-
1
-
-
33745032151
-
-
World Health Organization: Malaria
-
World Health Organization: Malaria [http://www.who.int/tdr/diseases/malaria]
-
-
-
-
3
-
-
0031586003
-
Prediction of complete gene structures in human genomic DNA
-
Burge C. Karlin S: Prediction of complete gene structures in human genomic DNA. J Mol Biol 1997, 268:78-94.
-
(1997)
J Mol Biol
, vol.268
, pp. 78-94
-
-
Burge, C.1
Karlin, S.2
-
4
-
-
0028696343
-
Characteristic features of the nucleotide sequences of yeast mitochondrial ribosomal protein genes as analyzed by computer program GeneMark
-
Isono K, Mcininch JD, Borodovsky M: Characteristic features of the nucleotide sequences of yeast mitochondrial ribosomal protein genes as analyzed by computer program GeneMark. DNA Res 1994, 1:263-269.
-
(1994)
DNA Res
, vol.1
, pp. 263-269
-
-
Isono, K.1
Mcininch, J.D.2
Borodovsky, M.3
-
5
-
-
2942544417
-
Gene finding in novel genomes
-
Korf I: Gene finding in novel genomes. Bmc Bioinformatics 2004, 5:59.
-
(2004)
Bmc Bioinformatics
, vol.5
, pp. 59
-
-
Korf, I.1
-
6
-
-
21844435662
-
AnoEST: Toward A. gambiae functional genomics
-
Kriventseva EV, Koutsos AC, Blass C, Kafatos FC, Christophides GK, Zdobnov EM: AnoEST: toward A. gambiae functional genomics. Genome Res 2005, 15:893-899.
-
(2005)
Genome Res
, vol.15
, pp. 893-899
-
-
Kriventseva, E.V.1
Koutsos, A.C.2
Blass, C.3
Kafatos, F.C.4
Christophides, G.K.5
Zdobnov, E.M.6
-
7
-
-
22544437254
-
Pilot Anopheles gambiae full-length cDNA study: Sequencing and initial characterization of 35,575 clones
-
Gomez S, Eiglmeier K, Segurens B, Dehoux P, Couloux A, Scarpelli C, Wincker P, Weissenbach J, Brey P, Roth C: Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Genome Biology 2005, 6:R39.
-
(2005)
Genome Biology
, vol.6
-
-
Gomez, S.1
Eiglmeier, K.2
Segurens, B.3
Dehoux, P.4
Couloux, A.5
Scarpelli, C.6
Wincker, P.7
Weissenbach, J.8
Brey, P.9
Roth, C.10
-
8
-
-
79960655760
-
The DNA sequence of human chromosome 22
-
Dunham I, Shimizu N, Roe BA, Chissoe S, Dunham I, Hunt AR, Collins JE, Bruskiewich R, Beare DM, Clamp M, et al.: The DNA sequence of human chromosome 22. Nature 1999, 402:489-495.
-
(1999)
Nature
, vol.402
, pp. 489-495
-
-
Dunham, I.1
Shimizu, N.2
Roe, B.A.3
Chissoe, S.4
Dunham, I.5
Hunt, A.R.6
Collins, J.E.7
Bruskiewich, R.8
Beare, D.M.9
Clamp, M.10
-
9
-
-
0035895505
-
The sequence of the human genome
-
Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, Sutton GG, Smith HO, Yandell M, Evans CA, Holt RA, et al.: The sequence of the human genome. Science 2001, 291:1304-1351.
-
(2001)
Science
, vol.291
, pp. 1304-1351
-
-
Venter, J.C.1
Adams, M.D.2
Myers, E.W.3
Li, P.W.4
Mural, R.J.5
Sutton, G.G.6
Smith, H.O.7
Yandell, M.8
Evans, C.A.9
Holt, R.A.10
-
10
-
-
0037020114
-
The genome sequence of the malaria mosquito Anopheles gambiae
-
Holt RA, Subramanian GM, Halpern A, Sutton GG, Charlab R, Nusskern DR, Wincker P, Clark AG, Ribeiro JMC, Wides R, et al.: The genome sequence of the malaria mosquito Anopheles gambiae. Science 2002, 298:129-149.
-
(2002)
Science
, vol.298
, pp. 129-149
-
-
Holt, R.A.1
Subramanian, G.M.2
Halpern, A.3
Sutton, G.G.4
Charlab, R.5
Nusskern, D.R.6
Wincker, P.7
Clark, A.G.8
Ribeiro, J.M.C.9
Wides, R.10
-
11
-
-
0036679565
-
Improving gene recognition accuracy by combining predictions from two gene-finding programs
-
Rogic S, Ouellette BFF, Mackworth AK: Improving gene recognition accuracy by combining predictions from two gene-finding programs. Bioinformatics 2002, 18:1034-1045.
-
(2002)
Bioinformatics
, vol.18
, pp. 1034-1045
-
-
Rogic, S.1
Ouellette, B.F.F.2
Mackworth, A.K.3
-
12
-
-
0041930775
-
Bioinformatics. Gene counters struggle to get the right answer
-
Pennisi E: Bioinformatics. Gene counters struggle to get the right answer. Science 2003, 301:1040-1041.
-
(2003)
Science
, vol.301
, pp. 1040-1041
-
-
Pennisi, E.1
-
13
-
-
0033635022
-
Artemis: Sequence visualization and annotation
-
Rutherford K, Parkhill J, Crook J, Horsnell T, Rice P, Rajandream MA, Barrell B: Artemis: sequence visualization and annotation. Bioinformatics 2000, 16:944-945.
-
(2000)
Bioinformatics
, vol.16
, pp. 944-945
-
-
Rutherford, K.1
Parkhill, J.2
Crook, J.3
Horsnell, T.4
Rice, P.5
Rajandream, M.A.6
Barrell, B.7
-
14
-
-
1542328964
-
Complement-like protein TEPI is a determinant of vectorial capacity in the malaria vector Anopheles gambiae
-
Blandin S, Shiao SH, Moita LF, Janse CJ, Waters AP, Kafatos FC, Levashina EA: Complement-like protein TEPI is a determinant of vectorial capacity in the malaria vector Anopheles gambiae. Cell 2004, 116:661-670.
-
(2004)
Cell
, vol.116
, pp. 661-670
-
-
Blandin, S.1
Shiao, S.H.2
Moita, L.F.3
Janse, C.J.4
Waters, A.P.5
Kafatos, F.C.6
Levashina, E.A.7
-
15
-
-
18944377180
-
Serendipitous discovery of Wolbachia genomes in multiple Drosophila species
-
Salzberg SL, Hotopp JCD, Delcher AL, Pop M, Smith DR, Eisen MB, Nelson WC: Serendipitous discovery of Wolbachia genomes in multiple Drosophila species. Genome Biology 2005, 6:R23.
-
(2005)
Genome Biology
, vol.6
-
-
Salzberg, S.L.1
Hotopp, J.C.D.2
Delcher, A.L.3
Pop, M.4
Smith, D.R.5
Eisen, M.B.6
Nelson, W.C.7
-
16
-
-
7444260846
-
The ENCODE (ENCyclopedia Of DNA Elements) Project
-
The ENCODE Project Consortium
-
The ENCODE Project Consortium: The ENCODE (ENCyclopedia Of DNA Elements) Project Science 2004, 306:636-640.
-
(2004)
Science
, vol.306
, pp. 636-640
-
-
-
17
-
-
0034098729
-
Genome annotation assessment in Drosophila melanogaster
-
Reese MG, Hartzell G, Harris NL, Ohler U, Abril JF, Lewis SE: Genome annotation assessment in Drosophila melanogaster. Genome Res 2000, 10:483-501.
-
(2000)
Genome Res
, vol.10
, pp. 483-501
-
-
Reese, M.G.1
Hartzell, G.2
Harris, N.L.3
Ohler, U.4
Abril, J.F.5
Lewis, S.E.6
-
18
-
-
0033782834
-
An assessment of gene prediction accuracy in large DNA sequences
-
Guigo R, Agarwal P, Abril JF, Burset M, Fickett JW: An assessment of gene prediction accuracy in large DNA sequences. Genome Res 2000, 10:1631-1642.
-
(2000)
Genome Res
, vol.10
, pp. 1631-1642
-
-
Guigo, R.1
Agarwal, P.2
Abril, J.F.3
Burset, M.4
Fickett, J.W.5
-
19
-
-
13444267288
-
A computational and experimental approach to validating annotations and gene predictions in the Drosophila melanogaster genome
-
Yandell M, Bailey AM, Misra S, Shu S, Wiel C, Evans-Holm M, Celniker SE, Rubin GM: A computational and experimental approach to validating annotations and gene predictions in the Drosophila melanogaster genome. Proc Natl Acad Sci USA 2005, 102:1566-1571.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 1566-1571
-
-
Yandell, M.1
Bailey, A.M.2
Misra, S.3
Shu, S.4
Wiel, C.5
Evans-Holm, M.6
Celniker, S.E.7
Rubin, G.M.8
-
20
-
-
0030614959
-
Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
-
Nielsen H, Engelbrecht J, Brunak S, von Heijne G: Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Protein Eng 1997, 10:1-6.
-
(1997)
Protein Eng
, vol.10
, pp. 1-6
-
-
Nielsen, H.1
Engelbrecht, J.2
Brunak, S.3
von Heijne, G.4
-
22
-
-
0034069495
-
Gene ontology: Tool for the unification of biology. The Gene Ontology Consortium
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, et al.: Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 2000, 25:25-29.
-
(2000)
Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
-
23
-
-
0036087630
-
CDD: A database of conserved domain alignments with links to domain three-dimensional structure
-
Marchler-Bauer A, Panchenko AR, Shoemaker BA, Thiessen PA, Geer LY, Bryant SH: CDD: a database of conserved domain alignments with links to domain three-dimensional structure. Nucleic Acids Res 2002, 30:281-283.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 281-283
-
-
Marchler-Bauer, A.1
Panchenko, A.R.2
Shoemaker, B.A.3
Thiessen, P.A.4
Geer, L.Y.5
Bryant, S.H.6
-
24
-
-
5044223309
-
AnoXcel: An Anopheles gambiae protein database
-
Ribeiro JM, Topalis P, Louis C: AnoXcel: an Anopheles gambiae protein database. Insect Mol Biol 2004, 13:449-457.
-
(2004)
Insect Mol Biol
, vol.13
, pp. 449-457
-
-
Ribeiro, J.M.1
Topalis, P.2
Louis, C.3
-
25
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25:3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
26
-
-
0032849859
-
CAP3: A DNA sequence assembly program
-
Huang XQ, Madan A: CAP3: A DNA sequence assembly program. Genome Res 1999, 9:868-877.
-
(1999)
Genome Res
, vol.9
, pp. 868-877
-
-
Huang, X.Q.1
Madan, A.2
-
27
-
-
0038304838
-
Exploring the salivary gland transcriptome and proteome of the Anopheles stephensi mosquito
-
Valenzuela JG, Francischetti IM, Pham VM, Garfield MK, Ribeiro JM: Exploring the salivary gland transcriptome and proteome of the Anopheles stephensi mosquito. Insect Biochem Mol Biol 2003, 33:717-732.
-
(2003)
Insect Biochem Mol Biol
, vol.33
, pp. 717-732
-
-
Valenzuela, J.G.1
Francischetti, I.M.2
Pham, V.M.3
Garfield, M.K.4
Ribeiro, J.M.5
-
28
-
-
0042239289
-
A catalogue of Anopheles gambiae transcripts significantly more or less expressed following a blood meal
-
Ribeiro JM: A catalogue of Anopheles gambiae transcripts significantly more or less expressed following a blood meal. Insect Biochem Mol Biol 2003, 33:865-882.
-
(2003)
Insect Biochem Mol Biol
, vol.33
, pp. 865-882
-
-
Ribeiro, J.M.1
-
29
-
-
22544434906
-
Gene expression patterns associated with blood-feeding in the malaria mosquito Anopheles gambiae
-
Dana AN, Hong YS, Kern MK, Hillenmeyer ME, Harker BW, Lobo NF, Hogan JR, Romans P, Collins FH: Gene expression patterns associated with blood-feeding in the malaria mosquito Anopheles gambiae. BMC Genomics 2005, 6:5.
-
(2005)
BMC Genomics
, vol.6
, pp. 5
-
-
Dana, A.N.1
Hong, Y.S.2
Kern, M.K.3
Hillenmeyer, M.E.4
Harker, B.W.5
Lobo, N.F.6
Hogan, J.R.7
Romans, P.8
Collins, F.H.9
-
30
-
-
24044499681
-
Microarray analysis of genes showing variable expression following a bloodmeal in Anopheles gambiae
-
Marinotti O, Nguyen QK, Calvo E, James AA, Ribeiro JMC: Microarray analysis of genes showing variable expression following a bloodmeal in Anopheles gambiae. Insect Mol Biol 2005, 14:365-374.
-
(2005)
Insect Mol Biol
, vol.14
, pp. 365-374
-
-
Marinotti, O.1
Nguyen, Q.K.2
Calvo, E.3
James, A.A.4
Ribeiro, J.M.C.5
-
31
-
-
0035807808
-
Candidate odorant receptors from the malaria vector mosquito Anopheles gambiae and evidence of down-regulation in response to blood feeding
-
Fox AN, Pitts RJ, Robertson HM, Carlson JR, Zwiebel LJ: Candidate odorant receptors from the malaria vector mosquito Anopheles gambiae and evidence of down-regulation in response to blood feeding. Proc Natl Acad Sci USA 2001, 98:14693-14697.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 14693-14697
-
-
Fox, A.N.1
Pitts, R.J.2
Robertson, H.M.3
Carlson, J.R.4
Zwiebel, L.J.5
-
32
-
-
0037020194
-
Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster
-
Zdobnov EM, von Mering C, Letunic I, Torrents D, Suyama M, Copley RR, Christophides GK, Thomasova D, Holt RA, Subramanian GM, et al.: Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster. Science 2002, 298:149-159.
-
(2002)
Science
, vol.298
, pp. 149-159
-
-
Zdobnov, E.M.1
von Mering, C.2
Letunic, I.3
Torrents, D.4
Suyama, M.5
Copley, R.R.6
Christophides, G.K.7
Thomasova, D.8
Holt, R.A.9
Subramanian, G.M.10
-
33
-
-
33745021461
-
-
ENSEMBL Genomes [ftp://ftp.ensembl.org/pub/release-26/anopheles-26.2b/]
-
ENSEMBL Genomes [ftp://ftp.ensembl.org/pub/release-26/anopheles-26.2b/]
-
-
-
-
34
-
-
2442707676
-
The Ensembl automatic gene annotation system
-
Curwen V, Eyras E, Andrews TD, Clarke L, Mongin E, Searle SMJ, Clamp M: The Ensembl automatic gene annotation system. Genome Res 2004, 14:942-950.
-
(2004)
Genome Res
, vol.14
, pp. 942-950
-
-
Curwen, V.1
Eyras, E.2
Andrews, T.D.3
Clarke, L.4
Mongin, E.5
Searle, S.M.J.6
Clamp, M.7
-
35
-
-
33745050945
-
-
NCBI Genomes
-
NCBI Genomes [http://www.ncbi.nlm.nih.gov]
-
-
-
-
36
-
-
0037790561
-
Efficient clustering of large EST data sets on parallel computers
-
Kalyanaraman A, Aluru S, Kothari S, Brendel V: Efficient clustering of large EST data sets on parallel computers. Nucleic Acids Res 2003, 31:2963-2974.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 2963-2974
-
-
Kalyanaraman, A.1
Aluru, S.2
Kothari, S.3
Brendel, V.4
-
37
-
-
0036226603
-
BLAT - The BLAST-like alignment tool
-
Kent WJ: BLAT - The BLAST-like alignment tool. Genome Res 2002, 12:656-664.
-
(2002)
Genome Res
, vol.12
, pp. 656-664
-
-
Kent, W.J.1
-
38
-
-
33745043329
-
-
MySQL Home Page
-
MySQL Home Page [http://www.mysql.com]
-
-
-
-
39
-
-
0033990048
-
Primer3 on the WWW for general users and for biologist programmers
-
Edited by: KSaM S. Totowa: Humania Press
-
Skaletsky SRaHJ: Primer3 on the WWW for general users and for biologist programmers. In Bioinformatics Methods and Protocols: Methods in Molecular Biology Edited by: KSaM S. Totowa: Humania Press; 2000:365-386.
-
(2000)
Bioinformatics Methods and Protocols: Methods in Molecular Biology
, pp. 365-386
-
-
Skaletsky, S.Ra.H.J.1
-
40
-
-
0036828724
-
Probability-based validation of protein identifications using a modified SEQUEST algorithm
-
MacCoss MJ, Wu CC, Yates JR 3rd: Probability-based validation of protein identifications using a modified SEQUEST algorithm. Anal Chem 2002, 74:5593-5599.
-
(2002)
Anal Chem
, vol.74
, pp. 5593-5599
-
-
MacCoss, M.J.1
Wu, C.C.2
Yates III, J.R.3
-
41
-
-
33745012443
-
-
ReAnoCDS05 Reannotation from authors
-
ReAnoCDS05 Reannotation from authors [http://vlab.umn.edu/download/GenomeAnnotation/]
-
-
-
-
42
-
-
33745032374
-
-
ReAnoCDS05 Reannotation from NCBI [ftp://ftp.ncbi.nih.gov/pub/omes /ReAnoXcel]
-
ReAnoCDS05 Reannotation from NCBI [ftp://ftp.ncbi.nih.gov/pub/omes/ ReAnoXcel]
-
-
-
-
43
-
-
33745029124
-
-
Artemis Genome Viewer
-
Artemis Genome Viewer [http://www.sanger.ac.uk/Software/Artemis]
-
-
-
-
44
-
-
33745044539
-
-
ReAnoXcel Protein Functional Annotation Spreadsheet
-
ReAnoXcel Protein Functional Annotation Spreadsheet [http://www.ncbi.nlm.nih.gov/projects/omes/#reanoxcel]
-
-
-
-
45
-
-
0034633763
-
Genes identified by an expression screen of the vector mosquito Anopheles gambiae display differential molecular immune response to malaria parasites and bacteria
-
Oduol F, Xu JN, Niare O, Natarajan R, Vernick KD: Genes identified by an expression screen of the vector mosquito Anopheles gambiae display differential molecular immune response to malaria parasites and bacteria. Proc Natl Acad Sci USA 2000, 97:11397-11402.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 11397-11402
-
-
Oduol, F.1
Xu, J.N.2
Niare, O.3
Natarajan, R.4
Vernick, K.D.5
|