메뉴 건너뛰기




Volumn 119, Issue 1-2, 2006, Pages 7-16

Methods for transcriptome and proteome research: Applications for studying biology of reproduction in bovine;Methoden der transkriptom- und proteomanalyse: Anwendung für reproduktionsbiologische fragestellungen beim rind

Author keywords

Embryo maternal communication; Fertility; Functional genome analysis; Proteome; Transcriptome

Indexed keywords

PROTEOME;

EID: 30844465495     PISSN: 00059366     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review
Times cited : (5)

References (37)
  • 1
    • 1542350622 scopus 로고    scopus 로고
    • Domestic-animal genomics: Deciphering the genetics of complex traits
    • Andersson, L., M. Georges (2004): Domestic-animal genomics: deciphering the genetics of complex traits. Nat. Rev. Genet. 5, 202-212.
    • (2004) Nat. Rev. Genet. , vol.5 , pp. 202-212
    • Andersson, L.1    Georges, M.2
  • 3
    • 0037378643 scopus 로고    scopus 로고
    • Regulation of ipsilateral and contralateral bovine oviduct epithelial cell function in the postovulation period: A transcriptomics approach
    • Bauersachs, S., H. Blum, S. Mallok, H. Wenigerkind, S. Rief, K. Prelle, E. Wolf (2003): Regulation of ipsilateral and contralateral bovine oviduct epithelial cell function in the postovulation period: a transcriptomics approach. Biol. Reprod. 68, 1170-1177.
    • (2003) Biol. Reprod. , vol.68 , pp. 1170-1177
    • Bauersachs, S.1    Blum, H.2    Mallok, S.3    Wenigerkind, H.4    Rief, S.5    Prelle, K.6    Wolf, E.7
  • 6
    • 22044440025 scopus 로고    scopus 로고
    • Holistic differential analysis of embryo-induced alterations in the proteome of bovine endometrium in the pre-attachment period
    • Berendt, F. J., T. Fröhlich, S. E. M. Schmidt, H.-D. Reichenbach, E. Wolf, G. J. Arnold (2005): Holistic differential analysis of embryo-induced alterations in the proteome of bovine endometrium in the pre-attachment period. Proteomics 5, 2551-2560.
    • (2005) Proteomics , vol.5 , pp. 2551-2560
    • Berendt, F.J.1    Fröhlich, T.2    Schmidt, S.E.M.3    Reichenbach, H.-D.4    Wolf, E.5    Arnold, G.J.6
  • 7
    • 0034056940 scopus 로고    scopus 로고
    • The dynamic range of protein expression: A challenge for proteomic research
    • Corthals, G. L., V. C. Wasinger, D. F. Hochstrasser, J.C. Sanchez (2000): The dynamic range of protein expression: a challenge for proteomic research. Elecrrophoresis 21, 1104-1115.
    • (2000) Elecrrophoresis , vol.21 , pp. 1104-1115
    • Corthals, G.L.1    Wasinger, V.C.2    Hochstrasser, D.F.3    Sanchez, J.C.4
  • 8
    • 15844428981 scopus 로고    scopus 로고
    • Suppression subtractive hybridization: A method for generating differentially regulated or tissue-specific cDNA probes and libraries
    • USA
    • Diatchenko, L., Y. F. Lau, A. P. Campbell et al. (1996): Suppression subtractive hybridization: a method for generating differentially regulated or tissue-specific cDNA probes and libraries. Proc. Natl. Acad. Sci. USA 93, 6025-6030.
    • (1996) Proc. Natl. Acad. Sci. , vol.93 , pp. 6025-6030
    • Diatchenko, L.1    Lau, Y.F.2    Campbell, A.P.3
  • 9
    • 0029095434 scopus 로고
    • Two-dimensional polyacrylamide gel electrophoresis with immobilized pH gradients in the first dimension (IPG-Dalt): The state of the art und the controversy of vertical versus horizontal systems
    • Görg, A., G. Boguth, C. Obermaier, A. Posch, W. Weiss (1995): Two-dimensional polyacrylamide gel electrophoresis with immobilized pH gradients in the first dimension (IPG-Dalt): the state of the art und the controversy of vertical versus horizontal systems. Electrophoresis 16, 1079-1086.
    • (1995) Electrophoresis , vol.16 , pp. 1079-1086
    • Görg, A.1    Boguth, G.2    Obermaier, C.3    Posch, A.4    Weiss, W.5
  • 10
    • 0033016717 scopus 로고    scopus 로고
    • Correlation between protein und mRNA abundance in yeast
    • Gygi, S. P., Y. Rochon, B. R. Franza, R. Aebersold (1999a): Correlation between protein und mRNA abundance in yeast. Mol. Cell. Biol. 19, 1720-1730.
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 1720-1730
    • Gygi, S.P.1    Rochon, Y.2    Franza, B.R.3    Aebersold, R.4
  • 11
    • 0032875697 scopus 로고    scopus 로고
    • Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
    • Gygi, S. P., B. Rist, S. A. Gerber, F. Turecek, M. H. Gelb, R. Aebersold (1999b): Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat. Biotechnol. 17, 994-999.
    • (1999) Nat. Biotechnol. , vol.17 , pp. 994-999
    • Gygi, S.P.1    Rist, B.2    Gerber, S.A.3    Turecek, F.4    Gelb, M.H.5    Aebersold, R.6
  • 12
    • 4444308856 scopus 로고    scopus 로고
    • 5′-End SAGE for the analysis of transcriptional start sites
    • Hashimoto, S., Y. Suzuki, Y. Kasai et al. (2004): 5′-end SAGE for the analysis of transcriptional start sites. Nat. Biotechnol. 22, 1146-1149.
    • (2004) Nat. Biotechnol. , vol.22 , pp. 1146-1149
    • Hashimoto, S.1    Suzuki, Y.2    Kasai, Y.3
  • 13
    • 0346242741 scopus 로고    scopus 로고
    • Efficient transgenesis in farm animals by lentiviral vectors
    • Hofmann, A., B. Kessler, S. Ewerling et al. (2003): Efficient transgenesis in farm animals by lentiviral vectors. EMBO Rep. 4, 1054-1060.
    • (2003) EMBO Rep. , vol.4 , pp. 1054-1060
    • Hofmann, A.1    Kessler, B.2    Ewerling, S.3
  • 15
    • 0037447251 scopus 로고    scopus 로고
    • Comprehensive sampling of gene expression in human cell lines with massively parallel signature sequencing
    • USA
    • Jongeneel, C. V., C. Iseli, B. J. Stevenson et al. (2003): Comprehensive sampling of gene expression in human cell lines with massively parallel signature sequencing. Proc. Natl. Acad. Sci. USA 100, 4702-4705.
    • (2003) Proc. Natl. Acad. Sci. , vol.100 , pp. 4702-4705
    • Jongeneel, C.V.1    Iseli, C.2    Stevenson, B.J.3
  • 16
    • 3543121341 scopus 로고    scopus 로고
    • Quantification in proteomics through stable isotope coding: A review
    • Julka, S., F. Regnier (2004): Quantification in proteomics through stable isotope coding: a review. J. Proteome Res. 3, 350-363.
    • (2004) J. Proteome Res. , vol.3 , pp. 350-363
    • Julka, S.1    Regnier, F.2
  • 17
    • 31044439162 scopus 로고    scopus 로고
    • Monozygotic twin model reveals novel embryo-induced transcriptome changes of bovine endometrium in the preattachment period
    • in press
    • Klein, C., S. Bauersachs, S. E. Ulbrich et al. (2005): Monozygotic twin model reveals novel embryo-induced transcriptome changes of bovine endometrium in the preattachment period. Biol. Reprod. 74, in press.
    • (2005) Biol. Reprod. , vol.74
    • Klein, C.1    Bauersachs, S.2    Ulbrich, S.E.3
  • 18
    • 4043162145 scopus 로고    scopus 로고
    • Quantitative trait loci mapping of functional traits in the German Holstein cattle population
    • Kühn, C., J. Bennewitz, N. Reinsch et al. (2002): Quantitative trait loci mapping of functional traits in the German Holstein cattle population. J. Dairy Sci. 86, 360-368.
    • (2002) J. Dairy Sci. , vol.86 , pp. 360-368
    • Kühn, C.1    Bennewitz, J.2    Reinsch, N.3
  • 20
    • 0000828701 scopus 로고    scopus 로고
    • Proteomanalyse - Ein Weg zur Funktionsanalyse von Proteinen
    • Lottspeich, F. (1999): Proteomanalyse - ein Weg zur Funktionsanalyse von Proteinen. Angew. Chem. 111, 2690-2647.
    • (1999) Angew. Chem. , vol.111 , pp. 2690-12647
    • Lottspeich, F.1
  • 21
    • 0028002025 scopus 로고
    • Electrospray mass spectrometry und tandem mass spectrometry of synthetic multicomponent peptide mixtures: Determination of composition und purity
    • Metzger, J. W., C. Kempter, K. H. Wiesmüller, G. Jung (1994): Electrospray mass spectrometry und tandem mass spectrometry of synthetic multicomponent peptide mixtures: determination of composition und purity. Anal. Biochem. 219, 261-277.
    • (1994) Anal. Biochem. , vol.219 , pp. 261-277
    • Metzger, J.W.1    Kempter, C.2    Wiesmüller, K.H.3    Jung, G.4
  • 22
    • 0035095516 scopus 로고    scopus 로고
    • Insulin-like growth factor I (IGF-I) and long R(3)IGF-I differently affect development and messenger ribonucleic acid abundance for IGF-binding proteins and type I IGF receptors in in vitro produced bovine embryos
    • Prelle, K., M. Stojkovic, K. Boxhammer, J. Motlik, D. Ewald, G. J. Arnold, E. Wolf (2001): Insulin-like growth factor I (IGF-I) and long R(3)IGF-I differently affect development and messenger ribonucleic acid abundance for IGF-binding proteins and type I IGF receptors in in vitro produced bovine embryos. Endocrinology 142, 1309-1316.
    • (2001) Endocrinology , vol.142 , pp. 1309-1316
    • Prelle, K.1    Stojkovic, M.2    Boxhammer, K.3    Motlik, J.4    Ewald, D.5    Arnold, G.J.6    Wolf, E.7
  • 23
    • 0041173901 scopus 로고    scopus 로고
    • Breeding for disease resistance in Merino sheep in Australia
    • Raadsma, H. W., G. D. Gray, R. R. Woolaston (1998): Breeding for disease resistance in Merino sheep in Australia. Rev. Sci. Tech. 17, 315-328.
    • (1998) Rev. Sci. Tech. , vol.17 , pp. 315-328
    • Raadsma, H.W.1    Gray, G.D.2    Woolaston, R.R.3
  • 24
    • 19944432197 scopus 로고    scopus 로고
    • Multiplexed protein quanritation in saccharomyces cerevisiae using amine-reactive isobaric tagging reagents
    • Ross, P. L., Y. N. Huang, J. N. Marchese et al. (2004): Multiplexed protein quanritation in saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol. Cell. Proteomics 3, 1154-1169.
    • (2004) Mol. Cell. Proteomics , vol.3 , pp. 1154-1169
    • Ross, P.L.1    Huang, Y.N.2    Marchese, J.N.3
  • 25
    • 0242490957 scopus 로고    scopus 로고
    • Genetics of resistance to mastitis in dairy cattle
    • Rupp, R., D. Boichard (2003): Genetics of resistance to mastitis in dairy cattle. Vet. Res. 34, 671-688.
    • (2003) Vet. Res. , vol.34 , pp. 671-688
    • Rupp, R.1    Boichard, D.2
  • 26
    • 13244260803 scopus 로고    scopus 로고
    • A novel strategy for quantitative proteomics using isotope-coded protein labels
    • Schmidt, A., J. Kellermann, F. Lottspeich (2005): A novel strategy for quantitative proteomics using isotope-coded protein labels. Proteomics 5, 4-15.
    • (2005) Proteomics , vol.5 , pp. 4-15
    • Schmidt, A.1    Kellermann, J.2    Lottspeich, F.3
  • 27
    • 17744387703 scopus 로고    scopus 로고
    • Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle
    • Smith, T. P., W. M. Grosse, B. A. Freking et al. (2001): Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Genome Res. 11, 626-630.
    • (2001) Genome Res. , vol.11 , pp. 626-630
    • Smith, T.P.1    Grosse, W.M.2    Freking, B.A.3
  • 28
    • 0036017945 scopus 로고    scopus 로고
    • Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index
    • Sonstegard, T. S., A. V. Capuco, J. White et al. (2002): Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Mamm. Genome 13, 373-379.
    • (2002) Mamm. Genome , vol.13 , pp. 373-379
    • Sonstegard, T.S.1    Capuco, A.V.2    White, J.3
  • 30
    • 0030552886 scopus 로고    scopus 로고
    • Investigation of the inheritance of birth defects in swine by complex segregation analysis
    • Thaller, G., L. Dempfle, I. Hoeschele (1996): Investigation of the inheritance of birth defects in swine by complex segregation analysis. J. Anim. Breed. Genet. 113, 77-92.
    • (1996) J. Anim. Breed. Genet. , vol.113 , pp. 77-92
    • Thaller, G.1    Dempfle, L.2    Hoeschele, I.3
  • 31
    • 0035289178 scopus 로고    scopus 로고
    • Validation and development of fluorescence two-dimensional differential gel electrophoresis proteomics technology
    • Tonge, R., J. Shaw, B. Middleton et al. (2001): Validation and development of fluorescence two-dimensional differential gel electrophoresis proteomics technology. Proteomics 1, 377-396.
    • (2001) Proteomics , vol.1 , pp. 377-396
    • Tonge, R.1    Shaw, J.2    Middleton, B.3
  • 32
    • 0343376097 scopus 로고    scopus 로고
    • Difference gel electrophoresis: A single gel method for detecting changes in protein extracts
    • Unlu, M., M. E. Morgan, J. S. Minden (1997): Difference gel electrophoresis: a single gel method for detecting changes in protein extracts. Electrophoresis 18, 2071-2077.
    • (1997) Electrophoresis , vol.18 , pp. 2071-2077
    • Unlu, M.1    Morgan, M.E.2    Minden, J.S.3
  • 34
    • 10544244583 scopus 로고    scopus 로고
    • Cloning differentially expressed mRNAs
    • Wan, J. S., S. J. Sharp, G. M. Poirier et al. (1996): Cloning differentially expressed mRNAs. Nat. Biotechnol. 14, 1685-1691.
    • (1996) Nat. Biotechnol. , vol.14 , pp. 1685-1691
    • Wan, J.S.1    Sharp, S.J.2    Poirier, G.M.3
  • 35
    • 23444460778 scopus 로고    scopus 로고
    • Pigs in sequence space: A 0.66X coverage pig genome survey based on shotgun sequencing
    • Wernersson R., M. H. Schierup, F. G. Jorgensen et al. (2005): Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing. BMC Genomics 6, 70.
    • (2005) BMC Genomics , vol.6 , pp. 70
    • Wernersson, R.1    Schierup, M.H.2    Jorgensen, F.G.3
  • 36
    • 4143148653 scopus 로고    scopus 로고
    • 5′ Long serial analysis of gene expression (LongSAGE) and 3′ LongSAGE for rranscriptome characterization and genome annotation
    • USA
    • Wie, C. L., P. Ng, K. P. Chiu, C. H. Wong, C. C. Ang, L. Lipovich, E. T. Liu, Y. Ruan (2004): 5′ Long serial analysis of gene expression (LongSAGE) and 3′ LongSAGE for rranscriptome characterization and genome annotation. Proc. Natl. Acad. Sci. USA 101, 11701-11706.
    • (2004) Proc. Natl. Acad. Sci. , vol.101 , pp. 11701-11706
    • Wie, C.L.1    Ng, P.2    Chiu, K.P.3    Wong, C.H.4    Ang, C.C.5    Lipovich, L.6    Liu, E.T.7    Ruan, Y.8
  • 37
    • 0042355708 scopus 로고    scopus 로고
    • Embryo-maternal communication in bovine - Strategies for deciphering a complex cross-talk
    • Wolf, E., G. J. Arnold, S. Bauersachs et al. (2003): Embryo-maternal communication in bovine - strategies for deciphering a complex cross-talk. Reprod. Domest. Anim. 38, 276-289.
    • (2003) Reprod. Domest. Anim. , vol.38 , pp. 276-289
    • Wolf, E.1    Arnold, G.J.2    Bauersachs, S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.