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Volumn 122, Issue 1, 2006, Pages 58-65

Comparison of the molten globule states of thermophilic and mesophilic α-amylases

Author keywords

amylase; Aggregation; Folding pathway; Molten globule states; Stability

Indexed keywords

8 ANILINO 1 NAPHTHALENESULFONIC ACID; AMYLASE; BACTERIAL ENZYME; ENZYME; GLYCEROL; GUANIDINE; PEPSIN A; POLYOL; SORBITOL; TREHALOSE;

EID: 33744972619     PISSN: 03014622     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bpc.2005.12.014     Document Type: Article
Times cited : (17)

References (49)
  • 1
    • 0034724271 scopus 로고    scopus 로고
    • Do ultrastable proteins from hyperthermophiles have high or low conformational rigidity?
    • Jaenicke R. Do ultrastable proteins from hyperthermophiles have high or low conformational rigidity?. Proc. Natl. Acad. Sci. U. S. A. 97 (2000) 2962-2964
    • (2000) Proc. Natl. Acad. Sci. U. S. A. , vol.97 , pp. 2962-2964
    • Jaenicke, R.1
  • 2
    • 0033066726 scopus 로고    scopus 로고
    • Extremophiles and their adaptation to hot environments
    • Stetter K.O. Extremophiles and their adaptation to hot environments. FEBS Lett. 452 (1999) 22-25
    • (1999) FEBS Lett. , vol.452 , pp. 22-25
    • Stetter, K.O.1
  • 4
    • 0034191064 scopus 로고    scopus 로고
    • The stability of thermophilic proteins: a study based on comprehensive genome comparison
    • Das R., and Gerstein M. The stability of thermophilic proteins: a study based on comprehensive genome comparison. Funct. Integr. Genomics 1 (2000) 76-88
    • (2000) Funct. Integr. Genomics , vol.1 , pp. 76-88
    • Das, R.1    Gerstein, M.2
  • 5
    • 0035098779 scopus 로고    scopus 로고
    • Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability
    • Vieille C., and Zeikus G. Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability. Microbiol. Mol. Biol. Rev. 65 (2001) 1-43
    • (2001) Microbiol. Mol. Biol. Rev. , vol.65 , pp. 1-43
    • Vieille, C.1    Zeikus, G.2
  • 6
    • 3343015685 scopus 로고    scopus 로고
    • Structural stability and unfolding properties of thermostable bacterial α-amylases: a comparative study of homologous enzymes
    • Fitter J., and Haber-Pohlmeier S. Structural stability and unfolding properties of thermostable bacterial α-amylases: a comparative study of homologous enzymes. Biochemistry 43 (2004) 9589-9599
    • (2004) Biochemistry , vol.43 , pp. 9589-9599
    • Fitter, J.1    Haber-Pohlmeier, S.2
  • 7
    • 0034714134 scopus 로고    scopus 로고
    • Probing structural determinants specifying high thermostability in Bacillus licheniformis α-amylase
    • Declerck N., Machius M., Wiegand G., Huber R., and Gaillardin C. Probing structural determinants specifying high thermostability in Bacillus licheniformis α-amylase. J. Mol. Biol. 301 (2000) 1041-1057
    • (2000) J. Mol. Biol. , vol.301 , pp. 1041-1057
    • Declerck, N.1    Machius, M.2    Wiegand, G.3    Huber, R.4    Gaillardin, C.5
  • 8
    • 0026210241 scopus 로고
    • Analysis and modulation of protein stability
    • Fontana A. Analysis and modulation of protein stability. Curr. Opin. Biotechnol. 2 (1991) 551-560
    • (1991) Curr. Opin. Biotechnol. , vol.2 , pp. 551-560
    • Fontana, A.1
  • 9
    • 0034736267 scopus 로고    scopus 로고
    • Distributions of structural features contributing to thermostability in mesophilic and thermophilic α/β barrel glycosyl hydrolases
    • Panasik J.N., Brenchley J.E., and Farber G.K. Distributions of structural features contributing to thermostability in mesophilic and thermophilic α/β barrel glycosyl hydrolases. Biochim. Biophys. Acta 1543 (2000) 189-201
    • (2000) Biochim. Biophys. Acta , vol.1543 , pp. 189-201
    • Panasik, J.N.1    Brenchley, J.E.2    Farber, G.K.3
  • 10
    • 0344845290 scopus 로고    scopus 로고
    • The guanidine like effects of arginine on aminoacylase and salt-induced molten globule state
    • Xie Q., Guo T., Lu J., and Zhou H.M. The guanidine like effects of arginine on aminoacylase and salt-induced molten globule state. Int. J. Biochem. Cell Biol. 36 (2004) 296-306
    • (2004) Int. J. Biochem. Cell Biol. , vol.36 , pp. 296-306
    • Xie, Q.1    Guo, T.2    Lu, J.3    Zhou, H.M.4
  • 11
    • 7044228278 scopus 로고    scopus 로고
    • Characterization of a partially folded intermediate of papain induced by fluorinated alcohols at low pH
    • Naeem A., Khan K.A., and Khan R.H. Characterization of a partially folded intermediate of papain induced by fluorinated alcohols at low pH. Arch. Biochem. Biophys. 432 (2004) 79-87
    • (2004) Arch. Biochem. Biophys. , vol.432 , pp. 79-87
    • Naeem, A.1    Khan, K.A.2    Khan, R.H.3
  • 12
    • 4143133310 scopus 로고    scopus 로고
    • Characterization of molten globule state of cytochrome c at alkaline, native and acidic pH induced by butanol and SDS
    • Naeem A., and Khan R.H. Characterization of molten globule state of cytochrome c at alkaline, native and acidic pH induced by butanol and SDS. Int. J. Biochem. Cell Biol. 36 (2004) 2281-2292
    • (2004) Int. J. Biochem. Cell Biol. , vol.36 , pp. 2281-2292
    • Naeem, A.1    Khan, R.H.2
  • 14
    • 0035005366 scopus 로고    scopus 로고
    • Preorganized secondary structure as an important determinant of fast protein folding
    • Myers J.K., and Oas T.G. Preorganized secondary structure as an important determinant of fast protein folding. Nat. Struct. Biol. 8 (2001) 552-558
    • (2001) Nat. Struct. Biol. , vol.8 , pp. 552-558
    • Myers, J.K.1    Oas, T.G.2
  • 15
    • 0035830763 scopus 로고    scopus 로고
    • Reactivation and refolding of rabbit muscle creatine kinase denatured in 2,2,2-trifluoroethanol solutions
    • Huang K., Park Y.D., Cao Z.F., and Zhou H.M. Reactivation and refolding of rabbit muscle creatine kinase denatured in 2,2,2-trifluoroethanol solutions. Biochim. Biophys. Acta 1545 (2001) 305-313
    • (2001) Biochim. Biophys. Acta , vol.1545 , pp. 305-313
    • Huang, K.1    Park, Y.D.2    Cao, Z.F.3    Zhou, H.M.4
  • 16
    • 2442567941 scopus 로고    scopus 로고
    • Reshaping the folding energy landscape by chloride salt: impact on molten-globule formation and aggregation behavior of carbonic anhydrase
    • Borén K., Grankvist H., Hammarström P., and Carlsson U. Reshaping the folding energy landscape by chloride salt: impact on molten-globule formation and aggregation behavior of carbonic anhydrase. FEBS Lett. 566 (2004) 95-99
    • (2004) FEBS Lett. , vol.566 , pp. 95-99
    • Borén, K.1    Grankvist, H.2    Hammarström, P.3    Carlsson, U.4
  • 18
    • 13144305048 scopus 로고    scopus 로고
    • Activation of Bacillus licheniformis α-amylase through a disorder→order transition of the substrate-binding site mediated by a calcium-sodium-calcium metal triad
    • Machius M., Declerck N., Huber R., and Wiegand G. Activation of Bacillus licheniformis α-amylase through a disorder→order transition of the substrate-binding site mediated by a calcium-sodium-calcium metal triad. Structure 6 (1998) 281-292
    • (1998) Structure , vol.6 , pp. 281-292
    • Machius, M.1    Declerck, N.2    Huber, R.3    Wiegand, G.4
  • 19
    • 0030986231 scopus 로고    scopus 로고
    • Hyperthermostable mutants of Bacillus licheniformis α-amylase: thermodynamic studies and structural interpretation
    • Declerck N., Machius M., Chambert R., Wiegand G., Huber R., and Gaillardin C. Hyperthermostable mutants of Bacillus licheniformis α-amylase: thermodynamic studies and structural interpretation. Protein Eng. 10 (1997) 541-549
    • (1997) Protein Eng. , vol.10 , pp. 541-549
    • Declerck, N.1    Machius, M.2    Chambert, R.3    Wiegand, G.4    Huber, R.5    Gaillardin, C.6
  • 20
    • 0028289989 scopus 로고
    • Stability and structural analysis of α-amylase from the antarctic psychrophile Alteromonas haloplanctis A23
    • Feller G., Payan F., Theys F., Qian M., Haser R., and Gerday C. Stability and structural analysis of α-amylase from the antarctic psychrophile Alteromonas haloplanctis A23. Eur. J. Biochem. 222 (1994) 441-447
    • (1994) Eur. J. Biochem. , vol.222 , pp. 441-447
    • Feller, G.1    Payan, F.2    Theys, F.3    Qian, M.4    Haser, R.5    Gerday, C.6
  • 22
    • 0035855207 scopus 로고    scopus 로고
    • Chemical modification of bacterial α-amylases: changes in tertiary structures and the effect of additional calcium
    • Khajeh K., Ranjbar B., Naderi-Manesh H., Ebrahim-Habibi A., and Nemat-Gorgani M. Chemical modification of bacterial α-amylases: changes in tertiary structures and the effect of additional calcium. Biochim. Biophys. Acta 1548 (2001) 229-237
    • (2001) Biochim. Biophys. Acta , vol.1548 , pp. 229-237
    • Khajeh, K.1    Ranjbar, B.2    Naderi-Manesh, H.3    Ebrahim-Habibi, A.4    Nemat-Gorgani, M.5
  • 23
    • 3042653305 scopus 로고    scopus 로고
    • Comparative studies on trifluoroethanol (TFE) state of a thermophilic α-amylase and its mesophilic counterpart: limited proteolysis, conformational analysis, aggregation and reactivation of the enzymes
    • Asghari S.M., Khajeh K., Ranjbar B., Sajedi R.H., and Naderi-Manesh H. Comparative studies on trifluoroethanol (TFE) state of a thermophilic α-amylase and its mesophilic counterpart: limited proteolysis, conformational analysis, aggregation and reactivation of the enzymes. Int. J. Biol. Macromol. 34 (2004) 173-179
    • (2004) Int. J. Biol. Macromol. , vol.34 , pp. 173-179
    • Asghari, S.M.1    Khajeh, K.2    Ranjbar, B.3    Sajedi, R.H.4    Naderi-Manesh, H.5
  • 25
    • 33748037939 scopus 로고
    • Amylase, α and β
    • Bernfeld P. Amylase, α and β. Methods Enzymol. 1 (1955) 149-151
    • (1955) Methods Enzymol. , vol.1 , pp. 149-151
    • Bernfeld, P.1
  • 27
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227 (1970) 680-685
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 28
    • 0029910017 scopus 로고    scopus 로고
    • Molten-globule state of carbonic anhydrase binds to the chaperone-like α-crytallin
    • Rajaraman K., Raman B., and Rao C.M. Molten-globule state of carbonic anhydrase binds to the chaperone-like α-crytallin. J. Biol. Chem. 271 (1996) 27595-27600
    • (1996) J. Biol. Chem. , vol.271 , pp. 27595-27600
    • Rajaraman, K.1    Raman, B.2    Rao, C.M.3
  • 29
    • 0023697408 scopus 로고
    • Unfolding free energy changes determined by the linear extrapolation method: 1. Unfolding of phenylmethanesulfonyl alpha-chymotrypsin using different denaturants
    • Santoro M.M., and Bolen D.W. Unfolding free energy changes determined by the linear extrapolation method: 1. Unfolding of phenylmethanesulfonyl alpha-chymotrypsin using different denaturants. Biochemistry 27 (1988) 8063-8068
    • (1988) Biochemistry , vol.27 , pp. 8063-8068
    • Santoro, M.M.1    Bolen, D.W.2
  • 30
    • 0020475449 scopus 로고
    • A simple method for displaying the hydropathic character of a protein
    • Kyte J., and Doolittle R.F. A simple method for displaying the hydropathic character of a protein. J. Mol. Biol. 157 (1982) 105-132
    • (1982) J. Mol. Biol. , vol.157 , pp. 105-132
    • Kyte, J.1    Doolittle, R.F.2
  • 31
    • 0028933531 scopus 로고
    • Crystal structure of calcium-depleted Bacillus licheniformis α-amylase at 2.2 Å resolution
    • Machius M., Wiegand G., and Huber R. Crystal structure of calcium-depleted Bacillus licheniformis α-amylase at 2.2 Å resolution. J. Mol. Biol. 246 (1995) 545-559
    • (1995) J. Mol. Biol. , vol.246 , pp. 545-559
    • Machius, M.1    Wiegand, G.2    Huber, R.3
  • 33
    • 0025195499 scopus 로고
    • Mechanism of acid-induced folding of proteins
    • Goto Y., Takahashi N., and Fink A.L. Mechanism of acid-induced folding of proteins. Biochemistry 29 (1990) 3480-3488
    • (1990) Biochemistry , vol.29 , pp. 3480-3488
    • Goto, Y.1    Takahashi, N.2    Fink, A.L.3
  • 34
    • 0036153595 scopus 로고    scopus 로고
    • Characterization of a partially folded intermediate of stem bromelain at low pH
    • Haq S.K., Rasheedi S., and Khan R.H. Characterization of a partially folded intermediate of stem bromelain at low pH. Eur. J. Biochem. 269 (2002) 47-52
    • (2002) Eur. J. Biochem. , vol.269 , pp. 47-52
    • Haq, S.K.1    Rasheedi, S.2    Khan, R.H.3
  • 35
    • 0033756327 scopus 로고    scopus 로고
    • Characterization of acid-induced unfolding intermediates of glucose/xylose isomerase
    • Pawar S.A., and Deshpande V.V. Characterization of acid-induced unfolding intermediates of glucose/xylose isomerase. Eur. J. Biochem. 267 (2000) 6331-6338
    • (2000) Eur. J. Biochem. , vol.267 , pp. 6331-6338
    • Pawar, S.A.1    Deshpande, V.V.2
  • 37
    • 0029040449 scopus 로고
    • Thermodynamic stability of the molten globule states of apomyoglobin
    • Nishii I., Kataoka M., and Goto Y. Thermodynamic stability of the molten globule states of apomyoglobin. J. Mol. Biol. 250 (1995) 223-238
    • (1995) J. Mol. Biol. , vol.250 , pp. 223-238
    • Nishii, I.1    Kataoka, M.2    Goto, Y.3
  • 39
    • 2942549124 scopus 로고    scopus 로고
    • Acid-induced conformational changes in Bacillus amyloliquefaciens α-amylase: appearance of a molten globule like state
    • Asghari S.M., Khajeh K., Moradian F., Ranjbar B., and Naderi-Manesh H. Acid-induced conformational changes in Bacillus amyloliquefaciens α-amylase: appearance of a molten globule like state. Enzyme Mirob. Technol. 35 (2004) 51-57
    • (2004) Enzyme Mirob. Technol. , vol.35 , pp. 51-57
    • Asghari, S.M.1    Khajeh, K.2    Moradian, F.3    Ranjbar, B.4    Naderi-Manesh, H.5
  • 40
    • 0032539578 scopus 로고    scopus 로고
    • The structural aspects of limited proteolysis of native proteins
    • Hubbard S.J. The structural aspects of limited proteolysis of native proteins. Biochim. Biophys. Acta 1382 (1998) 191-206
    • (1998) Biochim. Biophys. Acta , vol.1382 , pp. 191-206
    • Hubbard, S.J.1
  • 42
    • 0034951922 scopus 로고    scopus 로고
    • Proteolysis of mesophilic and thermophilic alpha-amylases: a comparative study
    • Khajeh K., Khezre-Barati S., and Nemat-Gorgani M. Proteolysis of mesophilic and thermophilic alpha-amylases: a comparative study. Appl. Biochem. Biotechnol. 94 (2001) 97-109
    • (2001) Appl. Biochem. Biotechnol. , vol.94 , pp. 97-109
    • Khajeh, K.1    Khezre-Barati, S.2    Nemat-Gorgani, M.3
  • 43
    • 0018789680 scopus 로고
    • Increased thermal stability of proteins in the presence of sugars and polyols
    • Back J.F., Oakenfull D., and Smith M.B. Increased thermal stability of proteins in the presence of sugars and polyols. Biochemistry 18 (1979) 5191-5196
    • (1979) Biochemistry , vol.18 , pp. 5191-5196
    • Back, J.F.1    Oakenfull, D.2    Smith, M.B.3
  • 44
    • 0020477017 scopus 로고
    • Stabilization of protein structure by sugars
    • Arakawa T., and Timasheff S.N. Stabilization of protein structure by sugars. Biochemistry 21 (1982) 6536-6544
    • (1982) Biochemistry , vol.21 , pp. 6536-6544
    • Arakawa, T.1    Timasheff, S.N.2
  • 45
    • 0036295079 scopus 로고    scopus 로고
    • Comparison of the folding processes of T. thermophilus and E. coli ribonucleases H
    • Hollien J., and Marqusee S. Comparison of the folding processes of T. thermophilus and E. coli ribonucleases H. J. Mol. Biol. 316 (2002) 327-340
    • (2002) J. Mol. Biol. , vol.316 , pp. 327-340
    • Hollien, J.1    Marqusee, S.2
  • 46
    • 0035823118 scopus 로고    scopus 로고
    • Comparison of the denaturant-induced unfolding of the bovine and human α-lactalbumin molten globules
    • Wijesinha-Bettoni R., Dobson C.M., and Redfield C. Comparison of the denaturant-induced unfolding of the bovine and human α-lactalbumin molten globules. J. Mol. Biol. 312 (2001) 261-273
    • (2001) J. Mol. Biol. , vol.312 , pp. 261-273
    • Wijesinha-Bettoni, R.1    Dobson, C.M.2    Redfield, C.3
  • 47
    • 11144235692 scopus 로고    scopus 로고
    • A comparative study of the α-subdomains of bovine and human α-lactalbumin reveals key differences that correlate with molten globule stability
    • Chowdhury F.A., and Raleigh D.P. A comparative study of the α-subdomains of bovine and human α-lactalbumin reveals key differences that correlate with molten globule stability. Protein Sci. 14 (2005) 89-96
    • (2005) Protein Sci. , vol.14 , pp. 89-96
    • Chowdhury, F.A.1    Raleigh, D.P.2
  • 48
    • 0037424370 scopus 로고    scopus 로고
    • Activity-stability relationships in extremophilic enzymes
    • D'Amico S., Marx J.C., Gerday C., and Feller G. Activity-stability relationships in extremophilic enzymes. J. Biol. Chem. 278 (2003) 7891-7896
    • (2003) J. Biol. Chem. , vol.278 , pp. 7891-7896
    • D'Amico, S.1    Marx, J.C.2    Gerday, C.3    Feller, G.4
  • 49
    • 0027427290 scopus 로고
    • Does the increased hydrophobicity of the interior and hydrophilicity of the exterior of an enzyme structure reflect its increased thermostability?
    • Janeček Š. Does the increased hydrophobicity of the interior and hydrophilicity of the exterior of an enzyme structure reflect its increased thermostability?. Int. J. Biol. Macromol. (1993) 317-318
    • (1993) Int. J. Biol. Macromol. , pp. 317-318
    • Janeček, Š.1


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