Identification of mouse genes with highly specific expression patterns in differentiated intestinal epithelium

Gastroenterology

Volumn 130, Issue 3, 2006, Pages 902-907

  Schröder, Natalia ^a   Sekhar, Aravind ^a   Geffers, Insa ^a   Müller, Julia ^a   Dittrich Breiholz, Oliver ^a   Kracht, Michael ^a   Wedemeyer, Jochen ^a   Gossler, Achim ^a  

^a HANNOVER MEDICAL SCHOOL   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL CELL; ANIMAL TISSUE; ARTICLE; CELL DIFFERENTIATION; CELL INTERACTION; DOWN REGULATION; GENE EXPRESSION; GENE IDENTIFICATION; IN SITU HYBRIDIZATION; INTESTINE EPITHELIUM CELL; MATURATION; MICROARRAY ANALYSIS; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; ORGANOGENESIS; PRIORITY JOURNAL;

EID: 33644857438     PISSN: 00165085     EISSN: None     Source Type: Journal    
DOI: 10.1053/j.gastro.2005.12.025     Document Type: Article

References (45)

1. T.S. Stappenbeck, M.H. Wong, J.R. Saam, I.U. Mysorekar, J.I. Gordon Notes from some crypt watchers regulation of renewal in the mouse intestinal epithelium Curr Opin Cell Biol 10 1998 702 709
2. H. Cheng Origin, differentiation and renewal of the four main epithelial cell types in the mouse small intestine. II. Mucous cells Am J Anat 141 1974 481 501
3. H. Cheng, C.P. Leblond Origin, differentiation and renewal of the four main epithelial cell types in the mouse small intestine. I. Columnar cell Am J Anat 141 1974 461 479
4. H. Cheng, C.P. Leblond Origin, differentiation and renewal of the four main epithelial cell types in the mouse small intestine. V. Unitarian theory of the origin of the four epithelial cell types Am J Anat 141 1974 537 561
5. H. Cheng, C.P. Leblond Origin, differentiation and renewal of the four main epithelial cell types in the mouse small intestine. III. Entero-endocrine cells Am J Anat 141 1974 503 519
6. H. Cheng Origin, differentiation and renewal of the four main epithelial cell types in the mouse small intestine. IV. Paneth cells Am J Anat 141 1974 521 535
7. K.H. Kaestner, D.G. Silberg, P.G. Traber, G. Schutz The mesenchymal winged helix transcription factor Fkh6 is required for the control of gastrointestinal proliferation and differentiation Genes Dev 11 1997 1583 1595
8. O. Pabst, R. Zweigerdt, H.H. Arnold Targeted disruption of the homeobox transcription factor Nkx2-3 in mice results in postnatal lethality and abnormal development of small intestine and spleen Development 126 1999 2215 2225
9. M.H. Wong, B. Rubinfeld, J.I. Gordon Effects of forced expression of an NH2-terminal truncated beta-catenin on mouse intestinal epithelial homeostasis J Cell Biol 141 1998 765 777
10. V. Korinek, N. Barker, P. Moerer, E. van Donselaar, G. Huls, P.J. Peters, H. Clevers Depletion of epithelial stem-cell compartments in the small intestine of mice lacking Tcf-4 Nat Genet 19 1998 379 383
11. M. Bienz, H. Clevers Linking colorectal cancer to Wnt signaling Cell 103 2000 311 320
12. M. van de Wetering, E. Sancho, C. Verweij, W. de Lau, I. Oving, A. Hurlstone, K. van der Horn, E. Batlle, D. Coudreuse, A.P. Haramis, M. Tjon-Pon-Fong, P. Moerer, M. van den Born, G. Soete, S. Pals, M. Eilers, R. Medema, H. Clevers The beta-catenin/TCF-4 complex imposes a crypt progenitor phenotype on colorectal cancer cells Cell 111 2002 241 250
13. V. Korinek, N. Barker, P.J. Morin, D. van Wichen, R. de Weger, K.W. Kinzler, B. Vogelstein, H. Clevers Constitutive transcriptional activation by a beta-catenin-Tcf complex in APC-/- colon carcinoma Science 275 1997 1784 1787
14. J. Jensen, E.E. Pedersen, P. Galante, J. Hald, R.S. Heller, M. Ishibashi, R. Kageyama, F. Guillemot, P. Serup, O.D. Madsen Control of endodermal endocrine development by Hes-1 Nat Genet 24 2000 36 44
15. H. Mutoh, B.P. Fung, F.J. Naya, M.J. Tsai, J. Nishitani, A.B. Leiter The basic helix-loop-helix transcription factor BETA2/NeuroD is expressed in mammalian enteroendocrine cells and activates secretin gene expression Proc Natl Acad Sci U S A 94 1997 3560 3564
16. Q. Yang, N.A. Bermingham, M.J. Finegold, H.Y. Zoghbi Requirement of math1 for secretory cell lineage commitment in the mouse intestine Science 294 2001 2155 2158
17. P. Chomczynski, N. Sacchi Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction Anal Biochem 162 1987 156 159
18. M.H. Linskens, J. Feng, W.H. Andrews, B.E. Enlow, S.M. Saati, L.A. Tonkin, W.D. Funk, B. Villeponteau Cataloging altered gene expression in young and senescent cells using enhanced differential display Nucleic Acids Res 23 1995 3244 3251
19. B. Lescher, B. Haenig, A. Kispert sFRP-2 is a target of the Wnt-4 signaling pathway in the developing metanephric kidney Dev Dyn 213 1998 440 451
20. D.G. Wilkinson Whole mount in situ hybridization of vertebrate embryos D.G. Wilkinson In situ hybridization A practical approach 1992 Oxford University Press Oxford 75 84
21. A.R. Moser, H.C. Pitot, W.F. Dove A dominant mutation that predisposes to multiple intestinal neoplasia in the mouse Science 247 1990 322 324
22. M.D. Bates, C.R. Erwin, L.P. Sanford, D. Wiginton, J.A. Bezerra, L.C. Schatzman, A.G. Jegga, C. Ley-Ebert, S.S. Williams, K.A. Steinbrecher, B.W. Warner, M.B. Cohen, B.J. Aronow Novel genes and functional relationships in the adult mouse gastrointestinal tract identified by microarray analysis Gastroenterology 122 2002 1467 1482
23. T.S. Stappenbeck, J.C. Mills, J.I. Gordon Molecular features of adult mouse small intestinal epithelial progenitors Proc Natl Acad Sci U S A 100 2003 1004 1009
24. M. Lepourcelet, L. Tou, L. Cai, J. Sawada, A.J. Lazar, J.N. Glickman, J.A. Williamson, A.D. Everett, M. Redston, E.A. Fox, Y. Nakatani, R.A. Shivdasani Insights into developmental mechanisms and cancers in the mammalian intestine derived from serial analysis of gene expression and study of the hepatoma-derived growth factor (HDGF) Development 132 2005 415 427
25. P. Andreu, S. Colnot, C. Godard, S. Gad, P. Chafey, M. Niwa-Kawakita, P. Laurent-Puig, A. Kahn, S. Robine, C. Perret, B. Romagnolo Crypt-restricted proliferation and commitment to the Paneth cell lineage following Apc loss in the mouse intestine Development 132 2005 1443 1451
26. S. Violette, E. Festor, I. Pandrea-Vasile, V. Mitchell, C. Adida, E. Dussaulx, J.M. Lacorte, J. Chambaz, M. Lacasa, T. Lesuffleur Reg IV, a new member of the regenerating gene family, is overexpressed in colorectal carcinomas Int J Cancer 103 2003 185 193
27. M. Kamarainen, K. Heiskala, S. Knuutila, M. Heiskala, O. Winqvist, L.C. Andersson RELP, a novel human REG-like protein with up-regulated expression in inflammatory and metaplastic gastrointestinal mucosa Am J Pathol 163 2003 11 20
28. N. Oue, Y. Hamai, Y. Mitani, S. Matsumura, Y. Oshimo, P.P. Aung, K. Kuraoka, H. Nakayama, W. Yasui Gene expression profile of gastric carcinoma identification of genes and tags potentially involved in invasion, metastasis, and carcinogenesis by serial analysis of gene expression Cancer Res 64 2004 2397 2405
29. J.C. Hartupee, H. Zhang, M.F. Bonaldo, M.B. Soares, B.K. Dieckgraefe Isolation and characterization of a cDNA encoding a novel member of the human regenerating protein family Reg IV Biochim Biophys Acta 1518 2001 287 293
30. N. Behrendt, M. Ploug, L. Patthy, G. Houen, F. Blasi, K. Dano The ligand-binding domain of the cell surface receptor for urokinase-type plasminogen activator J Biol Chem 266 1991 7842 7847
31. J.W. Hammelburger, R.G. Palfree, S. Sirlin, U. Hammerling Demonstration of phosphatidylinositol anchors on Ly-6 molecules by specific phospholipase C digestion and gel electrophoresis in octylglucoside Biochem Biophys Res Commun 148 1987 1304 1311
32. A. English, R. Kosoy, R. Pawlinski, A. Bamezai A monoclonal antibody against the 66-kDa protein expressed in mouse spleen and thymus inhibits Ly-6A.2-dependent cell-cell adhesion J Immunol 165 2000 3763 3771
33. A. Hanninen, I. Jaakkola, M. Salmi, O. Simell, S. Jalkanen Ly-6C regulates endothelial adhesion and homing of CD8(+) T cells by activating integrin-dependent adhesion pathways Proc Natl Acad Sci U S A 94 1997 6898 6903
34. D.K. Smith, H. Xue Sequence profiles of immunoglobulin and immunoglobulin-like domains J Mol Biol 274 1997 530 545
35. H. Okamoto The Reg gene family and Reg proteins with special attention to the regeneration of pancreatic beta-cells J Hepatobiliary Pancreat Surg 6 1999 254 262
36. M. Unno, K. Nata, N. Noguchi, Y. Narushima, T. Akiyama, T. Ikeda, K. Nakagawa, S. Takasawa, H. Okamoto Production and characterization of Reg knockout mice reduced proliferation of pancreatic beta-cells in Reg knockout mice Diabetes 51 Suppl 3 2002 S478 S483
37. T. Watanabe, Y. Yonemura, H. Yonekura, Y. Suzuki, H. Miyashita, K. Sugiyama, S. Moriizumi, M. Unno, O. Tanaka, H. Kondo Pancreatic beta-cell replication and amelioration of surgical diabetes by Reg protein Proc Natl Acad Sci U S A 91 1994 3589 3592
38. H. Nishimune, S. Vasseur, S. Wiese, M.C. Birling, B. Holtmann, M. Sendtner, J.L. Iovanna, C.E. Henderson Reg-2 is a motoneuron neurotrophic factor and a signalling intermediate in the CNTF survival pathway Nat Cell Biol 2 2000 906 914
39. C. Garlanda, B. Bottazzi, A. Bastone, A. Mantovani Pentraxins at the crossroads between innate immunity, inflammation, matrix deposition and female fertility Annu Rev Immunol 23 2004 337 366
40. H. Gewurz, X.H. Zhang, T.F. Lint Structure and function of the pentraxins Curr Opin Immunol 7 1995 54 64
41. D. Tisi, J.F. Talts, R. Timpl, E. Hohenester Structure of the C-terminal laminin G-like domain pair of the laminin alpha2 chain harbouring binding sites for alpha-dystroglycan and heparin EMBO J 19 2000 1432 1440
42. G. Rudenko, T. Nguyen, Y. Chelliah, T.C. Sudhof, J. Deisenhofer The structure of the ligand-binding domain of neurexin Ibeta regulation of LNS domain function by alternative splicing Cell 99 1999 93 101
43. J.P. Drenth, R. te Morsche, J.B. Jansen Mutations in serine protease inhibitor Kazal type 1 are strongly associated with chronic pancreatitis Gut 50 2002 687 692
44. H. Witt The SPINK in chronic pancreatitis similar finds, different minds Gut 50 2002 590 591
45. S. Chavanas, C. Bodemer, A. Rochat, D. Hamel-Teillac, M. Ali, A.D. Irvine, J.L. Bonafe, J. Wilkinson, A. Taieb, Y. Barrandon, J.I. Harper, Y. de Prost, A. Hovnanian Mutations in SPINK5, encoding a serine protease inhibitor, cause Netherton syndrome Nat Genet 25 2000 141 142