An essential gene for fruiting body initiation in the basidiomycete Coprinopsis cinerea is homologous to bacterial cyclopropane fatty acid synthase genes

Genetics

Volumn 172, Issue 2, 2006, Pages 873-884

  Liu, Yi ^a,c   Srivilai, Prayook ^b   Loos, Sabine ^a,d   Aebi, Markus ^a   Kües, Ursula ^b  

^a ETH ZURICH   (Switzerland)

^b UNIVERSITY OF GÖTTINGEN   (Germany)

^c CENTRO DI BIOTECNOLOGIE AVANZATE   (Italy)

^d HANS KNÖLL INSTITUTE   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CYCLOPROPANE; FATTY ACID SYNTHASE;

AMINO ACID SUBSTITUTION; ARTICLE; BACTERIAL GENE; BASIDIOMYCETES; COPRINOPSIS CINEREA; DNA FLANKING REGION; FRUITING BODY; FUNGAL GENE; FUNGUS HYPHAE; GENETIC COMPLEMENTATION; GENETIC DISORDER; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PRIORITY JOURNAL; PROKARYOTE; PROTEIN DOMAIN; PROTEIN INTERACTION; SEQUENCE HOMOLOGY;

AGARICALES; AMINO ACID SEQUENCE; COSMIDS; FRUITING BODIES, FUNGAL; GENES, BACTERIAL; GENES, FUNGAL; METHYLTRANSFERASES; MOLECULAR SEQUENCE DATA; MUTATION; SEQUENCE HOMOLOGY, AMINO ACID; ULTRAVIOLET RAYS;

BACTERIA (MICROORGANISMS); BASIDIOMYCOTA; COPRINOPSIS CINEREA; FUNGI; PROKARYOTA;

EID: 33644751746     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.105.045542     Document Type: Article

References (60)

1. ARIMA, T., M. YAMAMOTO, A. HIRATA, S. KAWANO and T. KAMADA, 2004 The eln3 gene involved in fruiting body morphogenesis of Coprinus cinereus encodes a putative membrane protein with a general glycosyltransferase domain. Fungal Genet. Biol. 41: 805-812.
2. BADALYAN, S. M., E. POLAK, R. HERMANN, M. AEBI and U. KÜES, 2004 Role of peg formation in clamp cell fusion in homobasidiomycete fungi. J. Basic Microbiol. 44: 167-177.
3. BAO, X., J. J. THELEN, G. BONAVENTURA and J. B. OHLROGGE, 2003 Characterization of cyclopropane fatty-acid synthase from Sterculia foetida. J. Biol. Chem. 278: 12846-12853.
4. BERTOSSA, R. C., U. KÜES, M. AEBI and M. KÜNZLER, 2004 Promoter analysis of cgl2, a galectin encoding gene transcribed during fruiting body formation in Coprinopsis cinerea (Coprinus cinereus). Fungal Genet. Biol. 41: 1120-1131.
5. BONZOM, P. M. A., A. NICOLAOU, M. ZLOH, W. BALDEO and W. A. GIBBONS, 1999 NMR lipid profile of Agaricus bisporus. Phytochemistry 50: 1311-1321.
6. + cosmid. J. Microbiol. Methods 35: 129-141.
7. BOULIANNE, R. P., Y. LIU, M. AEBI, B. C. LU and U. KÜES, 2000 Fruiting body development in Coprinus cinereus: regulated expression of two galectins secreted by a non-classical pathway. Microbiology 146: 1841-1853.
8. CHANG, Y. Y., and J. E. CRONAN, JR., 1999 Membrane cyclopropane fatty acid content is a major factor in acid resistance of Escherichia coli. Mol. Microbiol. 33: 249-259.
9. CHOMCZYNSKI, P., and N. SACCHI, 1987 Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162: 156-159.
10. CLERGEOT, P.-H., G. RUPRICH-ROBERT, Y. LIU, S. LOOS, P. SRIVILAI et al., 2003 Mutants in initiation of fruiting body development of the basidiomycete Coprinus cinereus. Fungal Genet. Newsl. 50(Suppl.): 68.
11. COURTOIS, F., C. GUÉRARD, X. THOMAS AND O. PLOUX, 2004 Escherichia coli cyclopropane fatty acid synthase. Mechanistic and site-directed mutagenic studies. Eur. J. Biochem. 271: 4769-4778.
12. COUTO, J. A., N. ROZES and T. HOGG, 1996 Ethanol-induced changes in the fatty acid composition of Lactobacillus hilgardii, its effects on plasma membrane fluidity and relationship with ethanol tolerance. J. Appl. Bacteriol. 81: 126-132.
13. D'AURIA, M. V., L. G. PALOMA, L. MINALE, R. RICCIO and A. ZAMPELLA, 1993 Metabolites of the New Caledonian sponge Cladocroce incurvata. J. Nat. Prod. 56: 418-423.
14. 2H NMR structural and dynamical approach. Biochemistry 23: 2300-2309.
15. FAUMAN, E. B., R. M. BLUMENTHAL and X. D. CHENG, 1999 Structure and evolution of AdoMet-dependent methyltransferases, pp. 1-38 in S-Adenosylmethionine-Dependent Methyltransferases: Structures and Functions, edited by X. D. CHENG and R. M. BLUMENTHAL. World Scientific, Singapore.
16. GALLY, H. U., G. PLUSCHKE, P. OVERATH and J. SEELIG, 1979 Structure of Escherichia coli membranes. Phospholipid conformation in model membranes and cells as studied by deuterium magnetic resonance. Biochemistry 18: 5605-5610.
17. GRANADO, J. D., K. KERTESZ-CHALOUPKOVÁ, M. AEBI and U. KÜES, 1997 Restriction enzyme-mediated DNA intergration in Coprinus cinereus. Mol. Gen. Genet. 256: 28-36.
18. GROGAN, D. W., and J. E. CRONAN, JR., 1997 Cyclopropane ring formation in membrane lipids of bacteria. Microbiol. Mol. Biol. Rev. 61: 429-441.
19. HUANG, C., C. V. SMITH, M. S. GLICKMAN, W. R. JACOBS, JR. and J. C. SACCHETTINI, 2002 Crystal structure of myolic acid cyclopropane synthase from Mycobacterium tubercolosis. J. Biol. Chem. 277: 11559-11569.
20. KAIMAL, T. N. B., and G. LAKSHMINARAYANA, 1970 Fatty acid compositions of lipids isolated from different parts of Ceiba pentandra, Sterculia foetida and Hydnocarpus wightiana. Phytochem. 9: 2225-2229.
21. KAWAI, G., 1989 Molecular species of cerebrosides in fruiting bodies of Lentinus edodes and their biological activity. Biochim. Biophys. Acta 1001: 185-190.
22. KERTESZ-CHALOUPKOVÁ, K., P. J. WALSER, J.D. GRANADO, M. AEBI and U. KÜES, 1998 Blue light overrides repression of asexual sporulation by mating type genes in the basidiomycete Coprinus cinereus. Fungal Genet. Biol. 23: 95-109.
23. KÜES, U., 2000 Life history and developmental processes in the basidiomycete Coprinus cinereus. Microbiol. Mol. Biol. Rev. 64: 316-353.
24. KÜES, U., J. D. GRANADO, R. HERMANN, R. P. BOULIANNE, K. KERTESZ-CHALOUPKOVÁ et al., 1998 The A mating type and blue light regulate all known differentiation processes in the basidiomycete Coprinus cinereus. Mol. Gen. Genet. 260: 81-91.
25. KÜES, U., T. Y. JAMES, R. VILGALYS and M. P. CHALLEN, 2001 The chromosomal region containing pab-1, mip, and the A mating type locus of the secondary homothallic homobasidiomycete Coprinus bilanatus. Curr. Genet. 39: 16-24.
26. KÜES, U., E. POLAK, A. P. F. BOTTOLI, M. HOLLENSTEIN, P. J. WALSER et al., 2002a Vegetative development in Coprinus cinereus, pp. 133-164 in Molecular Biology of Fungal Development, edited by H. D. OSIEWACZ. Marcel Dekker, New York.
27. KÜES, U., P. J. WALSER, M. J. KLAUS and M. AEBI, 2002b Influence of activated A and B mating type pathways on developmental processes in the basidiomycete Coprinus cinereus. Mol. Genet. Genomics 268: 262-271.
28. KÜES, U., M. KÜNZLER, A. P. F. BOTTOLI, P. J. WALSER, J. D. GRANADO et al., 2004 Mushroom development in higher basidiomycetes; implications for human and animal health, pp. 431-470 in Fungi in Human and Animal Health, edited by R. K. S. KUSHWAHA. Scientific Publishers, Jodhpur, India.
29. LEBER, R., E. ZINSER, G. ZELLNIG, F. PALTAUF and G. DAUM, 1994 Characterization of lipid particles of the yeast, Saccharomyces cerevisiae. Yeast 10: 1421-1428.
30. LI, R. X., S. GANGULI and R. A. PASCAL, JR., 1993 Synthesis of sulfur-substituted phosphatidylethanolamines and inhibition of protozoan cyclopropane fatty acid synthase. Tetrahedron Lett. 34: 1279-1282.
31. LU, B. C., and N. B. RAJU, 1970 Meiosis in Coprinus. II. Chromosome pairing and the lampbrush diplotene stage of meiotic prophase. Chromosoma 29: 305-316.
32. LU, B. C., N. GALLO and U. KÜES, 2003 White-cap mutants and meiotic apoptosis in the basidiomycete Coprinus cinereus. Fungal Genet. Biol. 39: 82-93.
33. MAGAE, Y., T. NISHIMURA and S. OHARA, 2004 3-O-alkyl-D-glucose derivatives induce fruit bodies of Pleurotus. Mycol. Res. 109: 374-376.
34. MARCHUK, D., M. DRUMM, A. SAULINO and F. S. COLLINS, 1991 Construction of T-vectors, a rapid and general system for direct cloning of unmodified PCR products. Nucleic Acids Res. 19: 1154.
35. MARINARI, L. A., H. GOLDFINE and C. PANOS, 1974 Specificity of cyclopropane fatty acid synthesis in Escherichia coli. Utilization of isomers of monounsaturated fatty acid. Biochemistry 13: 1978-1983.
36. MATSUOKA, S., H. KUWAYAMA, D. IKENO, M. OYAMA and M. MAEDA, 2004 Defect in peroximal multifunctional enzyme MFE1 affects cAMP relay in Dictyostelium. Dev. Growth Differ. 46: 195-199.
37. MIZUSHINA, Y., L. HANASHIMA, T. YAMAGUCHI, M. TAKEMURA, F. SUGAWARA et al., 1998 A mushroom fruiting body-inducing substance inhibits activities of replicative DNA polymerases. Biochem. Biophys. Res. Commun. 249: 17-22.
38. MOORE, D., M. M. Y. ELHITI and R. D. BUTLER, 1979 Morphogenesis of the carpophore of Coprinus cinereus. New Phytol. 83: 695-722.
39. MURAGUCHI, H., and T. KAMADA, 1998 The ich1 gene of the mushroom Coprinus cinereus is essential for pileus formation in fruiting. Development 125: 3133-3141.
40. MURAGUCHI, H., and T. KAMADA, 2000 A mutation in the eln2 gene encoding a cytochrome P450 of Coprinus cinereus affects mushroom morphogenesis. Fungal Genet. Biol. 29: 49-59.
41. MURATA, Y., M. FUJII, M. E. ZOLAN and T. KAMADA, 1998 Molecular analysis of pcc1, a gene that leads to A-regulated sexual morphogenesis in Coprinus cinereus. Genetics 149: 1753-1761.
42. NAGLE, D. G., and W. H. GERWICK, 1990 Isolation and structure of constanolactones A and B, new cyclopropyl hydroxyeicosanoids from the temperate red alga Constantinea simplex. Tetrahedron Lett. 31: 2995-2998.
43. NES, W. D., B. S. MCCOURT, W. X. ZHOU, J. MA, J. A. MARSHALL et al., 1998 Overexpression, purification, and stereochemical studies of the recombinant (S)-adenosyl-L-methionine: delta 24(25)- to delta 24(28)-sterol methyl transferase enzyme from Saccharomyces cerevisiae. Arch. Biochem. Biophys. 353: 297-311.
44. NES, W. D., P. JAYASIMHA, W. ZHOU, R. KANAGASABAI, C. JIN et al., 2004 Sterol methyltransferase: functional analysis of highly conserved residues by site-directed mutagenesis. Biochemistry 43: 569-576.
45. OITA, S., and S. O. YANAGI, 1993 Stimulation of Schizophyllum commune fruit body formation by inhibitor of membrane function and cell wall synthesis. Biosci. Biotechnol. Biochem. 57: 1270-1274.
46. OUDEJANS, R. C. H. M., and D. J. VAN DER HORST, 1978 Cyclopropane fatty acids in millipedes: their occurrence and metabolism. Abh. Naturwiss. Ver. Hamburg 21/22: 345-348.
47. 2H NMR study of phase transitions and molecular organization. Biochemistry 24: 1055-1063.
48. SAITO, T., and H. OCHIAI, 1998 Fatty acid composition of the cellular slime mold Polysphondylium pallidum. Lipids 33: 327-332.
49. SAJBIDOR, J., 1997 Effect of some environmental factors on the content and composition of microbial membrane lipids. Crit. Rev. Biotechnol. 17: 87-103.
50. SAKAI, H, and S. KAJIWARA, 2004 Membrane lipid profile of an edible basidiomycete Lentinula edodes during growth and cell differentiation. Lipids 39: 67-73.
51. SAMBROOK, J., E. F. FRITSCH and T. MANIATIS, 1989 Molecular Cloning: A Laboratory Manual, Ed. 2. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
52. SEELIG, J., and A. SEELIG, 1980 Lipid conformation in model membranes and biological membranes. Q. Rev. Biophys. 13: 19-61.
53. SOLBERG, Y., 1989 A literature review of the lipid constituents of higher fungi, new investigation of Agaricus species. Int. J. Mycol. Lichenol. 4: 137-154.
54. SWAMY, S., I. UNO and T. ISHIKAWA, 1984 Morphogenetic effects of mutations at the A and B incompatibility factors in Coprinus cinereus. J. Gen. Microbiol. 130: 3219-3224.
55. TAYLOR, F. R., and J. E. CRONAN, JR., 1979 Cyclopropane fatty acid synthase of Escherichia coli: stabilization, purification, and interaction with phospholipid vesicles. Biochemistry 18: 3292-3300.
56. TERASHIMA, K., K. YUKI, H. MURAGUCHI, M. AKIYAMA and T. KAMADA, 2005 The dst1 gene involved in mushroom photomorphogenesis of Coprinus cinereus encodes a putative photoreceptor for blue light. Genetics 171: 101-108.
57. WALSER, P. J., R. VELAGAPUDI, M. AEBI and U. KÜES, 2003 Extracellular matrix proteins in mushroom development. Recent Res. Devel. Microbiol. 7: 381-415.
58. WANG, A. Y., D. W. GROGAN and J. E. CRONAN, JR., 1992 Cyclopropane fatty acid synthase of Escherichia coli: deduced amino acid sequence, purification, and studies of the enzyme active site. Biochemistry 31: 11020-11028.
59. WHITE, J. D., and M. S. JENSEN, 1993 Biomimetic synthesis of a cyclopropane containing eicosanoid from the coral Plexaura homomalla. Assignment of relative configuration. J. Am. Chem. Soc. 115: 2970-2971.
60. ZOLAN, M. E., and P. J. PUKKILA, 1986 Inheritance of DNA methylation in Coprinus cinereus. Mol. Cell. Biol. 6: 195-200.