Comprehensive sampling of gene expression in human cell lines with massively parallel signature sequencing

Proceedings of the National Academy of Sciences of the United States of America

Volumn 100, Issue 8, 2003, Pages 4702-4705

  Jongeneel, C Victor ^a,f   Iseli, Christian ^a   Stevenson, Brian J ^a   Riggins, Gregory J ^e   Lal, Anita ^e   Mackay, Alan ^d   Harris, Robert A ^d   O'Hare, Michael J ^d   Neville, A Munro ^b   Simpson, Andrew J G ^b   Strausberg, Robert L ^c  

^a SWISS INSTITUTE OF BIOINFORMATICS   (Switzerland)

^b LUDWIG INSTITUTE FOR CANCER RESEARCH   (Australia)

^c NATIONAL CANCER INSTITUTE   (United States)

^d UNIVERSITY COLLEGE LONDON   (United Kingdom)

^e DUKE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^f LUDWIG INSTITUTE FOR CANCER RESEARCH   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CELL LINE; CELL SPECIFICITY; CONTROLLED STUDY; GENE EXPRESSION; GENE LOCATION; GENE MAPPING; GENETIC TRANSCRIPTION; HUMAN; HUMAN CELL; POLYADENYLATION; PRIORITY JOURNAL; SEQUENCE TAGGED SITE; TECHNIQUE;

ADENOCARCINOMA; BREAST; CELL LINE; COLONIC NEOPLASMS; EPITHELIUM; EXPRESSED SEQUENCE TAGS; FEMALE; GENE EXPRESSION; GENE EXPRESSION PROFILING; HUMANS; POLYMORPHISM, SINGLE NUCLEOTIDE; RNA, MESSENGER;

EUKARYOTA;

EID: 0037447251     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0831040100     Document Type: Article

References (18)

1. Adams, M. D., Soares, M. B., Kerlavage, A. R., Fields, C. & Venter, J. C. (1993) Nat. Genet. 4, 373-380.
2. Strausberg, R. L. & Riggins, G. J. (2001) Proc. Natl. Acad. Sci. USA 98, 11837-11838.
3. Camargo, A. A., Samaia, H. P. B., Dias-Neto, E., Simaia, D. F., Migotto, I. A., Briones, M. R., Costa, F. F., Nagai, M. A., Verjovski-Almeida, S., Zago, M. A., et al. (2001) Proc. Natl. Acad. Sci. USA 98, 12103-12108.
4. Velculescu, V. E., Zhang, L., Vogelstein, B. & Kinzler, K. W. (1995) Science 270, 484-487.
5. Lal, A., Lash, A. E., Altschul, S. F., Velculescu, V., Zhang, L., McLendon, R. E., Marra, M. A., Prange, C., Morin, P. J., Polyak, K., et al. (1999) Cancer Res. 59, 5403-5407.
6. Bishop, J. O., Morton, J. G., Rosbash, M. & Richardson, M. (1974) Nature 250, 199-204.
7. Brenner, S., Johnson, M., Bridgham, J., Golda, G., Lloyd, D. H., Johnson, D., Luo, S., McCurdy, S., Foy, M., Ewan, M., et al. (2000) Nat. Biotechnol. 18, 630-634.
8. Harris, R. A., Hiles, I. D., Page, M. J. & O'Hare, M. J. (1995) Br. J. Cancer 72, 386-392.
9. Brattain, M. G., Fine, W. D., Khaled, F. M., Thompson, J. & Brattain, D. E. (1981) Cancer Res. 41, 1751-1756.
10. Brenner, S., Williams, S. R., Vermaas, E. H., Storck, T., Moon, K., McCollum, C., Mao, J. I., Luo, S., Kirchner, J. J., Eletr, S., et al. (2000) Proc. Natl. Acad. Sci. USA 97, 1665-1670.
11. Iseli, C., Stevenson, B. J., De Souza, S. J., Samaia, H. B., Camargo, A. A., Buetow, K. H., Strausberg, R. L., Simpson, A. J., Bucher, P. & Jongeneel, C. V. (2002) Genome Res. 12, 1068-1074.
12. Velculescu, V. E., Madden, S. L., Zhang, L., Lash, A. E., Yu, J., Rago, C., Lal, A., Wang, C. J., Beaudry, G. A., Ciriello, K. M., et al. (1999) Nat. Genet. 23, 387-388.
13. Chen, J., Sun, M., Lee, S., Zhou, G., Rowley, J. D. & Wang, S. M. (2002) Proc. Natl. Acad. Sci. USA 99, 12257-12262.
14. Chomez, P., De Backer, O., Bertrand, M., De Plaen, E., Boon, T. & Lucas, S. (2001) Cancer Res. 61, 5544-5551.
15. Boon, K., Osorio, E. C., Greenhut, S. F., Schaefer, C. F., Shoemaker, J., Polyak, K., Morin, P. J., Buetow, K. H., Strausberg, R. L., De Souza, S. J. & Riggins, G. J. (2002) Proc. Natl. Acad. Sci. USA 99, 11287-11292.
16. Pauws, E., van Kampen, A. H., van de Graaf, S. A., de Vijlder, J. J. & Ris-Stalpers, C. (2001) Nucleic Acids Res. 29, 1690-1694.
17. Strausberg, R. L., Buetow, K. H., Greenhut, S. F., Grouse, L. H. & Schaefer, C. F. (2002) Cancer Invest. 20, 1038-1050.
18. Hastie, N. D. & Bishop, J. O. (1976) Cell 9, 761-774.