Nuclear intron sequences for phylogenetics of closely related mammals: An example using the phylogeny of Mus

Journal of Mammalogy

Volumn 82, Issue 2, 2001, Pages 280-288

  DeBry, R W ^a   Seshadri, S ^a  

^a UNIVERSITY OF CINCINNATI   (United States)

Author keywords

Intron; Mus; Nuclear sequences; Phylogenetics; Rattus

Indexed keywords

CELL NUCLEUS DNA; DNA SEQUENCE; GENETIC DIVERGENCE; INTRON; LIFE HISTORY TRAIT; MALATE DEHYDROGENASE; MITOCHONDRION; PARAPHYLY; PHYLOGENY;

MAMMALIA; MUS; MUS MUSCULUS; MUSCULUS; RATTUS; RODENTIA;

EID: 0034991695     PISSN: 00222372     EISSN: None     Source Type: Journal    
DOI: 10.1644/1545-1542(2001)082<0280:NISFPO>2.0.CO;2     Document Type: Article

References (41)

1. Biochemical diversity and evolution in the genus Mus
2. The evolution of house mice
3. Origin and radiation of the house mouse: Mitochondrial DNA phylogeny
4. Origin and radiation of the house mouse: Clues from nuclear genes
5. Evolutionary trees from DNA sequences: A maximum likelihood approach
6. Confidence limits on phylogenies: An approach using the bootstrap
7. Confidence limits on phylogenies with a molecular clock
8. Mitochondrial DNA evolution in mice
9. Substitution rate variation in closely related rodent species
10. Phylogeny of the Carnivora (Mammalia): Congruence vs incompatibility among multiple data sets
11. Phylogenetic analysis of the alpha-globin pseudogene-4 (Hba-ps4) locus in the house mouse species complex reveals a stepwise evolution of t haplotypes
12. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
13. Branch and bound algorithms to determine minimal evolutionary trees
14. The marsupial mitochondrial genome and the evolution of placental mammals
15. The complete mitochondrial genome of the wallaroo (Macropus robustus) and the phylogenetic relationship among Monotremata, Marsupialia, and Eutheria
16. Evolution of protein molecules
17. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
18. Striking sequence similarity over almost 100 kilobases of human and mouse T-cell receptor DNA
19. Evolution of Mhc-DRB introns: Implications for the origin of primates
20. Tracing paternal ancestry in mice, using the Y-linked, sex-determining locus, Sry
21. Taxonomy
22. A congruence test of reliability using linked mitochondrial DNA sequences
23. Inferring phylogenies from mtDNA variation: Mitochondrial-gene trees versus nuclear-gene trees
24. Implications of the genetic divergence between European wild mice with Robertsonian translocations from the viewpoint of mitochondrial DNA
25. Family Muridae
26. Evidence on mammalian phylogeny from sequences of exon 28 of the von Willebrand factor gene
27. Mitochondrial DNA sequence diversity and the colonization of Scandinavia by house mice from East Holstein
28. Mitochondrial DNA sequence variation in the eastern house mouse, Mus musculus: Comparison with other house mice and report of a 75-bp tandem repeat
29. Wild mice
30. House mice as models in systematic biology
31. Molecular phylogenies in the genus Mus: Comparative analysis of electrophoretic, scnDNA hybridization, and mtDNA RFLP data
32. Endemic African mammals shake the phylogenetic tree
33. Highly congruent molecular support for a diverse superordinal clade of endemic African mammals
34. Mammalian evolution and the interphotoreceptor retinoid binding protein (IRBP) gene: Convincing evidence for several superordinal clades
35. Phylogenetic inference
36. Y chromosome evolution in the subgenus Mus (genus Mus)
37. Fitting discrete probability distributions to evolutionary events
38. Nuclear and mitochondrial DNA comparisons reveal extreme rate variation in the molecular clock
39. Substitution rate variation among sites in hyper variable region I of human mitochondrial DNA
40. Genetic diversity and geographic distribution of Mus musculus subspecies based on polymorphism of mitochondrial DNA