Homodimerization of the G protein SRβ in the nucleotide-free state involves proline cis/trans isomerization in the switch II region

Proceedings of the National Academy of Sciences of the United States of America

Volumn 103, Issue 18, 2006, Pages 6823-6828

  Schwartz, Thomas U ^a,b   Schmidt, Daniel ^b   Brohawn, Stephen G ^a   Blobel, Günter ^b  

^a MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^b ROCKEFELLER UNIVERSITY   (United States)

Author keywords

Cotranslational transport; Proline isomerization; Signal recognition particle receptor

Indexed keywords

DOCKING PROTEIN; DOCKING PROTEIN ALPHA; DOCKING PROTEIN BETA; GUANINE NUCLEOTIDE BINDING PROTEIN; PROLINE; SIGNAL PEPTIDE; SIGNAL RECOGNITION PARTICLE; UNCLASSIFIED DRUG;

ARTICLE; DIMERIZATION; EUKARYOTE; ISOMERIZATION; PRIORITY JOURNAL; PROTEIN PURIFICATION; PROTEIN STRUCTURE; PROTEIN TRANSPORT; SEQUENCE ALIGNMENT;

AMINO ACID SEQUENCE; ANIMALS; CRYSTALLOGRAPHY, X-RAY; DIMERIZATION; HUMANS; ISOMERISM; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PROLINE; PROTEIN STRUCTURE, QUATERNARY; PROTEIN SUBUNITS; RECEPTORS, CYTOPLASMIC AND NUCLEAR; RECEPTORS, PEPTIDE; SACCHAROMYCES CEREVISIAE; SEQUENCE ALIGNMENT;

EUKARYOTA;

EID: 33646530528     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0602083103     Document Type: Article

References (47)

1. Keenan, R. J., Freymann, D. M., Stroud, R. M. & Walter, P. (2001) Annu. Rev. Biochem. 70, 755-775.
2. Tajima, S., Lauffer, L., Rath, V. L. & Walter, P. (1986) J. Cell Biol. 103, 1167-1178.
3. Gilmore, R., Walter, P. & Blobel, G. (1982) J. Cell Biol. 95, 470-477.
4. Snapp, E. L., Reinhart, G. A., Bogert, B. A., Lippincott-Schwartz, J. & Hegde, R. S. (2004) J. Cell Biol. 164, 997-1007.
5. Simon, S. M. & Blobel, G. (1991) Cell 65, 371-380.
6. Van den Berg, B., Clemons, W. M., Jr., Collinson, I., Modis, Y., Hartmann, E., Harrison, S. C. & Rapoport, T. A. (2004) Nature 427, 36-44.
7. Song, W., Raden, D., Mandon, E. C. & Gilmore, R. (2000) Cell 100, 333-343.
8. Bacher, G., Pool, M. & Dobberstein, B. (1999) J. Cell Biol. 146, 723-730.
9. Nagai, K., Oubridge, C., Kuglstatter, A., Menichelli, E., Isel, C. & Jovine, L. (2003) EMBO J. 22, 3479-3485.
10. Doudna, J. A. & Batey, R. T. (2004) Annu. Rev. Biochem. 73, 539-557.
11. Halic, M., Becker, T., Pool, M. R., Spahn, C. M., Grassucci, R. A., Frank, J. & Beckmann, R. (2004) Nature 427, 808-814.
12. Egea, P. F., Shan, S. O., Napetschnig, J., Savage, D. F., Walter, P. & Stroud, R. M. (2004) Nature 427, 215-221.
13. Focia, P. J., Shepotinovskaya, I. V., Seidler, J. A. & Freymann, D. M. (2004) Science 303, 373-377.
14. Pool, M. R., Stumm, J., Fulga, T. A., Sinning, I. & Dobberstein, B. (2002) Science 297, 1345-1348.
15. Miller, J. D., Tajima, S., Lauffer, L. & Walter, P. (1995) J. Cell Biol. 128, 273-282.
16. Schwartz, T. & Blobel, G. (2003) Cell 112, 793-803.
17. Ogg, S. C., Barz, W. P. & Walter, P. (1998) J. Cell Biol. 142, 341-354.
18. Schwartz, T. U., Walczak, R. & Blobel, G. (2004) Protein Sci. 13, 2814-2818.
19. John, J., Sohmen, R., Feuerstein, J., Linke, R., Wittinghofer, A. & Goody, R. S. (1990) Biochemistry 29, 6058-6065.
20. Dreusicke, D. & Schulz, G. E. (1986) FEBS Lett. 208, 301-304.
21. Chen, X., Court, D. L. & Ji, X. (1999) Proc. Natl. Acad. Sci. USA 96, 8396-8401.
22. Scheffzek, K., Kabsch, W., Schlichting, I., Pai, E. F., Lautwein, A., Frech, M., Wittinghofer, A. & Goody, R. S. (1994) Acta Crystallogr. 50, 521-526.
23. Londesborough, J. & Vuorio, O. E. (1993) Eur. J. Biochem. 216, 841-848.
24. Liu, Y. & Eisenberg, D. (2002) Protein Sci. 11, 1285-1299.
25. Rousseau, F., Schymkowitz, J. W. & Itzhaki, L. S. (2003) Structure (London) 11, 243-251.
26. Mizuno, H., Fujimoto, Z., Koizumi, M., Kano, H., Atoda, H. & Morita, T. (1997) Nat. Struct. Biol. 4, 438-441.
27. Limacher, A., Kloer, D. P., Flockiger, S., Folkers, G., Crameri, R. & Scapozza, L. (2006) Structure (London) 14, 185-195.
28. Bahadur, R. P., Chakrabarti, P., Rodier, F. & Janin, J. (2004) J. Mol. Biol. 336, 943-955.
29. Legate, K. R. & Andrews, D. W. (2003) J. Biol. Chem. 278, 27712-27720.
30. Pearson, M. A., Karplus, P. A., Dodge, R. W., Laity, J. H. & Scheraga, H. A. (1998) Protein Sci. 7, 1255-1258.
31. Tweedy, N. B., Nair, S. K., Paterno, S. A., Fierke, C. A. & Christianson, D. W. (1993) Biochemistry 32, 10944-10949.
32. Vetter, I. R. & Wittinghofer, A. (2001) Science 294, 1299-1304.
33. Jekely, G. (2003) BioEssays 25, 1129-1138.
34. Patil, C. & Walter, P. (2001) Curr. Opin. Cell Biol. 13, 349-355.
35. Ma, Y. & Hendershot, L. M. (2001) Cell 107, 827-830.
36. Schnell, D. J. & Hebert, D. N. (2003) Cell 112, 491-505.
37. Weibel, P., Hiltbrunner, A., Brand, L. & Kessler, F. (2003) J. Biol. Chem. 278, 37321-37329.
38. Sun, Y. J., Forouhar, F., Li Hm, H. M., Tu, S. L., Yen, Y. H., Kao, S., Shr, H. L., Chou, C. C., Chen, C. & Hsiao, C. D. (2002) Nat. Struct. Biol. 9, 95-100.
39. Andreotti, A. H. (2003) Biochemistry 42, 9515-9524.
40. Schmid, F. X. (1993) Annu. Rev. Biophys. Biomol. Struct. 22, 123-142.
41. Neuhard, J. & Nygaard, P. (1987) in Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology, ed. Neidhardt, F. C. (Am. Soc. Microbiol., Washington, DC), pp. 445-473.
42. Helmers, J., Schmidt, D., Glavy, J. S., Blobel, G. & Schwartz, T. (2003) J. Biol. Chem. 278, 23686-23690.
43. Pasqualato, S., Menetrey, J., Franco, M. & Cherfils, J. (2001) EMBO Rep. 2, 234-238.
44. Collaborative Computational Project 4 (CCP4), (1994) Acta Crystallogr. D 50, 760-763.
45. Brunger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Pannu, N. S., et al. (1998) Acta Crystallogr. D 54, 905-921.
46. Emsley, P. & Cowtan, K. (2004) Acta Crystallogr. D 60, 2126-2132.
47. Lovell, S. C., Davis, I. W., Arendall, W. B., III, de Bakker, P. I., Word, J. M., Prisant, M. G., Richardson, J. S. & Richardson, D. C. (2003) Proteins 50, 437-450.