-
1
-
-
20544474210
-
Pathogen recognition with Toll-like receptors
-
Kawai, T. & Akira, S. Pathogen recognition with Toll-like receptors. Curr. Opin. Immunol. 17, 338-344 (2005).
-
(2005)
Curr. Opin. Immunol.
, vol.17
, pp. 338-344
-
-
Kawai, T.1
Akira, S.2
-
2
-
-
19344372271
-
Systems biology: Its practice and challenges
-
Aderem, A. Systems biology: its practice and challenges. Cell 121, 511-513 (2005).
-
(2005)
Cell
, vol.121
, pp. 511-513
-
-
Aderem, A.1
-
3
-
-
0037079054
-
Computational systems biology
-
Kitano, H. Computational systems biology. Nature 420, 206-210 (2002).
-
(2002)
Nature
, vol.420
, pp. 206-210
-
-
Kitano, H.1
-
4
-
-
27744568481
-
The plasmodium protein network diverges from those of other eukaryotes
-
Suthram, S., Sittler, T. & Ideker, T. The plasmodium protein network diverges from those of other eukaryotes. Nature 438, 108-112 (2005).
-
(2005)
Nature
, vol.438
, pp. 108-112
-
-
Suthram, S.1
Sittler, T.2
Ideker, T.3
-
5
-
-
11844263877
-
Sensing and signaling during infection in Drosophila
-
Royet, J., Reichhart, J. M. & Hoffmann, J. A. Sensing and signaling during infection in Drosophila. Curr. Opin. Immunol. 17, 11-17 (2005).
-
(2005)
Curr. Opin. Immunol.
, vol.17
, pp. 11-17
-
-
Royet, J.1
Reichhart, J.M.2
Hoffmann, J.A.3
-
7
-
-
0037022296
-
Human macrophage activation programs induced by bacterial pathogens
-
Nau, G. J. et al. Human macrophage activation programs induced by bacterial pathogens. Proc. Natl Acad. Sci. USA 99, 1503-1508 (2002).
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 1503-1508
-
-
Nau, G.J.1
-
8
-
-
0035130597
-
Target gene identification from expression array data by promoter analysis
-
Werner, T. Target gene identification from expression array data by promoter analysis. Biomol. Eng. 17, 87-94 (2001).
-
(2001)
Biomol. Eng.
, vol.17
, pp. 87-94
-
-
Werner, T.1
-
9
-
-
0035430282
-
Transcriptional regulation by the phosphorylation-dependent factor CREB
-
Mayr, B. & Montminy, M. Transcriptional regulation by the phosphorylation-dependent factor CREB. Nature Rev. Mol. Cell Biol. 2, 599-609 (2001).
-
(2001)
Nature Rev. Mol. Cell Biol.
, vol.2
, pp. 599-609
-
-
Mayr, B.1
Montminy, M.2
-
10
-
-
22744442218
-
Activating transcription factor 3, a stress sensor, activates p53 by blocking its ubiquitination
-
Yan, C., Lu, D., Hai, T. & Boyd, D. D. Activating transcription factor 3, a stress sensor, activates p53 by blocking its ubiquitination. EMBO J. 24, 2425-2435 (2005).
-
(2005)
EMBO J.
, vol.24
, pp. 2425-2435
-
-
Yan, C.1
Lu, D.2
Hai, T.3
Boyd, D.D.4
-
11
-
-
0030020617
-
Identification of genes differentially expressed in B16 murine melanoma sublines with different metastatic potentials
-
Ishiguro, T. et al. Identification of genes differentially expressed in B16 murine melanoma sublines with different metastatic potentials. Cancer Res. 56, 875-879 (1996).
-
(1996)
Cancer Res.
, vol.56
, pp. 875-879
-
-
Ishiguro, T.1
-
12
-
-
0033855711
-
Inhibitory effect of ATF3 antisense oligonucleotide on ectopic growth of HT29 human colon cancer cells
-
Ishiguro, T., Nagawa, H., Naito, M. & Tsuruo, T. Inhibitory effect of ATF3 antisense oligonucleotide on ectopic growth of HT29 human colon cancer cells. Jpn. J. Cancer Res. 91, 833-836 (2000).
-
(2000)
Jpn. J. Cancer Res.
, vol.91
, pp. 833-836
-
-
Ishiguro, T.1
Nagawa, H.2
Naito, M.3
Tsuruo, T.4
-
13
-
-
0037064094
-
Transcriptional repressor activating transcription factor 3 protects human umbilical vein endothelial cells from tumor necrosis factor-α- induced apoptosis through down-regulation of p53 transcription
-
Kawauchi, J. et al. Transcriptional repressor activating transcription factor 3 protects human umbilical vein endothelial cells from tumor necrosis factor-α-induced apoptosis through down-regulation of p53 transcription. J. Biol. Chem. 277, 39025-39034 (2002).
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 39025-39034
-
-
Kawauchi, J.1
-
14
-
-
2942718697
-
Role for activating transcription factor 3 in stress-induced beta-cell apoptosis
-
Hartman, M. G. et al. Role for activating transcription factor 3 in stress-induced beta-cell apoptosis. Mol. Cell. Biol. 24, 5721-5732 (2004).
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 5721-5732
-
-
Hartman, M.G.1
-
15
-
-
0242490780
-
Cytoscape: A software environment for integrated models of biomolecular interaction networks
-
Shannon, P. et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res. 13, 2498-2504 (2003).
-
(2003)
Genome Res.
, vol.13
, pp. 2498-2504
-
-
Shannon, P.1
-
16
-
-
25644447513
-
Reverse engineering galactose regulation in yeast through model selection
-
Thorsson, V. T., Hörnquist, M., Siegel, A. F. & Hood, L. Reverse engineering galactose regulation in yeast through model selection. Stat. Appl. Gen. Mol. Biol. 4, 1-24 (2005).
-
(2005)
Stat. Appl. Gen. Mol. Biol.
, vol.4
, pp. 1-24
-
-
Thorsson, V.T.1
Hörnquist, M.2
Siegel, A.F.3
Hood, L.4
-
17
-
-
33747813561
-
The Inferelator: An algorithm for learning parsimonious regulatory networks from systems-biology data-sets de novo
-
Bonneau, R. et al. The Inferelator: an algorithm for learning parsimonious regulatory networks from systems-biology data-sets de novo. Genome Biol. 7, R36-R42 (2006).
-
(2006)
Genome Biol.
, vol.7
-
-
Bonneau, R.1
-
18
-
-
33644977499
-
A splice variant of stress response gene ATF3 counteracts NF-κB-dependent anti-apoptosis through inhibiting recruitment of CREB-binding protein/p300 coactivator
-
Hua, B. et al. A splice variant of stress response gene ATF3 counteracts NF-κB-dependent anti-apoptosis through inhibiting recruitment of CREB-binding protein/p300 coactivator. J. Biol. Chem. 281, 1620-1629 (2006).
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 1620-1629
-
-
Hua, B.1
-
19
-
-
27444436736
-
Sox9 and p300 cooperatively regulate chromatin-mediated transcription
-
Furumatsu, T. et al. Sox9 and p300 cooperatively regulate chromatin-mediated transcription. J. Biol. Chem. 280, 35203-35208 (2005).
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 35203-35208
-
-
Furumatsu, T.1
-
20
-
-
3142517713
-
Expression, localization, and regulation of NOS in human mast cell lines: Effects on leukotriene production
-
Gilchrist, M., McCauley, S. D. & Befus, A. D. Expression, localization, and regulation of NOS in human mast cell lines: effects on leukotriene production. Blood 104, 462-469 (2004).
-
(2004)
Blood
, vol.104
, pp. 462-469
-
-
Gilchrist, M.1
McCauley, S.D.2
Befus, A.D.3
-
21
-
-
0036191009
-
INCLUSive: INtegrated Clustering, Upstream sequence retrieval and motif Sampling
-
Thijs, G. et al. INCLUSive: INtegrated Clustering, Upstream sequence retrieval and motif Sampling. Bioinformatics 18, 331-332 (2002).
-
(2002)
Bioinformatics
, vol.18
, pp. 331-332
-
-
Thijs, G.1
-
22
-
-
2542584654
-
Detection of functional DNA motifs via statistical over-representation
-
Frith, M. C. et al. Detection of functional DNA motifs via statistical over-representation. Nucleic Acids Res. 32, 1372-1381 (2004).
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1372-1381
-
-
Frith, M.C.1
-
23
-
-
0037208166
-
TRANSFAC: Transcriptional regulation, from patterns to profiles
-
Matys, V. et al. TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Res. 31, 374-378 (2003).
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 374-378
-
-
Matys, V.1
-
24
-
-
0012306021
-
Apollo: A sequence annotation editor
-
research0082
-
Lewis, S. E. et al. Apollo: a sequence annotation editor. Genome Biol. 3, research0082 (2002).
-
(2002)
Genome Biol.
, vol.3
-
-
Lewis, S.E.1
-
25
-
-
0041523923
-
Decay rates of human mRNAs: Correlation with functional characteristics and sequence attributes
-
Yang, E. et al. Decay rates of human mRNAs: correlation with functional characteristics and sequence attributes. Genome Res. 13, 1863-1872 (2003).
-
(2003)
Genome Res.
, vol.13
, pp. 1863-1872
-
-
Yang, E.1
-
26
-
-
10744226888
-
Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs
-
Cawley, S. et al. Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs. Cell 116, 499-509 (2004).
-
(2004)
Cell
, vol.116
, pp. 499-509
-
-
Cawley, S.1
-
27
-
-
23844519339
-
A high-resolution map of active promoters in the human genome
-
Kim, T. H. et al. A high-resolution map of active promoters in the human genome. Nature 436, 876-880 (2005).
-
(2005)
Nature
, vol.436
, pp. 876-880
-
-
Kim, T.H.1
|