Interleukin-1β and receptor antagonist (IL-1Ra) gene polymorphisms and the prediction of the risk of end-stage renal disease

Biomarkers

Volumn 11, Issue 2, 2006, Pages 164-173

  Manchanda, P K ^a   Kumar, A ^a   Bid, H K ^a   Mittal, R D ^a  

^a SANJAY GANDHI POSTGRADUATE INSTITUTE OF MEDICAL SCIENCES   (India)

Author keywords

End stage renal disease (ESRD); Haplotype; Interleukin (IL) 1 gene cluster; Polymorphism

Indexed keywords

INTERLEUKIN 1 RECEPTOR BLOCKING AGENT; INTERLEUKIN 1BETA; IL1RN PROTEIN, HUMAN; INTERLEUKIN 1; PRIMER DNA; SIALOGLYCOPROTEIN;

ADULT; ARTICLE; CONFIDENCE INTERVAL; CONTROLLED STUDY; ETHNOLOGY; EXON; FEMALE; GENE FREQUENCY; GENE IDENTIFICATION; GENETIC ASSOCIATION; GENETIC LINKAGE; GENETIC POLYMORPHISM; GENETIC RISK; GENETIC VARIABILITY; GENOTYPE; HAPLOTYPE; HUMAN; HUMAN CELL; KIDNEY FAILURE; MAJOR CLINICAL STUDY; MALE; PATHOGENESIS; PREDICTION; PROMOTER REGION; RISK ASSESSMENT; VARIABLE NUMBER OF TANDEM REPEAT; CHRONIC KIDNEY FAILURE; COHORT ANALYSIS; GENE LINKAGE DISEQUILIBRIUM; GENETICS; MULTIGENE FAMILY; NUCLEOTIDE SEQUENCE;

BASE SEQUENCE; COHORT STUDIES; DNA PRIMERS; GENOTYPE; HAPLOTYPES; HUMANS; INTERLEUKIN 1 RECEPTOR ANTAGONIST PROTEIN; INTERLEUKIN-1; KIDNEY FAILURE, CHRONIC; LINKAGE DISEQUILIBRIUM; MINISATELLITE REPEATS; MULTIGENE FAMILY; POLYMORPHISM, GENETIC; PROMOTER REGIONS (GENETICS); RISK ASSESSMENT; SIALOGLYCOPROTEINS;

EID: 33646839000     PISSN: 1354750X     EISSN: 13665804     Source Type: Journal    
DOI: 10.1080/13547500500525383     Document Type: Article

References (24)

1. Arend, WP and Malyak, M and Guthridge, CJ and Gabay, C. (1998) Interleukin-1 receptor antagonist: Role in biology Annual Review Immunology, 16, pp. 27-55.
2. Bensen, JT and Langefeld, CD and Hawkins, GA and Green, LE and Mychaleckyj, JC and Brewer, CS and Kiger, DS and Binford, SM and Colicigno, CJ and Allred, DC and (2003) Nucleotide variation, haplotype structure, and association with end-stage renal disease of the human interleukin-1 gene cluster Genomics, 82, pp. 194-217.
3. Bioque, G and Crusius, JBA and Koutroubakis, I and Bouma, G and Kostense, PJ and Meuwissen, SGM and Pena, AS. (1995) Allelic polymorphism in IL-1β (and IL-1 receptor antagonist (IL- 1Ra) genes in inflammatory bowel disease Clinical and Experimental Immunology, 102, pp. 379-383.
4. Cantagrel, A and Navaux, F and Lescoulie, LP and Nourhashemi, F and Enault, G and Abbal, M and Constantin, A and Laroche, M and Mazieres, B. (1999) Interleukin-1β, interleukin-1 receptor antagonist, interleukin-4 and interleukin-10 gene polymorphisms Arthritis and Rheumatism, 42, pp. 1093-1100.
5. Danis, VA and Millington, M and Hyland, VJ and Grennan, D. (1995) Cytokine production by normal human monocytes: Inter-subject variation and relationship to an IL-1 receptor antagonist (IL-1Ra) gene polymorphism Clinical and Experimental Immunology, 99, pp. 303-310.
6. Di Giovine, FS and Takhsh, E and Blakemore, AIF and Duff, GW. (1992) Single base polymorphism at -511 in the human interleukin1β gene Human and Molecular Genetics, 1, pp. 450.
7. Dusel, JA and Burdon, KP and Hicks, PJ and Hawkins, GA and Bowden, DW and Freedman, BI. (2005) Identification of podocin (NPHS2) gene mutations in African Americans with nondiabetic end-stage renal disease Kidney International, 68, pp. 256-262.
8. Freedman, BI and Yu, H and Spray, BJ and Rich, SS and Rothschild, CB and Bowden, DW. (1997) Genetic linkage analysis of growth factor loci and end-stage renal disease in African Americans Kidney International, 51, pp. 819-825.
9. Hughes, ME and Wilson, RM and Ward, JD and Duff, GW. (1996) Interleukin-1 receptor antagonist allele (IL1RN*2) associated with nephropathy in diabetes mellitus Human Genetics, 97, pp. 369-374.
10. Hurme, M and Santtila, S. (1998) IL-1 receptor antagonist (IL-1RA) plasma levels are co-ordinately regulated by both IL-1R and IL-1beta genes European Journal of Immunology, 28, pp. 2598-2602.
11. Hurme, M and Lahdenpohja, N and Santtila, S. (1998) Gene polymorphisms of interleukins 1 and 10 in infectious and autoimmune diseases Annals of Medicine, 30, pp. 469-473.
12. Labow, M and Schuster, D and Zetterstrom, M and Nunes, P and Terry, R and Cullinan, EB and Bartfai, T and Solorzano, C and Moldawer, LL and Chizzonite, R and McIntyre, KW. (1997) Absence of IL-1 signaling and reduced inflammatory response in IL-1-type I receptor deficient mice Journal of Immunology, 159, pp. 2452-2461.
13. Laurincová, B. (2000) Interleukin-1 family: From genes to human disease Acta Univ Palacki Olomuc Fac Med, 143, pp. 19-29.
14. Loughrey, BW and Maxwell, AP and Fogarty, DG and Middleton, D and Harron, JC and Patterson, CC and Darke, C and Savage, DA. (1998) An interleukin 1B allele, which correlates with a high secretion phenotype, is associated with diabetic nephropathy Cytokine, 10, pp. 984-988.
15. Miller, SA and Dykes, DD and Polesky, HF. (1988) A simple salting out procedure for extracting DNA from human nucleated cells Nucleic Acids Research, 16, pp. 1215.
16. Nordfors, L and Lindholm, B and Stenvinkel, P. (2005) End-stage renal disease - Not an equal opportunity disease: The role of genetic polymorphisms Journal of Internal Medicine, 258, pp. 1 - 12.
17. Satko, SG and Freedman, BI and Moossavi, S. (2005) Genetic factors in end-stage renal disease Kidney International, 67(Suppl. 94), pp. S46-S49.
18. Syrjanen, J and Hurme, M and Lehtimaki, T and Mustonen, J and Pasternack, A. (2002) Polymorphism of the cytokine genes and IgA nephropathy Kidney International, 61, pp. 1079-1085.
19. Tarlow, JK and Blakemore, AIF and Lennard, A and Solari, R and Hughes, HN and Steinkasserer, A and Duff, GW. (1993) Polymorphism in human IL-1 receptor antagonist gene intron 2 is caused by variable numbers of an 86 base pair tandem repeat Human Genetics, 91, pp. 403-404.
20. Uitterlinden, AG and Fang, Y and Van-Meurs, JB and Pols, HA and Van Leeuwen, JP. (2004) Genetics and biology of vitamin D receptor polymorphisms Gene, 338, pp. 143-156.
21. Vamvakopoulos, JE and Taylor, CJ and Morris-Stiff, GJ and Green, C and Metcalfe, S. (2002) The interleukin-1 receptor antagonist gene: A single-copy variant of the intron 2 variable number tandem repeat (VNTR) polymorphism European Journal of Immunogenetics, 29, pp. 337-340.
22. Wetmore, JB and Hung, AM and Lovett, DH and Sen, S and Quershy, O and Johansen, KL. (2005) Interleukin-1 gene cluster polymorphisms predict risk of ESRD Kidney International, 68, pp. 278-284.
23. Yao, Q and Lindholm, B and Stenvinkel, P. (2004) Inflammation as a cause of malnutrition, atherosclerotic cardiovascular disease, and poor outcome in hemodialysis patients Hemodialysis International, 8, pp. 118-129.
24. YooJ, SeoB, KimY. 2005. SNPAnalyzer: A web-based integrated workbench for single-nucleotide polymorphism analysis. Nucleic Acids Research 33(Web Server issue): W483-W488.