The structure at 1.6 Å resolution of the protein product of the At4g34215 gene from Arabidopsis thaliana

Acta Crystallographica Section D: Biological Crystallography

Volumn 61, Issue 12, 2005, Pages 1655-1661

  Bitto, Eduard ^a   Bingman, Craig A ^a   McCoy, Jason G ^a   Allard, Simon T M ^a   Wesenberg, Gary E ^a   Phillips Jr , George N ^a  

^a UNIVERSITY OF WISCONSIN MADISON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA;

ARABIDOPSIS PROTEIN; AT4G34215 PROTEIN, ARABIDOPSIS; ESTERASE;

AMINO ACID SEQUENCE; ARTICLE; BINDING SITE; CHEMISTRY; CRYSTALLIZATION; MOLECULAR GENETICS; PROTEIN FOLDING; SEQUENCE ALIGNMENT; X RAY CRYSTALLOGRAPHY;

AMINO ACID SEQUENCE; ARABIDOPSIS PROTEINS; BINDING SITES; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; ESTERASES; MOLECULAR SEQUENCE DATA; PROTEIN FOLDING; SEQUENCE ALIGNMENT;

EID: 33644837595     PISSN: 09074449     EISSN: 13990047     Source Type: Journal    
DOI: 10.1107/S0907444905034074     Document Type: Article

References (30)

1. Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Nucleic Acids Res. 25, 3389-3402.
2. Bairoch, A., Apweiler, R., Wu, C. H., Barker, W. C., Boeckmann, B., Ferro, S., Gasteiger, E., Huang, H., Lopez, R., Magrane, M., Martin, M. J., Natale, D. A., O'Donovan, C., Redaschi, N. & Yeh, L. S. (2005). Nucleic Acids Res. 33, D154-D159.
3. Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weissig, H., Shindyalov, I. N. & Bourne, P. E. (2000). Nucleic Acids Res. 28, 235-242.
4. Bond, C. S. (2003). Bioinformatics, 19, 311-312.
5. Collaborative Computational Project, Number 4 (1994). Acta Cryst. D50, 760-763.
6. Coutinho, P. & Henrissat, B. (1999a). Recent Advances in Carbohydrate Bioengineering, edited by H. Gilbert, G. Davies, B. Henrissat & B. Svensson, pp. 3-12. Cambridge: Royal Society of Chemistry.
7. Coutinho, P. & Henrissat, B. (1999b). Carbohydrate-Active Enzymes Server. http://afmb.cnrs-mrs.fr/CAZY/.
8. DeLano, W. L. (2002). The PyMOL Molecular Graphics System, DeLano Scientific, San Carlos, CA, USA. http://www.pymol.org.
9. Gough, J., Karplus, K., Hughey, R. & Chothia, C. (2001). J. Mol. Biol. 313, 903-919.
10. Ho, Y. S., Swenson, L., Derewenda, U., Serre, L., Wei, Y., Dauter, Z., Hattori, M., Adachi, T., Aoki, J., Arai, H., Inoue, K. & Derewenda, Z. S. (1997). Nature (London), 385, 89-93.
11. Holm, L. & Sander, C. (1993). J. Mol. Biol. 233, 123-138.
12. Jeon, W., Aceti, D. J., Bingman, C., Vojtik, F., Olson, A., Ellefson, J., McCombs, J., Sreenath, H., Blommel, P., Seder, K., Buchan, B., Burns, B., Geetha, H., Harms, A., Sabat, G., Sussman, M., Fox, B. & Phillips, G. (2005). J. Struct. Funct. Genomics, 6, 143-147.
13. Laskowski, R. A., MacArthur, M. W., Moss, D. S. & Thornton, J. M. (1993). J. Appl. Cryst. 26, 283-291.
14. Lo, Y. C., Lin, S. C., Shaw, J. F. & Liaw, Y. C. (2003). J. Mol. Biol. 330, 539-551.
15. Lovell, S. C., Davis, I. W., Arendall, W. B. III, de Bakker, P. I., Word, J. M., Prisant, M. G., Richardson, J. S. & Richardson, D. C. (2003). Proteins, 50, 437-450.
16. McRee, D. E. (1999). J. Struct. Biol. 125, 156-165.
17. Madej, T., Gibrat, J. F. & Bryant, S. H. (1995). Proteins, 23, 356-369.
18. Molgaard, A., Kauppinen, S. & Larsen, S. (2000). Structure, 8, 373-383.
19. Murshudov, G. N., Vagin, A. A. & Dodson, E. J. (1997). Acta Cryst. D53, 240-255.
20. Otwinowski, Z. & Minor, W. (1997). Methods Enzymol. 276, 307-326.
21. Pearl, F. et al (2005). Nucleic Acids Res. 33, D247-D251.
22. Rosenthal, P. B., Zhang, X., Formanowski, F., Fitz, W., Wong, C. H., Meier-Ewert, H., Skehel, J. J. & Wiley, D. C. (1998). Nature (London), 396, 92-96.
23. Sgraja, T., Ulschmid, J., Becker, K., Schneuwly, S., Klebe, G., Reuter, K. & Heine, A. (2004). J. Mol. Biol. 342, 1613-1624.
24. Sreenath, H. K., Bingman, C. A., Buchan, B. W., Seder, K. D., Burns, B. T., Geetha, H. V., Jeon, W. B., Vojtik, F. C., Aceti, D. J., Frederick, R. O., Phillips, G. N. Jr & Fox, B. G. (2005). Protein Expr. Purif. 40, 256-267.
25. Thao, S., Zhao, Q., Kimball, T., Steffen, E., Blommel, P. G., Riters, M., Newman, C. S., Fox, B. G. & Wrobel, R. L.(2004). J. Struct. Funct. Genomics, 5, 267-276.
26. Upton, C. & Buckley, J. T. (1995). Trends Biochem. Sci. 20, 178-179.
27. Vagin, A. & Teplyakov, A. (1997). J. Appl. Cryst. 30, 1022-1025.
28. Wei, Y., Schottel, J. L., Derewenda, U., Swenson, L., Patkar, S. & Derewenda, Z. S. (1995). Nature Struct. Biol. 2, 218-223.
29. Westhead, D. R., Slidel, T. W., Flores, T. P. & Thornton, J. M. (1999). Protein Sci. 8, 897-904.
30. Zolnai, Z., Lee, P. T., Li, J., Chapman, M. R., Newman, C. S., Phillips, G. N. Jr, Rayment, I., Ulrich, E. L., Volkman, B. E. & Markley, J. L. (2003). J. Struct. Funct. Genomics, 4, 11-23.