-
1
-
-
0031035181
-
An information-intensive approach to the molecular pharmacology of cancer
-
PID: 8994024, COI: 1:CAS:528:DyaK2sXmtlCitg%3D%3D
-
Weinstein J, Myers T, O'Connor P, Friend H, Fornace A, Kohn K, Fojo T, Bates S, Rubinstein L, Anderson N, et al: An information-intensive approach to the molecular pharmacology of cancer. Science. 1997, 275: 343-349. 10.1126/science.275.5298.343. DOI: 10.1126/science.275.5298.343
-
(1997)
Science
, vol.275
, pp. 343-349
-
-
Weinstein, J.1
Myers, T.2
O'Connor, P.3
Friend, H.4
Fornace, A.5
Kohn, K.6
Fojo, T.7
Bates, S.8
Rubinstein, L.9
Anderson, N.10
-
2
-
-
0032441150
-
Cluster analysis and display of genome-wide expression patterns
-
PID: 9843981, COI: 1:CAS:528:DyaK1cXotVGmurk%3D
-
Eisen M, Spellman P, Brown P, Botstein D: Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci USA. 1998, 95: 14863-14868. 10.1073/pnas.95.25.14863. DOI: 10.1073/pnas.95.25.14863
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 14863-14868
-
-
Eisen, M.1
Spellman, P.2
Brown, P.3
Botstein, D.4
-
3
-
-
0033027794
-
Interpreting patterns of gene expression with self-organizing-maps: methods and application to hematopoietic differentiation
-
PID: 10077610, COI: 1:CAS:528:DyaK1MXhvFyks7k%3D
-
Tamayo P, Slonim D, Mesirov J, Zhu Q, Kitareewan S, Dmitrovsky E, Lander E, Golub T: Interpreting patterns of gene expression with self-organizing-maps: methods and application to hematopoietic differentiation. Proc Natl Acad Sci USA. 1999, 96: 2907-2912. 10.1073/pnas.96.6.2907. DOI: 10.1073/pnas.96.6.2907
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 2907-2912
-
-
Tamayo, P.1
Slonim, D.2
Mesirov, J.3
Zhu, Q.4
Kitareewan, S.5
Dmitrovsky, E.6
Lander, E.7
Golub, T.8
-
4
-
-
0032728081
-
Clustering gene expression patterns
-
PID: 10582567, COI: 1:CAS:528:DyaK1MXns1enur4%3D
-
Ben-Dor A, Shamir R, Yakhini Z: Clustering gene expression patterns. J Comput Biol. 1999, 6: 281-297. 10.1089/106652799318274. DOI: 10.1089/106652799318274
-
(1999)
J Comput Biol
, vol.6
, pp. 281-297
-
-
Ben-Dor, A.1
Shamir, R.2
Yakhini, Z.3
-
5
-
-
0035226961
-
Supervised harvesting of expression trees
-
research0003.1
-
Hastie T, Tibshirani R, Botstein D, Brown P: Supervised harvesting of expression trees. Genome Biol. 2001, 2: research0003.1-0003.12. 10.1186/gb-2001-2-1-research0003. DOI: 10.1186/gb-2001-2-1-research0003
-
(2001)
Genome Biol
, vol.2
-
-
Hastie, T.1
Tibshirani, R.2
Botstein, D.3
Brown, P.4
-
6
-
-
0036166439
-
Tumor classification by partial least squares using microarray gene expression data
-
PID: 11836210, COI: 1:CAS:528:DC%2BD38Xhs1eltbc%3D
-
Nguyen D, Rocke D: Tumor classification by partial least squares using microarray gene expression data. Bioinformatics. 2002, 18: 39-50. 10.1093/bioinformatics/18.1.39. DOI: 10.1093/bioinformatics/18.1.39
-
(2002)
Bioinformatics
, vol.18
, pp. 39-50
-
-
Nguyen, D.1
Rocke, D.2
-
7
-
-
11144325691
-
Partial least squares regression: a tutorial
-
COI: 1:CAS:528:DyaL28XmtVahs7c%3D
-
Geladi P, Kowalski B: Partial least squares regression: a tutorial. Analyt Chim Acta. 1986, 185: 1-17. 10.1016/0003-2670(86)80028-9. DOI: 10.1016/0003-2670(86)80028-9
-
(1986)
Analyt Chim Acta
, vol.185
, pp. 1-17
-
-
Geladi, P.1
Kowalski, B.2
-
8
-
-
0035222126
-
A nonparametric scoring algorithm for identifying informative genes from microarray data
-
Park P, Pagano M, Bonetti M: A nonparametric scoring algorithm for identifying informative genes from microarray data. Pac Symp Biocomput. 2001, 52-63.
-
(2001)
Pac Symp Biocomput
, pp. 52-63
-
-
Park, P.1
Pagano, M.2
Bonetti, M.3
-
9
-
-
0001884644
-
Individual comparisons by ranking methods
-
Wilcoxon F: Individual comparisons by ranking methods. Biometrics. 1945, 1: 80-83. DOI: 10.2307/3001968
-
(1945)
Biometrics
, vol.1
, pp. 80-83
-
-
Wilcoxon, F.1
-
10
-
-
0034568109
-
Gene shaving as a method of identifying distinct sets of genes with similar expression patterns
-
research0003.1
-
Hastie T, Tibshirani R, Eisen M, Alizadeh A, Levy R, Staudt L, Botstein D, Brown P: Gene shaving as a method of identifying distinct sets of genes with similar expression patterns. Genome Biol. 2000, 1: research0003.1-0003.21. 10.1186/gb-2000-1-2-research0003. DOI: 10.1186/gb-2000-1-2-research0003
-
(2000)
Genome Biol
, vol.1
-
-
Hastie, T.1
Tibshirani, R.2
Eisen, M.3
Alizadeh, A.4
Levy, R.5
Staudt, L.6
Botstein, D.7
Brown, P.8
-
12
-
-
0032355984
-
Classification by pairwise coupling
-
Hastie T, Tibshirani R: Classification by pairwise coupling. Annls Statistics. 1998, 26: 451-471. 10.1214/aos/1028144844. DOI: 10.1214/aos/1028144844
-
(1998)
Annls Statistics
, vol.26
, pp. 451-471
-
-
Hastie, T.1
Tibshirani, R.2
-
13
-
-
24044435942
-
Reducing multiclass to binary: a unifying approach for margin classifiers
-
Allwein E, Schapire R, Singer Y: Reducing multiclass to binary: a unifying approach for margin classifiers. J Machine Learn Res. 2000, 1: 113-141. 10.1162/15324430152733133.
-
(2000)
J Machine Learn Res
, vol.1
, pp. 113-141
-
-
Allwein, E.1
Schapire, R.2
Singer, Y.3
-
14
-
-
0033569406
-
Molecular classification of cancer: class discovery and class prediction by gene expression monitoring
-
PID: 10521349, COI: 1:CAS:528:DyaK1MXmvVOhu7g%3D
-
Golub T, Slonim D, Tamayo P, Huard C, Gassenbeek M, Coller H, Loh M, Downing J, Caliguri M, Bloomfield C, Lander E: Molecular classification of cancer: class discovery and class prediction by gene expression monitoring. Science. 1999, 286: 531-538. 10.1126/science.286.5439.531. DOI: 10.1126/science.286.5439.531
-
(1999)
Science
, vol.286
, pp. 531-538
-
-
Golub, T.1
Slonim, D.2
Tamayo, P.3
Huard, C.4
Gassenbeek, M.5
Coller, H.6
Loh, M.7
Downing, J.8
Caliguri, M.9
Bloomfield, C.10
Lander, E.11
-
15
-
-
85182693654
-
-
Whitehead Institute Center for Genomic Research: cancer genomics. [http://www-genome.wi.mit.edu/cancer]
-
-
-
-
16
-
-
0036489046
-
Comparison of discrimination methods for the classification of tumors using gene expression data
-
COI: 1:CAS:528:DC%2BD28Xht1SqtL7I
-
Dudoit S, Fridlyand J, Speed T: Comparison of discrimination methods for the classification of tumors using gene expression data. J Am Stat Assoc. 2002, 97: 77-87. 10.1198/016214502753479248. DOI: 10.1198/016214502753479248
-
(2002)
J Am Stat Assoc
, vol.97
, pp. 77-87
-
-
Dudoit, S.1
Fridlyand, J.2
Speed, T.3
-
17
-
-
0035949684
-
Predicting the clinical status of human breast cancer by using gene expression profiles
-
PID: 11562467, COI: 1:CAS:528:DC%2BD3MXnt1yqu7w%3D
-
West M, Blanchette C, Dressman H, Huang E, Ishida S, Spang R, Zuzan H, Olson J, Marks J, Nevins J: Predicting the clinical status of human breast cancer by using gene expression profiles. Proc Natl Acad Sci USA. 2001, 98: 11462-11467. 10.1073/pnas.201162998. DOI: 10.1073/pnas.201162998
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 11462-11467
-
-
West, M.1
Blanchette, C.2
Dressman, H.3
Huang, E.4
Ishida, S.5
Spang, R.6
Zuzan, H.7
Olson, J.8
Marks, J.9
Nevins, J.10
-
19
-
-
0033536012
-
Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays
-
PID: 10359783, COI: 1:CAS:528:DyaK1MXks1WksL4%3D
-
Alon U, Barkai N, Notterdam D, Gish K, Ybarra S, Mack D, Levine A: Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays. Proc Natl Acad Sci USA. 1999, 96: 6745-6750. 10.1073/pnas.96.12.6745. DOI: 10.1073/pnas.96.12.6745
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 6745-6750
-
-
Alon, U.1
Barkai, N.2
Notterdam, D.3
Gish, K.4
Ybarra, S.5
Mack, D.6
Levine, A.7
-
20
-
-
85182682260
-
-
Colorectal Cancer Microarray Research. [http://microarray.princeton.edu/oncology/]
-
-
-
-
21
-
-
19044391072
-
Gene expression correlates of clinical prostate cancer behavior
-
PID: 12086878, COI: 1:CAS:528:DC%2BD38XivVegsbc%3D
-
Singh D, Febbo P, Ross K, Jackson D, Manola J, Ladd C, Tamayo P, Renshaw A, D'Amico A, Richie J, et al: Gene expression correlates of clinical prostate cancer behavior. Cancer Cell. 2002, 1: 203-209. 10.1016/S1535-6108(02)00030-2. DOI: 10.1016/S1535-6108(02)00030-2
-
(2002)
Cancer Cell
, vol.1
, pp. 203-209
-
-
Singh, D.1
Febbo, P.2
Ross, K.3
Jackson, D.4
Manola, J.5
Ladd, C.6
Tamayo, P.7
Renshaw, A.8
D'Amico, A.9
Richie, J.10
-
22
-
-
0034954414
-
Classification and diagnostic prediction of cancer using gene expression profiling and artificial neural networks
-
Khan J, Wei J, Ringner M, Saal L, Ladanyi M, Westermann F, Berthold F, Schwab M, Antonescu C, Peterson C, Meltzer P: Classification and diagnostic prediction of cancer using gene expression profiling and artificial neural networks. Nat Med. 2001, 6: 673-679. 10.1038/89044. DOI: 10.1038/89044
-
(2001)
Nat Med
, vol.6
, pp. 673-679
-
-
Khan, J.1
Wei, J.2
Ringner, M.3
Saal, L.4
Ladanyi, M.5
Westermann, F.6
Berthold, F.7
Schwab, M.8
Antonescu, C.9
Peterson, C.10
Meltzer, P.11
-
23
-
-
85182719980
-
-
National Human Genome Research Institute: microarray project. [http://www.nhgri.nih.gov/DIR/Microarray/Supplement]
-
-
-
-
25
-
-
0034598746
-
Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling
-
PID: 10676951, COI: 1:CAS:528:DC%2BD3cXht1Shtrg%3D
-
Alizadeh A, Eisen M, Davis R, Ma C, Lossos I, Rosenwald A, Boldrick J, Sabet H, Tran T, Yu X, et al: Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling. Nature. 2000, 403: 503-511. 10.1038/35000501. DOI: 10.1038/35000501
-
(2000)
Nature
, vol.403
, pp. 503-511
-
-
Alizadeh, A.1
Eisen, M.2
Davis, R.3
Ma, C.4
Lossos, I.5
Rosenwald, A.6
Boldrick, J.7
Sabet, H.8
Tran, T.9
Yu, X.10
-
26
-
-
0037165140
-
Prediction of central nervous system embryonal tumor outcome based on gene expression
-
PID: 11807556, COI: 1:CAS:528:DC%2BD38XhtVCqtr0%3D
-
Pomeroy S, Tamayo P, Gaasenbeek M, Sturla L, Angelo M, McLaugh-lin M, Kim J, Goumnerova L, Black P, Lau C, et al: Prediction of central nervous system embryonal tumor outcome based on gene expression. Nature. 2002, 415: 436-442. 10.1038/415436a. DOI: 10.1038/415436a
-
(2002)
Nature
, vol.415
, pp. 436-442
-
-
Pomeroy, S.1
Tamayo, P.2
Gaasenbeek, M.3
Sturla, L.4
Angelo, M.5
McLaugh-lin, M.6
Kim, J.7
Goumnerova, L.8
Black, P.9
Lau, C.10
-
27
-
-
85182699945
-
-
Stanford NCI60 Cancer Microarray Project. [http://genome-www.stanford.edu/nci60/]
-
-
-
-
28
-
-
0034050902
-
Systematic variation in gene expression patterns in human cancer cell lines
-
Ross D, Scherf U, Eisen M, Perou C, Rees C, Spellman P, Iyer V, Jeffrey S, Van de Rijn M, Waltham M, et al: Systematic variation in gene expression patterns in human cancer cell lines. Nat Genet. 1999, 24: 227-235. DOI: 10.1038/73432
-
(1999)
Nat Genet
, vol.24
, pp. 227-235
-
-
Ross, D.1
Scherf, U.2
Eisen, M.3
Perou, C.4
Rees, C.5
Spellman, P.6
Iyer, V.7
Jeffrey, S.8
Van de Rijn, M.9
Waltham, M.10
-
29
-
-
0003909532
-
Discriminatory analysis - nonparametric discrimination: consistency properties
-
Agrawala A, (ed), IEEE Press, New York
-
Fix E, Hodges J: Discriminatory analysis - nonparametric discrimination: consistency properties. Report 1951, No. 4. US Air Force School of Aviation Medicine, Random Field, TX. In Machine Recognition of Patterns. Edited by: Agrawala A. 1977, New York: IEEE Press
-
(1977)
Report 1951, No. 4. US Air Force School of Aviation Medicine, Random Field, TX. In Machine Recognition of Patterns
-
-
Fix, E.1
Hodges, J.2
-
32
-
-
85182625384
-
-
10.1073/pnas.201162998
-
Data Collection for: West et al. (September 18, 2001) Proc Natl Acad Sci USA 10.1073/pnas.201162998. [http://www.pnas.org/cgi/content/full/201162998/DC1]
-
Data Collection For: West Et Al.
-
-
-
33
-
-
0033636139
-
Support vector machine classification and validation of cancer tissue samples using microarray expression data
-
PID: 11120680, COI: 1:CAS:528:DC%2BD3MXjvVWltA%3D%3D
-
Furey T, Cristianini N, Duffy N, Bednarski D, Schummer M, Haussler D: Support vector machine classification and validation of cancer tissue samples using microarray expression data. Bioinformatics. 2000, 16: 906-914. 10.1093/bioinformatics/16.10.906. DOI: 10.1093/bioinformatics/16.10.906
-
(2000)
Bioinformatics
, vol.16
, pp. 906-914
-
-
Furey, T.1
Cristianini, N.2
Duffy, N.3
Bednarski, D.4
Schummer, M.5
Haussler, D.6
-
34
-
-
0033692876
-
Tissue classification with gene expression profiles
-
PID: 11108479, COI: 1:CAS:528:DC%2BD3cXosVKjsb8%3D
-
Ben-Dor A, Bruhn L, Friedman N, Nachman I, Schummer M, Yakhini Z: Tissue classification with gene expression profiles. J Comput Biol. 2000, 7: 559-583. 10.1089/106652700750050943. DOI: 10.1089/106652700750050943
-
(2000)
J Comput Biol
, vol.7
, pp. 559-583
-
-
Ben-Dor, A.1
Bruhn, L.2
Friedman, N.3
Nachman, I.4
Schummer, M.5
Yakhini, Z.6
-
36
-
-
0032264630
-
The problem of regions
-
Efron B, Tibshirani R: The problem of regions. Annls Statistics. 1998, 26: 1687-1718. 10.1214/aos/1024691353. DOI: 10.1214/aos/1024691353
-
(1998)
Annls Statistics
, vol.26
, pp. 1687-1718
-
-
Efron, B.1
Tibshirani, R.2
-
37
-
-
0034164230
-
Additive logistic regression: a statistical view of boosting
-
Friedman J, Hastie T, Tibshirani R: Additive logistic regression: a statistical view of boosting. Annls Statistics. 2000, 28: 337-407. 10.1214/aos/1016218222. DOI: 10.1214/aos/1016218223
-
(2000)
Annls Statistics
, vol.28
, pp. 337-407
-
-
Friedman, J.1
Hastie, T.2
Tibshirani, R.3
|