메뉴 건너뛰기




Volumn 39, Issue 1, 2006, Pages 124-134

Generating single-copy nuclear gene data for a recent adaptive radiation

Author keywords

3 UTR; Aquilegia; Gene genealogy; Nuclear intron; Orthology

Indexed keywords

COMPLEMENTARY DNA;

EID: 33644994200     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2005.10.010     Document Type: Article
Times cited : (56)

References (53)
  • 1
    • 0242569265 scopus 로고    scopus 로고
    • Novel intron phylogeny supports plumage convergence in orioles (Icterus)
    • E. Allen, and K. Omland Novel intron phylogeny supports plumage convergence in orioles (Icterus) The Auk 120 2003 961 969
    • (2003) The Auk , vol.120 , pp. 961-969
    • Allen, E.1    Omland, K.2
  • 4
    • 33645002543 scopus 로고    scopus 로고
    • Plant phylogeography based on rDNA ITS sequence data: Two examples from the Asteraceae
    • F.T. Bakker L.W. Chatrou B. Gravendeel P.B. Pelser A.R.G. Gantner Verlag Ruggell
    • N. Barker, I. Senger, S. Howis, C. Zachariades, and B. Ripley Plant phylogeography based on rDNA ITS sequence data: two examples from the Asteraceae F.T. Bakker L.W. Chatrou B. Gravendeel P.B. Pelser Plant Species-Level Systematics: New Perspectives on Pattern and Process 2005 A.R.G. Gantner Verlag Ruggell 217 244
    • (2005) Plant Species-Level Systematics: New Perspectives on Pattern and Process , pp. 217-244
    • Barker, N.1    Senger, I.2    Howis, S.3    Zachariades, C.4    Ripley, B.5
  • 6
    • 0036218945 scopus 로고    scopus 로고
    • Rapid concerted evolution via gene conversion at the Drosophila hsp70 genes
    • B.R. Bettencourt, and M.E. Feder Rapid concerted evolution via gene conversion at the Drosophila hsp70 genes Journal of Molecular Evolution 54 2002 569 586
    • (2002) Journal of Molecular Evolution , vol.54 , pp. 569-586
    • Bettencourt, B.R.1    Feder, M.E.2
  • 7
    • 0029130801 scopus 로고
    • Genetic mapping of floral traits associated with reproductive isolation in monkeyflowers (Mimulus)
    • H.D. Bradshaw, S.M. Wilbert, K.G. Otto, and D.W. Schemske Genetic mapping of floral traits associated with reproductive isolation in monkeyflowers (Mimulus) Nature 376 1995 762 765
    • (1995) Nature , vol.376 , pp. 762-765
    • Bradshaw, H.D.1    Wilbert, S.M.2    Otto, K.G.3    Schemske, D.W.4
  • 8
    • 0036239573 scopus 로고    scopus 로고
    • Rapid diversification of the cotton genus (Gossypium: Malvaceae) revealed by analysis of sixteen nuclear and chloroplast genes
    • R.C. Cronn, R.L. Small, T. Haselkorn, and J.F. Wendel Rapid diversification of the cotton genus (Gossypium: Malvaceae) revealed by analysis of sixteen nuclear and chloroplast genes American Journal of Botany 89 2002 707 725
    • (2002) American Journal of Botany , vol.89 , pp. 707-725
    • Cronn, R.C.1    Small, R.L.2    Haselkorn, T.3    Wendel, J.F.4
  • 9
    • 0034991695 scopus 로고    scopus 로고
    • Nuclear intron sequences for phylogenetics of closely related mammals: An example using the phylogeny of Mus
    • R.W. DeBry, and S. Seshadri Nuclear intron sequences for phylogenetics of closely related mammals: An example using the phylogeny of Mus Journal of Mammalogy 82 2001 280 288
    • (2001) Journal of Mammalogy , vol.82 , pp. 280-288
    • Debry, R.W.1    Seshadri, S.2
  • 10
    • 0041508533 scopus 로고    scopus 로고
    • Chloroplast-expressed glutamine synthetase in Glycine and related Leguminosae: Phylogeny, gene duplication, and ancient polyploidy
    • J.J. Doyle, J.L. Doyle, and C. Harbison Chloroplast-expressed glutamine synthetase in Glycine and related Leguminosae: Phylogeny, gene duplication, and ancient polyploidy Systematic Botany 28 2003 567 577
    • (2003) Systematic Botany , vol.28 , pp. 567-577
    • Doyle, J.J.1    Doyle, J.L.2    Harbison, C.3
  • 11
    • 2442460043 scopus 로고    scopus 로고
    • Phylogeny and evolution of the Australo-Papuan honeyeaters (Passeriformes, Meliphagidae)
    • A. Driskell, and L. Christidis Phylogeny and evolution of the Australo-Papuan honeyeaters (Passeriformes, Meliphagidae) Molecular Phylogenetics and Evolution 31 2004 943 960
    • (2004) Molecular Phylogenetics and Evolution , vol.31 , pp. 943-960
    • Driskell, A.1    Christidis, L.2
  • 15
    • 14144255694 scopus 로고    scopus 로고
    • A multi-gene phylogeny of aquiline eagles (Aves: Accipitriformes) reveals extensive paraphyly at the genus level
    • A. Helbig, A. Kocum, I. Seibold, and M. Braun A multi-gene phylogeny of aquiline eagles (Aves: Accipitriformes) reveals extensive paraphyly at the genus level Molecular Phylogenetics and Evolution 35 2005 147 164
    • (2005) Molecular Phylogenetics and Evolution , vol.35 , pp. 147-164
    • Helbig, A.1    Kocum, A.2    Seibold, I.3    Braun, M.4
  • 17
    • 0029531224 scopus 로고
    • Spurring plant diversification: Are floral nectar spurs a key innovation?
    • S.A. Hodges, and M.L. Arnold Spurring plant diversification: are floral nectar spurs a key innovation? Proceedings of the Royal Society of London B 262 1995 343 348
    • (1995) Proceedings of the Royal Society of London B , vol.262 , pp. 343-348
    • Hodges, S.A.1    Arnold, M.L.2
  • 18
    • 0036176589 scopus 로고    scopus 로고
    • Genetics of floral traits influencing reproductive isolation between Aquilegia formosa and Aquilegia pubescens
    • S.A. Hodges, J.B. Whittall, M. Fulton, and J.Y. Yang Genetics of floral traits influencing reproductive isolation between Aquilegia formosa and Aquilegia pubescens American Naturalist 159 2002 S51 S60
    • (2002) American Naturalist , vol.159
    • Hodges, S.A.1    Whittall, J.B.2    Fulton, M.3    Yang, J.Y.4
  • 19
    • 19544388367 scopus 로고    scopus 로고
    • Genealogical evidence of homoploid hybrid speciation in an adaptive radiation of Scaevola (Goodeniaceae)
    • D.G. Howarth, and D.A. Baum Genealogical evidence of homoploid hybrid speciation in an adaptive radiation of Scaevola (Goodeniaceae) Evolution 59 2005 948 961
    • (2005) Evolution , vol.59 , pp. 948-961
    • Howarth, D.G.1    Baum, D.A.2
  • 20
    • 0033936592 scopus 로고    scopus 로고
    • Nuclear and mitochondrial genes contain similar phylogenetic signal for pigeons and doves (Aves: Columbiformes)
    • K. Johnson, and D. Clayton Nuclear and mitochondrial genes contain similar phylogenetic signal for pigeons and doves (Aves: Columbiformes) Molecular Phylogenetics and Evolution 14 2000 141 151
    • (2000) Molecular Phylogenetics and Evolution , vol.14 , pp. 141-151
    • Johnson, K.1    Clayton, D.2
  • 22
    • 0037270295 scopus 로고    scopus 로고
    • Complex patterns of gene duplication in the apetala3 and pistillata lineages of the Ranunculaceae
    • E.M. Kramer, V.S.D. Stilio, and P.M. Schluter Complex patterns of gene duplication in the apetala3 and pistillata lineages of the Ranunculaceae International Journal of Plant Sciences 164 2003 1 11
    • (2003) International Journal of Plant Sciences , vol.164 , pp. 1-11
    • Kramer, E.M.1    Stilio, V.S.D.2    Schluter, P.M.3
  • 24
    • 0037316641 scopus 로고    scopus 로고
    • Phylogenetic utility of the first two introns of the S7 ribosomal protein gene in African electric fishes (Mormyroidea: Teleostei) and congruence with other molecular markers
    • S. Lavoue, J.P. Sullivan, and C.D. Hopkins Phylogenetic utility of the first two introns of the S7 ribosomal protein gene in African electric fishes (Mormyroidea: Teleostei) and congruence with other molecular markers Biological Journal of the Linnean Society 78 2003 273 292
    • (2003) Biological Journal of the Linnean Society , vol.78 , pp. 273-292
    • Lavoue, S.1    Sullivan, J.P.2    Hopkins, C.D.3
  • 27
    • 0037308625 scopus 로고    scopus 로고
    • Translational control by the 3′-UTR: The ends specify the means
    • B. Mazumder, V. Seshadri, and P.L. Fox Translational control by the 3′-UTR: The ends specify the means Trends in Biochemical Sciences 28 2003 91 98
    • (2003) Trends in Biochemical Sciences , vol.28 , pp. 91-98
    • Mazumder, B.1    Seshadri, V.2    Fox, P.L.3
  • 28
    • 0002036068 scopus 로고
    • Aquilegia: The cultivated and wild columbines
    • P.A. Munz Aquilegia: The cultivated and wild columbines Gentes Herbarium 7 1946 1 150
    • (1946) Gentes Herbarium , vol.7 , pp. 1-150
    • Munz, P.A.1
  • 31
    • 0028354921 scopus 로고
    • Contrasting population structure from nuclear intron sequences and mtDNA of humpback whales
    • S.R. Palumbi, and C.S. Baker Contrasting population structure from nuclear intron sequences and mtDNA of humpback whales Molecular Biology and Evolution 11 1994 426 435
    • (1994) Molecular Biology and Evolution , vol.11 , pp. 426-435
    • Palumbi, S.R.1    Baker, C.S.2
  • 32
    • 0034978958 scopus 로고    scopus 로고
    • Predicting nuclear gene coalescence from mitochondrial data: The three-times rule
    • S.R. Palumbi, F. Cipriano, and M.P. Hare Predicting nuclear gene coalescence from mitochondrial data: The three-times rule Evolution 55 2001 859 868
    • (2001) Evolution , vol.55 , pp. 859-868
    • Palumbi, S.R.1    Cipriano, F.2    Hare, M.P.3
  • 34
    • 0031253699 scopus 로고    scopus 로고
    • Molecular phylogenetic study of the Ranunculaceae: Utility of the nuclear 26S ribosomal DNA in inferring intrafamilial relationships
    • K.E. Ro, C.S. Keener, and B.A. McPheron Molecular phylogenetic study of the Ranunculaceae: Utility of the nuclear 26S ribosomal DNA in inferring intrafamilial relationships Molecular Phylogenetics and Evolution 8 1997 117 127
    • (1997) Molecular Phylogenetics and Evolution , vol.8 , pp. 117-127
    • Ro, K.E.1    Keener, C.S.2    McPheron, B.A.3
  • 36
    • 0025998781 scopus 로고
    • The maize cytosolic glyceraldehyde-3-phosphate dehydrogenase gene family organ-specific expression and genetic analysis
    • D.A. Russell, and M.M. Sachs The maize cytosolic glyceraldehyde-3- phosphate dehydrogenase gene family organ-specific expression and genetic analysis Molecular and General Genetics 229 1991 219 228
    • (1991) Molecular and General Genetics , vol.229 , pp. 219-228
    • Russell, D.A.1    Sachs, M.M.2
  • 37
  • 38
    • 3242763941 scopus 로고    scopus 로고
    • Untangling multi-gene families in plants by integrating proteomics into functional genomics
    • P. Sappl, J. Heazlewood, and A. Millar Untangling multi-gene families in plants by integrating proteomics into functional genomics Phytochemistry 65 2004 1517 1530
    • (2004) Phytochemistry , vol.65 , pp. 1517-1530
    • Sappl, P.1    Heazlewood, J.2    Millar, A.3
  • 43
    • 0033870718 scopus 로고    scopus 로고
    • Phylogeny, duplication, and intraspecific variation of Adh gene family in diploid and tetraploid cotton (Gossypium)
    • R.L. Small, and J.F. Wendel Phylogeny, duplication, and intraspecific variation of Adh gene family in diploid and tetraploid cotton (Gossypium) Genetics 155 2000 1913 1926
    • (2000) Genetics , vol.155 , pp. 1913-1926
    • Small, R.L.1    Wendel, J.F.2
  • 44
    • 15744380228 scopus 로고    scopus 로고
    • New DNA data from a transthyretin nuclear intron suggest an Oligocene to Miocene diversification of living South American opossums (Marsupialia: Didelphidae)
    • C. Steiner, M. Tilak, E. Douzery, and F. Catzeflis New DNA data from a transthyretin nuclear intron suggest an Oligocene to Miocene diversification of living South American opossums (Marsupialia: Didelphidae) Molecular Phylogenetics and Evolution 35 2005 363 379
    • (2005) Molecular Phylogenetics and Evolution , vol.35 , pp. 363-379
    • Steiner, C.1    Tilak, M.2    Douzery, E.3    Catzeflis, F.4
  • 45
  • 48
    • 0036368055 scopus 로고    scopus 로고
    • A test of a mitochondrial gene-based phylogeny of woodpeckers (Genus Picoides) using an independent nuclear gene, B-Fibrinogen intron 7
    • A.C. Weibel, and W.S. Moore A test of a mitochondrial gene-based phylogeny of woodpeckers (Genus Picoides) using an independent nuclear gene, B-Fibrinogen intron 7 Molecular Phylogenetics and Evolution 22 2002 247 257
    • (2002) Molecular Phylogenetics and Evolution , vol.22 , pp. 247-257
    • Weibel, A.C.1    Moore, W.S.2
  • 49
    • 0034127972 scopus 로고    scopus 로고
    • Detecting nucleotide additivity from direct sequences is a SNAP: An example from Sidalcea (Malvaceae)
    • J.B. Whittall, A. Liston, S. Gisler, and R.J. Meinke Detecting nucleotide additivity from direct sequences is a SNAP: An example from Sidalcea (Malvaceae) Plant Biology 2 2000 211 217
    • (2000) Plant Biology , vol.2 , pp. 211-217
    • Whittall, J.B.1    Liston, A.2    Gisler, S.3    Meinke, R.J.4
  • 50
    • 4444339427 scopus 로고    scopus 로고
    • Aquilegia
    • A.T. Whittemore Oxford University Press New York
    • A.T. Whittemore Aquilegia A.T. Whittemore Flora of North America 1997 Oxford University Press New York 249 258
    • (1997) Flora of North America , pp. 249-258
    • Whittemore, A.T.1
  • 51
    • 0032827591 scopus 로고    scopus 로고
    • A phylogenetically conserved hairpin-type 3′ untranslated region pseudoknot functions in coronavirus RNA replication
    • G.D. Williams, R.Y. Chang, and D.A. Brian A phylogenetically conserved hairpin-type 3′ untranslated region pseudoknot functions in coronavirus RNA replication Journal of Virology 73 1999 8349 8355
    • (1999) Journal of Virology , vol.73 , pp. 8349-8355
    • Williams, G.D.1    Chang, R.Y.2    Brian, D.A.3
  • 52
    • 0031127853 scopus 로고    scopus 로고
    • Alternate paths of evolution for the photosynthetic gene rbcL in four nonphotosynthetic species of Orobanche
    • A.D. Wolfe, and C.W. dePamphilis Alternate paths of evolution for the photosynthetic gene rbcL in four nonphotosynthetic species of Orobanche Plant Molecular Biology 33 1997 965 977
    • (1997) Plant Molecular Biology , vol.33 , pp. 965-977
    • Wolfe, A.D.1    Depamphilis, C.W.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.