메뉴 건너뛰기




Volumn 87, Issue 5, 2006, Pages 1163-1173

Phylogenetic analysis of the precore/core gene of hepatitis B virus genotypes E and A in West Africa: New subtypes, mixed infections and recombinations

Author keywords

[No Author keywords available]

Indexed keywords

CORE PROTEIN;

EID: 33646147584     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/vir.0.81614-0     Document Type: Article
Times cited : (130)

References (39)
  • 2
    • 0037443552 scopus 로고    scopus 로고
    • The risk of hepatitis B virus infection by transfusion in Kumasi, Ghana
    • & 8 other authors
    • Allain, J.-P., Candotti, D., Soldan, K. & 8 other authors (2003). The risk of hepatitis B virus infection by transfusion in Kumasi, Ghana. Blood 101, 2419-2425.
    • (2003) Blood , vol.101 , pp. 2419-2425
    • Allain, J.-P.1    Candotti, D.2    Soldan, K.3
  • 3
    • 0030843415 scopus 로고    scopus 로고
    • Molecular epidemiology of hepatitis B virus in Central America reflected in the genetic variability of the small S gene
    • Arauz-Ruiz, P., Norder, H., Visona, K. A. & Magnius, L. O. (1997). Molecular epidemiology of hepatitis B virus in Central America reflected in the genetic variability of the small S gene. J Infect Dis 176, 851-858.
    • (1997) J Infect Dis , vol.176 , pp. 851-858
    • Arauz-Ruiz, P.1    Norder, H.2    Visona, K.A.3    Magnius, L.O.4
  • 4
    • 0033020624 scopus 로고    scopus 로고
    • + mutations in the basic core promoter of hepatitis B virus isolated from black Africans with hepatocellular carcinoma compared with asymptomatic carriers
    • + mutations in the basic core promoter of hepatitis B virus isolated from black Africans with hepatocellular carcinoma compared with asymptomatic carriers. Hepatology 29, 946-953.
    • (1999) Hepatology , vol.29 , pp. 946-953
    • Baptista, M.1    Kramvis, A.2    Kew, M.C.3
  • 5
    • 0019451351 scopus 로고
    • Hepatocellular carcinoma and hepatitis B virus: A prospective study of 22 707 men in Taiwan
    • Beasley, R. P., Hwang, L.-Y., Lin, C.-C. & Chien, C.-S. (1981a). Hepatocellular carcinoma and hepatitis B virus: a prospective study of 22 707 men in Taiwan. Lancet ii, 1129-1133.
    • (1981) Lancet , vol.2 , pp. 1129-1133
    • Beasley, R.P.1    Hwang, L.-Y.2    Lin, C.-C.3    Chien, C.-S.4
  • 6
    • 0019502589 scopus 로고
    • Hepatitis B immune globulin (HBIG) efficacy in the interruption of perinatal transmission of hepatitis B virus carrier state: Initial report of a randomised double-blind placebo-controlled trial
    • Beasley, R. P., Hwang, L.-Y., Lin, C.-C., Stevens, C. E., Wang, K.-Y., Sun, T.-S., Hsieh, F.-J. & Szmuness, W. (1981b). Hepatitis B immune globulin (HBIG) efficacy in the interruption of perinatal transmission of hepatitis B virus carrier state: initial report of a randomised double-blind placebo-controlled trial. Lancet ii, 388-393.
    • (1981) Lancet , vol.2 , pp. 388-393
    • Beasley, R.P.1    Hwang, L.-Y.2    Lin, C.-C.3    Stevens, C.E.4    Wang, K.-Y.5    Sun, T.-S.6    Hsieh, F.-J.7    Szmuness, W.8
  • 7
    • 0033984724 scopus 로고    scopus 로고
    • Relationships within and between genotypes of hepatitis B virus at points across the genome: Footprints of recombination in certain isolates
    • Bowyer, S. M. & Sim, J. G. M. (2000). Relationships within and between genotypes of hepatitis B virus at points across the genome: footprints of recombination in certain isolates. J Gen Virol 81, 379-392.
    • (2000) J Gen Virol , vol.81 , pp. 379-392
    • Bowyer, S.M.1    Sim, J.G.M.2
  • 8
    • 0030822839 scopus 로고    scopus 로고
    • A unique segment of the hepatitis B virus group A genotype identified in isolates from South Africa
    • Bowyer, S. M., van Staden, L., Kew, M. C. & Sim, J. G. M. (1997). A unique segment of the hepatitis B virus group A genotype identified in isolates from South Africa. J Gen Virol 78, 1719-1729.
    • (1997) J Gen Virol , vol.78 , pp. 1719-1729
    • Bowyer, S.M.1    van Staden, L.2    Kew, M.C.3    Sim, J.G.M.4
  • 9
    • 0021858507 scopus 로고
    • Natural history of chronic hepatitis B virus infection in Taiwan: Studies of hepatitis B virus DNA in serum
    • Chu, C. M., Karayiannis, P., Fowler, M. J., Monjardino, J., Liaw, Y. F. & Thomas, H. C. (1985). Natural history of chronic hepatitis B virus infection in Taiwan: studies of hepatitis B virus DNA in serum. Hepatology 5, 431-434.
    • (1985) Hepatology , vol.5 , pp. 431-434
    • Chu, C.M.1    Karayiannis, P.2    Fowler, M.J.3    Monjardino, J.4    Liaw, Y.F.5    Thomas, H.C.6
  • 11
    • 0024316283 scopus 로고
    • Mutation rate of the hepadnavirus genome
    • Girones, R. & Miller, R. H. (1989). Mutation rate of the hepadnavirus genome. Virology 170, 595-597.
    • (1989) Virology , vol.170 , pp. 595-597
    • Girones, R.1    Miller, R.H.2
  • 12
    • 0031297068 scopus 로고    scopus 로고
    • Variations of hepatitis B virus core gene sequence in Western patients with chronic hepatitis B virus infection
    • Gray, A. H., Fang, J. W., Davis, G. L., Mizokami, M., Wu, P. C., Williams, R., Schuster, S. M. & Lau, J. Y. (1997). Variations of hepatitis B virus core gene sequence in Western patients with chronic hepatitis B virus infection. J Viral Hepat 4, 371-378.
    • (1997) J Viral Hepat , vol.4 , pp. 371-378
    • Gray, A.H.1    Fang, J.W.2    Davis, G.L.3    Mizokami, M.4    Wu, P.C.5    Williams, R.6    Schuster, S.M.7    Lau, J.Y.8
  • 13
    • 0033976871 scopus 로고    scopus 로고
    • Long-term mutation rates in the hepatitis B virus genome
    • Hannoun, C., Horal, P. & Lindh, M. (2000). Long-term mutation rates in the hepatitis B virus genome. J Gen Virol 81, 75-83.
    • (2000) J Gen Virol , vol.81 , pp. 75-83
    • Hannoun, C.1    Horal, P.2    Lindh, M.3
  • 14
    • 0037105688 scopus 로고    scopus 로고
    • Genotype mixtures of hepatitis B virus in patients treated with interferon
    • Hannoun, C., Krogsgaard, K., Horal, P. & Lindh, M. (2002). Genotype mixtures of hepatitis B virus in patients treated with interferon. J Infect Dis 186, 752-759.
    • (2002) J Infect Dis , vol.186 , pp. 752-759
    • Hannoun, C.1    Krogsgaard, K.2    Horal, P.3    Lindh, M.4
  • 15
    • 23044471836 scopus 로고    scopus 로고
    • Phylogeny of African complete genomes reveals a West African genotype A subtype of hepatitis B virus and relatedness between Somali and Asian A1 sequences
    • Hannoun, C., Söderström, A., Norkrans, G. & Lindh, M. (2005). Phylogeny of African complete genomes reveals a West African genotype A subtype of hepatitis B virus and relatedness between Somali and Asian A1 sequences. J Gen Virol 86, 2163-2167.
    • (2005) J Gen Virol , vol.86 , pp. 2163-2167
    • Hannoun, C.1    Söderström, A.2    Norkrans, G.3    Lindh, M.4
  • 16
    • 3142775010 scopus 로고    scopus 로고
    • Novel hepatitis B virus genotype A subtyping assay that distinguishes subtype Aa from Ae and its application in epidemiological studies
    • & 7 other authors
    • Hasegawa, I., Tanaka, Y., Kramvis, A. & 7 other authors (2004). Novel hepatitis B virus genotype A subtyping assay that distinguishes subtype Aa from Ae and its application in epidemiological studies. J Virol 78, 7575-7581.
    • (2004) J Virol , vol.78 , pp. 7575-7581
    • Hasegawa, I.1    Tanaka, Y.2    Kramvis, A.3
  • 17
    • 0029115078 scopus 로고
    • Global programme for control of hepatitis B infection
    • Kane, M. (1995). Global programme for control of hepatitis B infection. Vaccine 13 (Suppl. 1), S47-S49.
    • (1995) Vaccine , vol.13 , Issue.SUPPL. 1
    • Kane, M.1
  • 18
    • 84984537562 scopus 로고    scopus 로고
    • Clinical and virological aspects of blood donors infected with hepatitis B virus genotypes B and C
    • Kao, J.-H., Chen, P.-J., Lai, M.-Y. & Chen, D.-S. (2002). Clinical and virological aspects of blood donors infected with hepatitis B virus genotypes B and C. J Clin Microbiol 40, 22-25.
    • (2002) J Clin Microbiol , vol.40 , pp. 22-25
    • Kao, J.-H.1    Chen, P.-J.2    Lai, M.-Y.3    Chen, D.-S.4
  • 19
    • 0036102083 scopus 로고    scopus 로고
    • Characteristics of hepatitis B virus isolates of genotype G and their phylogenetic differences from the other six genotypes (A through F)
    • Kato, H., Orito, E., Gish, R. G., Sugauchi, F., Suzuki, S., Ueda, R., Miyakawa, Y. & Mizokami, M. (2002). Characteristics of hepatitis B virus isolates of genotype G and their phylogenetic differences from the other six genotypes (A through F). J Virol 76, 6131-6137.
    • (2002) J Virol , vol.76 , pp. 6131-6137
    • Kato, H.1    Orito, E.2    Gish, R.G.3    Sugauchi, F.4    Suzuki, S.5    Ueda, R.6    Miyakawa, Y.7    Mizokami, M.8
  • 20
    • 0029123475 scopus 로고
    • The hepatitis B virus X gene: Analysis of functional domain variation and gene phylogeny using multiple sequences
    • Kidd-Ljunggren, K., Öberg, M. & Kidd, A. H. (1995). The hepatitis B virus X gene: analysis of functional domain variation and gene phylogeny using multiple sequences. J Gen Virol 76, 2119-2130.
    • (1995) J Gen Virol , vol.76 , pp. 2119-2130
    • Kidd-Ljunggren, K.1    Öberg, M.2    Kidd, A.H.3
  • 21
    • 23044484343 scopus 로고    scopus 로고
    • Full genome analysis of hepatitis B virus genotype E strains from South-Western Africa and Madagascar reveals low genetic variability
    • Kramvis, A., Restorp, K., Norder, H., Botha, J. F., Magnius, L. O. & Kew, M. C. (2005). Full genome analysis of hepatitis B virus genotype E strains from South-Western Africa and Madagascar reveals low genetic variability. J Med Virol 77, 47-52.
    • (2005) J Med Virol , vol.77 , pp. 47-52
    • Kramvis, A.1    Restorp, K.2    Norder, H.3    Botha, J.F.4    Magnius, L.O.5    Kew, M.C.6
  • 22
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 23
    • 21444439602 scopus 로고    scopus 로고
    • A new subtype (subgenotype) Ac (A3) of hepatitis B virus and recombination between genotypes A and E in Cameroon
    • & 11 other authors
    • Kurbanov, F., Tanaka, Y., Fujiwara, K. & 11 other authors (2005). A new subtype (subgenotype) Ac (A3) of hepatitis B virus and recombination between genotypes A and E in Cameroon. J Gen Virol 86, 2047-2056.
    • (2005) J Gen Virol , vol.86 , pp. 2047-2056
    • Kurbanov, F.1    Tanaka, Y.2    Fujiwara, K.3
  • 24
    • 0035028720 scopus 로고    scopus 로고
    • Wide variety of genotypes and geographic origins of hepatitis B virus in Belgian children
    • Liu, H.-F., Sokal, E. & Goubau, P. (2001). Wide variety of genotypes and geographic origins of hepatitis B virus in Belgian children. J Pediatr Gastroenterol Nutr 32, 274-277.
    • (2001) J Pediatr Gastroenterol Nutr , vol.32 , pp. 274-277
    • Liu, H.-F.1    Sokal, E.2    Goubau, P.3
  • 25
    • 0028877043 scopus 로고
    • Subtypes, genotypes and molecular epidemiology of the hepatitis B virus as reflected by sequence variability of the S-gene
    • Magnius, L. O. & Norder, H. (1995). Subtypes, genotypes and molecular epidemiology of the hepatitis B virus as reflected by sequence variability of the S-gene. Intervirology 38, 24-34.
    • (1995) Intervirology , vol.38 , pp. 24-34
    • Magnius, L.O.1    Norder, H.2
  • 26
    • 0030455289 scopus 로고    scopus 로고
    • Pathogenesis of chronic liver disease in patients with chronic hepatitis B virus infection without serum HBeAg
    • Mangia, A., Chung, Y. H., Hoofnagle, J. H., Birkenmeyer, L., Mushahwar, I. & Di Bisceglie, A. M. (1996). Pathogenesis of chronic liver disease in patients with chronic hepatitis B virus infection without serum HBeAg. Dig Dis Sci 41, 2447-2452.
    • (1996) Dig Dis Sci , vol.41 , pp. 2447-2452
    • Mangia, A.1    Chung, Y.H.2    Hoofnagle, J.H.3    Birkenmeyer, L.4    Mushahwar, I.5    Di Bisceglie, A.M.6
  • 27
    • 0029788903 scopus 로고    scopus 로고
    • Precore/core mutations of hepatitis B virus in hepatocellular carcinomas developed on noncirrhotic livers
    • Minami, M., Poussin, K., Kew, M., Okanoue, T., Brechot, C. & Paterlini, P. (1996). Precore/core mutations of hepatitis B virus in hepatocellular carcinomas developed on noncirrhotic livers. Gastroenterology 111, 691-700.
    • (1996) Gastroenterology , vol.111 , pp. 691-700
    • Minami, M.1    Poussin, K.2    Kew, M.3    Okanoue, T.4    Brechot, C.5    Paterlini, P.6
  • 28
    • 3242699041 scopus 로고    scopus 로고
    • Low genetic diversity despite hyperendemicity of hepatitis B virus genotype E throughout West Africa
    • & 12 other authors
    • Mulders, M. N., Venard, V., Njayou, M. & 12 other authors (2004). Low genetic diversity despite hyperendemicity of hepatitis B virus genotype E throughout West Africa. J Infect Dis 190, 400-408.
    • (2004) J Infect Dis , vol.190 , pp. 400-408
    • Mulders, M.N.1    Venard, V.2    Njayou, M.3
  • 29
    • 0028301224 scopus 로고
    • Complete genomes, phylogenetic relatedness, and structural proteins of six strains of the hepatitis B virus, four of which represent two new genotypes
    • Norder, H., Couroucé, A.-M. & Magnius, L. O. (1994). Complete genomes, phylogenetic relatedness, and structural proteins of six strains of the hepatitis B virus, four of which represent two new genotypes. Virology 198, 489-503.
    • (1994) Virology , vol.198 , pp. 489-503
    • Norder, H.1    Couroucé, A.-M.2    Magnius, L.O.3
  • 30
    • 0034788190 scopus 로고    scopus 로고
    • Phylogenetic analysis of new hepatitis B virus isolates from Nigeria supports endemicity of genotype E in West Africa
    • Odemuyiwa, S. O., Mulders, M. N., Oyedele, O. I., Ola, S. O., Odaibo, G. N., Olaleye, D. O. & Muller, C. P. (2001). Phylogenetic analysis of new hepatitis B virus isolates from Nigeria supports endemicity of genotype E in West Africa. J Med Virol 65, 463-469.
    • (2001) J Med Virol , vol.65 , pp. 463-469
    • Odemuyiwa, S.O.1    Mulders, M.N.2    Oyedele, O.I.3    Ola, S.O.4    Odaibo, G.N.5    Olaleye, D.O.6    Muller, C.P.7
  • 31
    • 0023260169 scopus 로고
    • Point mutation in the S gene of hepatitis B virus for a d/y or w/r subtypic change in two blood donors carrying a surface antigen of compound subtype adyr or adwr
    • Okamoto, H., Imai, M., Tsuda, F., Tanaka, T., Miyakawa, Y. & Mayumi, M. (1987). Point mutation in the S gene of hepatitis B virus for a d/y or w/ r subtypic change in two blood donors carrying a surface antigen of compound subtype adyr or adwr. J Virol 61, 3030-3034.
    • (1987) J Virol , vol.61 , pp. 3030-3034
    • Okamoto, H.1    Imai, M.2    Tsuda, F.3    Tanaka, T.4    Miyakawa, Y.5    Mayumi, M.6
  • 33
    • 0345653993 scopus 로고
    • Host-independent evolution and a genetic classification of the hepadnavirus family based on nucleotide sequences
    • Orito, E., Mizokami, M., Ina, Y., Moriyama, E. N., Kameshima, N., Yamamoto, M. & Gojobori, T. (1989). Host-independent evolution and a genetic classification of the hepadnavirus family based on nucleotide sequences. Proc Natl Acad Sci U S A 86, 7059-7062.
    • (1989) Proc Natl Acad Sci U S A , vol.86 , pp. 7059-7062
    • Orito, E.1    Mizokami, M.2    Ina, Y.3    Moriyama, E.N.4    Kameshima, N.5    Yamamoto, M.6    Gojobori, T.7
  • 34
    • 0034800636 scopus 로고    scopus 로고
    • Molecular analysis of hepatitis B virus genomes isolated from black African patients with fulminant hepatitis B
    • Owiredu, W. K. B. A., Kramvis, A. & Kew, M. C. (2001). Molecular analysis of hepatitis B virus genomes isolated from black African patients with fulminant hepatitis B. J Med Virol 65, 485-492.
    • (2001) J Med Virol , vol.65 , pp. 485-492
    • Owiredu, W.K.B.A.1    Kramvis, A.2    Kew, M.C.3
  • 35
    • 0036093152 scopus 로고    scopus 로고
    • Primate hepatitis B viruses - Genetic diversity, geography and evolution
    • Robertson, B. H. & Margolis, H. S. (2002). Primate hepatitis B viruses - genetic diversity, geography and evolution. Rev Med Virol 12, 133-141.
    • (2002) Rev Med Virol , vol.12 , pp. 133-141
    • Robertson, B.H.1    Margolis, H.S.2
  • 37
    • 0037399878 scopus 로고    scopus 로고
    • Distribution of hepatitis B virus (HBV) genotypes among HBV carriers in the Cote d'Ivoire: Complete genome sequence and phylogenetic relatedness of HBV genotype E
    • & 9 other authors
    • Suzuki, S., Sugauchi, F., Orito, E. & 9 other authors (2003). Distribution of hepatitis B virus (HBV) genotypes among HBV carriers in the Cote d'Ivoire: complete genome sequence and phylogenetic relatedness of HBV genotype E. J Med Virol 69, 459-465.
    • (2003) J Med Virol , vol.69 , pp. 459-465
    • Suzuki, S.1    Sugauchi, F.2    Orito, E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.