Characterization and partial genome sequence of stocky prune virus, a new member of the genus Cheravirus

Archives of Virology

Volumn 151, Issue 6, 2006, Pages 1179-1188

  Candresse, T ^a,b   Svanella Dumas, L ^a   Le Gall, O ^a  

^a UNIVERSITÉ DE BORDEAUX   (France)

^b CEMAGREF   (France)

Author keywords

[No Author keywords available]

Indexed keywords

CAPSID PROTEIN; VIRUS RNA;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; CLUSTER ANALYSIS; DNA SEQUENCE; FRANCE; GENETICS; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; MOLECULAR WEIGHT; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT VIRUS; PRUNUS; RNA VIRUS; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY; ULTRASTRUCTURE; VIRION; VIROLOGY; VIRUS; VIRUS GENOME;

AMINO ACID SEQUENCE; CAPSID PROTEINS; CLUSTER ANALYSIS; FRANCE; GENOME, VIRAL; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; PHYLOGENY; PLANT VIRUSES; PRUNUS; RNA VIRUSES; RNA, VIRAL; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY; VIRION; VIRUSES;

APPLE LATENT SPHERICAL VIRUS; CHERRY RASP LEAF VIRUS; PRUNUS DOMESTICA;

EID: 33744466781     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-005-0682-y     Document Type: Article

References (30)

1. P Argos 1988 A sequence motif in many polymerases Nucleic Acids Res 16 9909 9916
2. JF Bazan RJ Fletterick 1988 Viral cysteine proteases are homologous to the trypsin-like family of serine proteases: structural and functional implications Proc Natl Acad Sci USA 85 7872 7876
3. T Candresse RP Delbos O Le Gall JC Desvignes 1998 Characterization of Stocky prune virus, a new Nepovirus detected in French prunes Acta Hortic 472 175 181
4. Desvignes JC (1990) Stocky prune. In: Desvignes JC (ed), Les virus des arbres fruitiers. CTIFL: 51-52
5. B Doz G Macquaire RP Delbos J Dunez 1980 Caractéristiques et rôle du RNA3, RNA satellite du virus des anneaux noirs de la tomate Ann Virol (Institut Pasteur) 131E 489 499
6. J Dunez RP Delbos R Bernardet 1973 Le rôle de différents facteurs de stabilisation appliqués à la purification du chlorotic leaf spot du pommier (CLSV) Ann Phytopathol 5 255 263
7. Gallitelli D, Martelli GP, Rana GL (1984) Artichoke vein banding virus. CMI/AAB Description of plant viruses No 285
8. D Gallitelli GL Rana A di Franco 1978 Il virus della scolorazione perinervale del carciofo Phytopath Medit 17 1 7
9. S German T Candresse O Le Gall M Lanneau J Dunez 1992 Analysis of the double stranded RNAs of apple chlorotic leaf spot virus J Gen Virol 73 767 773
10. AJ Hansen G Nyland FD [tmp] McElroy R Stace-Smith 1974 Origin, cause, host range and spread of cherry rasp leaf disease in North America Phytopathology 64 721 727
11. th August 2002
12. T Iwanami Y Kondo Y Makita C Azeyanagi H Ieki 1998 The nucleotide sequence of the coat protein genes of Satsuma dwarf virus and Navel orange infectious mottling virus Arch Virol 143 405 412
13. D James C Upton 2002 Nucleotide sequence analysis of the RNA-2 of a flat apple isolate of Cherry rasp leaf virus with regions showing greater identity to animal picornaviruses than to related plant viruses Arch Virol 147 1631 1641
14. D James C Upton 2005 Genome segment RNA-1 of a flat apple isolate of Cherry rasp leaf virus: nucleotide sequence analysis and RT-PCR detection Arch Virol 150 1469 1476
15. D James WE Howell GI Mink 2001 Molecular evidence of the relationships between a virus associated with flat apple disease and Cherry rasp leaf virus as determined by RT-PCR Plant Dis 85 47 52
16. Jones RAC, Kenten RH (1983) Arracacha virus B. CMI/AAB Description of plant viruses, No 270
17. AV Karasev SS Han T Iwanami 2001 Satsuma dwarf and related viruses belong to a new lineage of plant picorna-like viruses Virus Genes 23 45 52
18. RH Kenten RAC Jones 1979 Arracacha virus B, a second isometric virus infecting arracacha (Arracacia xanthorrhiza; Umbelliferae) in the Peruvian Andes Ann Appl Biol 93 31 36
19. S Kumar K Tamura IB Jakobsen M Nei 2001 MEGA2: Molecular Evolutionary Genetics Analysis software Bioinformatics 17 1244 1245
20. O Le Gall T Candresse V Brault J Dunez 1989 Nucleotide sequence of Hungarian grapevine chrome mosaic nepovirus RNA1 Nucleic Acids Res 17 7795 7807
21. O Le Gall T Iwanami AT Jones K Lehto H Sanfacon J Wellink T Wetzel N Yoshikawa 2005 Genus Cheravirus LA Ball CM Fauquet MA Mayo J Maniloff VIIIth Report of the International Committee on Taxonomy of Viruses Academic Press San Diego
22. C Li N Yoshikawa T Takahashi T Ito K Yoshida H Koganezawa 2000 Nucleotide sequence and genome organisation of Apple latent spherical virus: a new virus classified in the family Comoviridae J Gen Virol 81 541 547
23. Martelli GP, Taylor CE (1989) Distribution of viruses and their nematode vectors. In: Harris KF (ed) Advances in disease vector research, vol 6. pp 151-189
24. MA Mayo 2005 Changes to virus taxonomy 2004 Arch Virol 150 189 198
25. Stace-Smith R, Hansen AJ (1976) Cherry rasp leaf virus. CMI/AAB Description of plant viruses No 159
26. JD Thompson TJ Gibson F Plewniak F Jeanmougin DG Higgins 1997 The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acid Res 24 4876 4882
27. JR Thompson G Leone JL Lindner W Jelkmann CD Schoen 2002 Characterization and complete nucleotide sequence of Strawberry mottle virus: a tentative member of a new family of bipartite plant picorna-like viruses J Gen Virol 83 229 239
28. JR Thompson KL Perry W De Jong 2004 A new potato virus in a new lineage of picorna-like viruses Arch Virol 149 2141 2154
29. F Trény 1908 Maladie du prunier d'Ente La Fédération Agricole du Lot et Garonne 16 241 246
30. D Yvonneau 1905 Lettre ouverte à M. le Ministre de l'Agriculture Le Sol 21 69 71