuberc. Lung Dis. 79 (1998) 83-89
3. Bellamy R., Ruwende C., Corrah T., McAdam K.P., Whittle H.C., and Hill A.V. Variations in the NRAMP1 gene and susceptibility to tuberculosis in West Africans. N. Engl. J. Med. 338 (1998) 640-644
4. Bellamy R., Ruwende C., Corrah T., McAdam K.P., Thursz M., Whittle H.C., and Hill A.V. Tuberculosis and chronic hepatitis B virus infection in Africans and variation in the Vitamin D receptor gene. J. Infect. Dis. 179 (1999) 714-721
5. Blackwell J.M., Searle S., Mohamed H., and White J.K. Divalent cation transport and susceptibility to infectious and autoimmune disease: continuation of the Ity/Lsh/Bcg/NRAMP1/SLC11A1 gene story. Immunol. Lett. 85 (2003) 197-203
6. Bornman L., Campbell S.J., Fielding K., Bah B., Sillah J., Gustafson P., Manneh K., Lisse I., Allen A., Sirugo G., Sylla A., Aaby P., McAdam K.P., Bah-Sow O., Bennett S., Lienhardt C., and Hill A.V. Vitamin D receptor polymorphisms and susceptibility to tuberculosis in West Africa: a case-control and family study. J. Infect. Dis. 190 (2004) 1631-1641
7. Cervino A.C., Lakiss S., Sow O., and Hill A.V. Allelic association between the NRAMP1 gene and susceptibility to tuberculosis in Guinea-Conakry. Ann. Hum. Genet. 64 (2000) 507-512
8. Corbett E.L., Watt C.J., Walker N., Maher D., Williams B.G., Raviglione M.C., and Dye C. The growing burden of tuberculosis: global trends and interactions with the HIV epidemic. Arch. Intern. Med. 163 (2003) 1009-1021
9. Delgado J.C., Baena A., Thim S., and Goldfeld A.E. Ethnic-specific genetic associations with pulmonary tuberculosis. J. Infect. Dis. 186 (2002) 1463-1468
10. Dolin P.J., Raviglione M.C., and Kochi A. Global tuberculosis incidence and mortality during 1990-2000. Bull. WHO 72 (1994) 213-220
11. Dubaniewicz A., Moszkowska G., Szczerkowska Z., and Hoppe A. Analysis of DQB1 allele frequencies in pulmonary tuberculosis: preliminary report. Thorax 58 (2003) 890-891
12. Dye C., Scheele S., Dolin P., Pathania V., and Raviglione M.C. Consensus statement. Global burden of tuberculosis: estimated incidence, prevalence, and mortality by country. WHO Global Surveillance and Monitoring Project. JAMA 282 (1999) 677-686
13. El Baghdadi J., Remus N., Benslimane A., El Annaz H., Chentoufi M., Abel L., and Schurr E. Variants of the human NRAMP1 gene and susceptibility to tuberculosis in Morocco. Int. J. Tuberc. Lung Dis. 7 (2003) 599-602
14. Fitness J., Floyd S., Warndorff D.K., Sichali L., Malema S., Crampin A.C., Fine P.E., and Hill A.V. Large-scale candidate gene study of tuberculosis susceptibility in the Karonga district of northern Malawi. Am. J. Trop. Med. Hyg. 71 (2004) 341-349
15. Gao P.S., Fujishima S., Mao X.Q., Remus N., Kanda M., Enomoto T., Dake Y., Bottini N., Tabuchi M., Hasegawa N., Yamaguchi K., Tiemessen C., Hopkin J.M., Shirakawa T., and Kishi F. Genetic variants of NRAMP1 and active tuberculosis in Japanese populations. International Tuberculosis Genetics Team. Clin. Genet. 58 (2000) 74-76
16. Goldfeld A.E., Delgado J.C., Thim S., Bozon M.V., Uglialoro A.M., Turbay D., Cohen C., and Yunis E.J. Association of an HLA-DQ allele with clinical tuberculosis. JAMA 279 (1998) 226-228
17. Goswami T., Bhattacharjee A., Babal P., Searle S., Moore E., Li M., and Blackwell J.M. Natural-resistance-associated macrophage protein 1 is an H+/bivalent cation antiporter. Biochem J. 354 (2001) 511-519
18. Greenwood C.M., Fujiwara T.M., Boothroyd L.J., Miller M.A., Frappier D., Fanning E.A., Schurr E., and Morgan K. Linkage of tuberculosis to chromosome 2q35 loci, including NRAMP1, in a large aboriginal Canadian family. Am. J. Hum. Genet. 67 (2000) 405-416
19. Hoal E.G., Lewis L.A., Jamieson S.E., Tanzer F., Rossouw M., Victor T., Hillerman R., Beyers N., Blackwell J.M., and Van Helden P.D. SLC11A1 (NRAMP1) but not SLC11A2 (NRAMP2) polymorphisms are associated with susceptibility to tuberculosis in a high-incidence community in South Africa. Int. J. Tuberc. Lung Dis. 8 (2004) 1464-1471
20. Kim J.H., Lee S.Y., Lee S.H., et al. NRAMP1 genetic polymorphisms as a risk factor of tuberculous pleurisy. Int. J. Tuberc. Lung Dis. 7 (2003) 370-375
21. Liaw Y.S., Tsai-Wu J.J., Wu C.H., Hung C.C., Lee C.N., Yang P.C., Luh K.T., and Kuo S.H. Variations in the NRAMP1 gene and susceptibility of tuberculosis in Taiwanese. Int. J. Tuberc. Lung Dis. 6 (2002) 454-460
22. Lio D., Marino V., Serauto A., Gioia V., Scola L., Crivello A., Forte G.I., Colonna-Romano G., Candore G., and Caruso C. Genotype frequencies of the +874T → A single nucleotide polymorphism in the first intron of the interferon-gamma gene in a sample of Sicilian patients affected by tuberculosis. Eur. J. Immunogenet. 29 (2002) 371-374
23. Liu J., Fujiwara T.M., Buu N.T., Sanchez F.O., Cellier M., Paradis A.J., Frappier D., Skamene E., Gros P., Morgan K., and Schurr E. Identification of polymorphisms and sequence variants in the human homologue of the mouse natural resistance-associated macrophage protein gene. Am. J. Hum. Genet. 56 (1995) 553-845
24. Liu W., Cao W.C., Zhang C.Y., Tian L., Wu X.M., Habbema J.D., Zhao Q.M., Zhang P.H., Xin Z.T., Li C.Z., and Yang H. VDR and NRAMP1 gene polymorphisms in susceptibility to pulmonary tuberculosis among the Chinese Han population: a case-control study. Int. J. Tuberc. Lung Dis. 8 (2004) 428-434
25. Lopez-Maderuelo D., Arnalich F., Serantes R., Gonzalez A., Codoceo R., Madero R., Vazquez J.J., and Montiel C. Interferon-gamma and interleukin-10 gene polymorphisms in pulmonary tuberculosis. Am. J. Respir. Crit. Care Med. 167 (2003) 970-975
26. Meyer C.G., May J., and Stark K. Human leukocyte antigens in tuberculosis and leprosy. Trends Microbiol. 6 (1998) 148-154
27. Ministerio de Salud. Tuberculosis en el Perú: informe 1999 (2000), Dirección General de Salud de las Personas-Programa de Control de la Tuberculosism, Lima, Perú
28. Ministerio de Salud. Tuberculosis en el Perú: informe 2003 (2004), Dirección General de Salud de las Personas-Programa de Control de la Tuberculosis, Lima, Perú
29. Ott, J., 2003. User's Guide to the EH program (http://www.linkage.rockefeller.edu/ott/eh.htm).
30. Puzyrev V.P., Freidin M.B., Rudko A.A., Strelis A.K., and Kolokolova O.V. Polymorphisms of the candidate genes for genetic susceptibility to tuberculosis in the Slavic population of Siberia: a pilot study. Mol. Biol. (Mosk) 36 (2002) 788-891
31. Ravikumar M., Dheenadhayalan V., Rajaram K., Lakshmi S.S., Kumaran P.P., Paramasivan C.N., Balakrishnan K., and Pitchappan R.M. Associations of HLA-DRB1, DQB1 and DPB1 alleles with pulmonary tuberculosis in south India. Tuberc. Lung Dis. 79 (1999) 309-317
32. Ryu S., Park Y.K., Bai G.H., Kim S.J., Park S.N., and Kang S. 3′UTR polymorphisms in the NRAMP1 gene are associated with susceptibility to tuberculosis in Koreans. Int. J. Tuberc. Lung Dis. 4 (2000) 577-580
33. Selvaraj P., Sriram U., Mathan Kurian S., Reetha A.M., and Narayanan P.R. Tumour necrosis factor alpha (-238 and -308) and beta gene polymorphisms in pulmonary tuberculosis: haplotype analysis with HLA-A, B and DR genes. Tuberculosis (Edinburgh) 81 (2001) 335-341
34. Tso H.W., Lau Y.L., Tam C.M., Wong H.S., and Chiang A.K. Associations between IL12B polymorphisms and tuberculosis in the Hong Kong Chinese population. J. Infect. Dis. 190 (2004) 913-919
35. Vigil, P.L., 1991. Tuberculosis no pulmonar. MD Thesis. Universidad Peruana Cayetano Heredia, Lima, Peru.
36. Wilkinson R.J., Patel P., Llewelyn M., Hirsch C.S., Pasvol G., Snounou G., Davidson R.N., and Toossi Z. Influence of polymorphism in the genes for the interleukin (IL)-1 receptor antagonist and IL-1beta on tuberculosis. J. Exp. Med. 189 (1999) 1863-1874
37. Zhang W., Shao L., Weng X., Hu Z., Jin A., Chen S., Pang M., and Chen Z.W. Variants of the natural resistance-associated macrophage protein 1 gene (NRAMP1) are associated with severe forms of pulmonary tuberculosis. Clin. Infect. Dis. 40 (2005) 1232-1236
38. Zhao, J.H., 2002. 2LD two locus LD calculator (http://www.hgmp.mrc.ac.uk/∼jzhao/software/2ld.htm).