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Volumn 22, Issue 9, 2006, Pages 1103-1110

Algorithm to find gene expression profiles of deregulation and identify families of disease-altered genes

Author keywords

[No Author keywords available]

Indexed keywords

ANALYTIC METHOD; ARTICLE; CANCER PATIENT; CONTROLLED STUDY; EXPERIMENTAL STUDY; GENE EXPRESSION PROFILING; GENE IDENTIFICATION; GENETIC ALGORITHM; GENETIC REGULATION; HUMAN; MICROARRAY ANALYSIS; MULTIGENE FAMILY; PRIORITY JOURNAL; PROMYELOCYTIC LEUKEMIA; SAMPLE; STATISTICAL ANALYSIS;

EID: 33646145739     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btl053     Document Type: Article
Times cited : (22)

References (26)
  • 1
    • 2342439256 scopus 로고    scopus 로고
    • Comparative analysis of algorithms for signal quanfitation from oligonucleotide microarrays
    • Barash,Y. et al. (2004) Comparative analysis of algorithms for signal quanfitation from oligonucleotide microarrays. Bioinformatics, 20, 839-846.
    • (2004) Bioinformatics , vol.20 , pp. 839-846
    • Barash, Y.1
  • 2
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini,Y. and Hochberg,Y. (1995) Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. R. Statist. Soc. Ser. B, 57, 289-300.
    • (1995) J. R. Statist. Soc. Ser. B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 3
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    • Bolstad,B.M. et al. (2003) A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics, 19, 185-193.
    • (2003) Bioinformatics , vol.19 , pp. 185-193
    • Bolstad, B.M.1
  • 4
    • 0002398469 scopus 로고
    • Teoria statistica delle classi e calcolo delle probabilita
    • Universita di Firenza, Italy
    • Bonferroni,C.E. (1937) Teoria statistica delle classi e calcolo delle probabilita. In Volume in Onore di Ricarrdo dalla Volta. Universita di Firenza, Italy, pp. 1-62.
    • (1937) Volume in Onore Di Ricarrdo Dalla Volta , pp. 1-62
    • Bonferroni, C.E.1
  • 6
    • 0037709918 scopus 로고    scopus 로고
    • Supervised clustering of genes
    • RESEARCH0069
    • Dettling,M. and Buhlmann,P. (2002) Supervised clustering of genes. Genome Biol., 3, RESEARCH0069.
    • (2002) Genome Biol. , vol.3
    • Dettling, M.1    Buhlmann, P.2
  • 8
    • 1542784653 scopus 로고    scopus 로고
    • Empirical Bayes analysis of a microarray experiment
    • Efron,B. et al. (2001) Empirical Bayes analysis of a microarray experiment. J. Am. Stat. Assoc., 96, 1151-1160.
    • (2001) J. Am. Stat. Assoc. , vol.96 , pp. 1151-1160
    • Efron, B.1
  • 9
    • 0032441150 scopus 로고    scopus 로고
    • Cluster analysis and display of genome-wide expression patterns
    • Eisen,M.B. et al. (1998) Cluster analysis and display of genome-wide expression patterns. Proc. Natl Acad. Sci. USA, 95, 14863-14868.
    • (1998) Proc. Natl Acad. Sci. USA , vol.95 , pp. 14863-14868
    • Eisen, M.B.1
  • 10
    • 0033569406 scopus 로고    scopus 로고
    • Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
    • Golub,T.R. et al. (1999) Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring. Science, 286, 531-537.
    • (1999) Science , vol.286 , pp. 531-537
    • Golub, T.R.1
  • 11
    • 0346801873 scopus 로고    scopus 로고
    • The Gene Ontology (GO) database and informatics resource
    • Harris,M.A. et al. (2004) The Gene Ontology (GO) database and informatics resource. Nucleic Acids Res., 32, D258-D261.
    • (2004) Nucleic Acids Res. , vol.32
    • Harris, M.A.1
  • 14
    • 12344280017 scopus 로고    scopus 로고
    • Summaries of Affymetrix GeneChip probe level data
    • Irizarry,R.A. et al. (2003a) Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Res., 31, e15.
    • (2003) Nucleic Acids Res. , vol.31
    • Irizarry, R.A.1
  • 15
    • 0142121516 scopus 로고    scopus 로고
    • Exploration, normalization, and summaries of high density oligonucleotide array probe level data
    • Irizarry,R.A. et al. (2003b) Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics, 4, 249-264.
    • (2003) Biostatistics , vol.4 , pp. 249-264
    • Irizarry, R.A.1
  • 17
    • 21044446187 scopus 로고    scopus 로고
    • Finding disease specific alterations in the co-expression of genes
    • Kostka,D. and Spang,R. (2004) Finding disease specific alterations in the co-expression of genes. Bioinformatics, 20 (Suppl. 1), 1194-1199.
    • (2004) Bioinformatics , vol.20 , Issue.SUPPL. 1 , pp. 1194-1199
    • Kostka, D.1    Spang, R.2
  • 18
    • 0035793042 scopus 로고    scopus 로고
    • Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection
    • Li,C. and Wong,W.H. (2001) Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection. Proc. Natl Acad. Sci. USA, 98, 31-36.
    • (2001) Proc. Natl Acad. Sci. USA , vol.98 , pp. 31-36
    • Li, C.1    Wong, W.H.2
  • 19
    • 12244313858 scopus 로고    scopus 로고
    • Analysis of high density expression microarrays with signed-rank call algorithms
    • Liu,W.M. et al. (2002) Analysis of high density expression microarrays with signed-rank call algorithms. Bioinformatics, 18, 1593-1599.
    • (2002) Bioinformatics , vol.18 , pp. 1593-1599
    • Liu, W.M.1
  • 20
    • 7444234286 scopus 로고    scopus 로고
    • Getting the noise out of gene arrays
    • Marshall,E. (2004) Getting the noise out of gene arrays. Science, 306, 630-631.
    • (2004) Science , vol.306 , pp. 630-631
    • Marshall, E.1
  • 22
    • 0036682376 scopus 로고    scopus 로고
    • Meta-analysis of microarrays: Interstudy validation of gene expression profiles reveals pathway dysregulation in prostate cancer
    • Rhodes,D.R. et al. (2002) Meta-analysis of microarrays: Interstudy validation of gene expression profiles reveals pathway dysregulation in prostate cancer. Cancer Res., 62, 4427-4433.
    • (2002) Cancer Res. , vol.62 , pp. 4427-4433
    • Rhodes, D.R.1
  • 23
    • 2442446708 scopus 로고    scopus 로고
    • Genome-wide discovery of transcriptional modules from DNA sequence and gene expression
    • Segal,E. et al. (2003) Genome-wide discovery of transcriptional modules from DNA sequence and gene expression. Bioinformatics, 19 (Suppl. 1), i273-i282.
    • (2003) Bioinformatics , vol.19 , Issue.SUPPL. 1
    • Segal, E.1
  • 24
    • 0141993704 scopus 로고    scopus 로고
    • A gene-coexpression network for global discovery of conserved genetic modules
    • Stuart,J.M. et al. (2003) A gene-coexpression network for global discovery of conserved genetic modules. Science, 302, 249-255.
    • (2003) Science , vol.302 , pp. 249-255
    • Stuart, J.M.1
  • 25
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • [Erratum Proc. Natl Acad. Sci. USA, 98 10515.]
    • Tusher,V.G. et al. Significance analysis of microarrays applied to the ionizing radiation response. [Erratum (2001), Proc. Natl Acad. Sci. USA, 98 10515.]. Proc. Natl Acad. Sci. USA, 98, 5116-5121.
    • (2001) Proc. Natl Acad. Sci. USA , vol.98 , pp. 5116-5121
    • Tusher, V.G.1
  • 26
    • 0035949684 scopus 로고    scopus 로고
    • Predicting the clinical status of human breast cancer by using gene expression profiles
    • West,M. et al. (2001) Predicting the clinical status of human breast cancer by using gene expression profiles. Proc. Natl Acad. Sci. USA, 98, 11462-11467.
    • (2001) Proc. Natl Acad. Sci. USA , vol.98 , pp. 11462-11467
    • West, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.