-
1
-
-
0036842986
-
Genome sequence of the endocellular obligate symbiont of tsetse flies, Wigglesworthia glossinidia
-
Akman, L., A. Yamashita, H. Watanabe, K. Oshima, T. Shiba, M. Hattori, and S. Aksoy. 2002. Genome sequence of the endocellular obligate symbiont of tsetse flies, Wigglesworthia glossinidia. Nat. Genet. 32:402-407.
-
(2002)
Nat. Genet.
, vol.32
, pp. 402-407
-
-
Akman, L.1
Yamashita, A.2
Watanabe, H.3
Oshima, K.4
Shiba, T.5
Hattori, M.6
Aksoy, S.7
-
2
-
-
0242416455
-
Wolbachia: Evolutionary novelty in a rickettsial bacteria
-
Anderson, C. L., and T. L. Karr. 2001. Wolbachia: evolutionary novelty in a rickettsial bacteria. Evol. Biol. 1:10.
-
(2001)
Evol. Biol.
, vol.1
, pp. 10
-
-
Anderson, C.L.1
Karr, T.L.2
-
3
-
-
0032777154
-
Insights into the evolutionary process of genome degradation
-
Andersson, J. O., and S. G. E. Andersson. 1999. Insights into the evolutionary process of genome degradation. Curr. Opin. Genet. Dev. 9:664-671.
-
(1999)
Curr. Opin. Genet. Dev.
, vol.9
, pp. 664-671
-
-
Andersson, J.O.1
Andersson, S.G.E.2
-
4
-
-
22544461905
-
Mosaic nature of wsp (Wolbachia surface protein)
-
Baldo, L., N. Lo, and J. H. Werren. 2005. Mosaic nature of wsp (Wolbachia surface protein). J. Bacteriol. 187:5406-5418.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 5406-5418
-
-
Baldo, L.1
Lo, N.2
Werren, J.H.3
-
5
-
-
0032559054
-
Phylogeny of Wolbachia in filarial nematodes
-
Bandi, C., C. G. Anderson, C. Genchi, and M. L. Blaxter. 1998. Phylogeny of Wolbachia in filarial nematodes. Proc. R. Soc. Lond. B Biol. Sci. 265:2407-2413.
-
(1998)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.265
, pp. 2407-2413
-
-
Bandi, C.1
Anderson, C.G.2
Genchi, C.3
Blaxter, M.L.4
-
7
-
-
28844506360
-
Discovery of a novel Wolbachia supergroup in Isoptera
-
in press
-
Bordenstein, S. R., and R. B. Rosengaus. 2005. Discovery of a novel Wolbachia supergroup in Isoptera. Curr. Microbiol. (in press).
-
(2005)
Curr. Microbiol.
-
-
Bordenstein, S.R.1
Rosengaus, R.B.2
-
8
-
-
4944228947
-
Bacteriophage flux in endosymbionts (Wolbachia): Infection frequency, lateral transfer, and recombination rates
-
Bordenstein, S. R., and J. J. Wernegreen. 2004. Bacteriophage flux in endosymbionts (Wolbachia): infection frequency, lateral transfer, and recombination rates. Mol. Biol. Evol. 21:1981-1991.
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 1981-1991
-
-
Bordenstein, S.R.1
Wernegreen, J.J.2
-
9
-
-
0242276676
-
Lateral gene transfer and the origins of prokaryotic groups
-
Boucher, Y., C. J. Douady, R. T. Papke, D. A. Walsh, M. E. Boudreau, C. L. Nesbo, R. J. Case, and W. F. Doolittle. 2003. Lateral gene transfer and the origins of prokaryotic groups. Annu. Rev. Genet. 37:283-328.
-
(2003)
Annu. Rev. Genet.
, vol.37
, pp. 283-328
-
-
Boucher, Y.1
Douady, C.J.2
Papke, R.T.3
Walsh, D.A.4
Boudreau, M.E.5
Nesbo, C.L.6
Case, R.J.7
Doolittle, W.F.8
-
10
-
-
0036010483
-
Antigenic variation of Anaplasma marginale msp2 occurs by combinatorial gene conversion
-
Brayton, K. A., G. H. Palmer, A. Lundgren, J. Yi, and A. F. Barbet. 2002. Antigenic variation of Anaplasma marginale msp2 occurs by combinatorial gene conversion. Mol. Microbiol. 43:1151-1159.
-
(2002)
Mol. Microbiol.
, vol.43
, pp. 1151-1159
-
-
Brayton, K.A.1
Palmer, G.H.2
Lundgren, A.3
Yi, J.4
Barbet, A.F.5
-
11
-
-
0028098176
-
Variability of a bacterial surface protein and disease expression in a possible mouse model of systemic Lyme borreliosis
-
Cadavid, D., D. D. Thomas, R. Crawley, and A. G. Barbour. 1994. Variability of a bacterial surface protein and disease expression in a possible mouse model of systemic Lyme borreliosis. J. Exp. Med. 179:631-642.
-
(1994)
J. Exp. Med.
, vol.179
, pp. 631-642
-
-
Cadavid, D.1
Thomas, D.D.2
Crawley, R.3
Barbour, A.G.4
-
12
-
-
29244466149
-
Phylogeny of Wolbachia based on gltA, groEL and ftsZ gene sequences: Clustering of arthropod and nematode symbionts in the F supergroup and evidence for further diversity in the Wolbachia tree
-
in press
-
Casiraghi, M., S. R. Bordenstein, L. Baldo, N. Lo, T. Beninati, J. J. Wernegreen, J. H. Werren, and C. Bandi. 2005. Phylogeny of Wolbachia based on gltA, groEL and ftsZ gene sequences: clustering of arthropod and nematode symbionts in the F supergroup and evidence for further diversity in the Wolbachia tree. Microbiology (in press).
-
(2005)
Microbiology
-
-
Casiraghi, M.1
Bordenstein, S.R.2
Baldo, L.3
Lo, N.4
Beninati, T.5
Wernegreen, J.J.6
Werren, J.H.7
Bandi, C.8
-
13
-
-
0035058265
-
Wolbachia infection in crustaceans: Novel hosts and potential routes for horizontal transmission
-
Cordaux, R., A. Michel-Salzat, and D. Bouchon. 2001. Wolbachia infection in crustaceans: novel hosts and potential routes for horizontal transmission. J. Evol. Biol. 14:237-243.
-
(2001)
J. Evol. Biol.
, vol.14
, pp. 237-243
-
-
Cordaux, R.1
Michel-Salzat, A.2
Bouchon, D.3
-
14
-
-
0842287972
-
Detection and phylogenetic analysis of Wolbachia in Collembola
-
Czarnetzki, A. B., and C. C. Tebbe. 2004. Detection and phylogenetic analysis of Wolbachia in Collembola. Environ. Microbiol. 6:35-44.
-
(2004)
Environ. Microbiol.
, vol.6
, pp. 35-44
-
-
Czarnetzki, A.B.1
Tebbe, C.C.2
-
15
-
-
0042073066
-
Loss of DNA recombinational repair enzymes in the initial stages of genome degeneration
-
Dale, C., B. Wang, N. Moran, and H. Ochman. 2003. Loss of DNA recombinational repair enzymes in the initial stages of genome degeneration. Mol. Biol. Evol. 20:1188-1194.
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 1188-1194
-
-
Dale, C.1
Wang, B.2
Moran, N.3
Ochman, H.4
-
16
-
-
23744515783
-
Genome sequence of Blochmannia pennsylvanicus indicates parallel evolutionary trends among bacterial mutualists of insects
-
Degnan, P. H., A. B. Lazarus, and J. J. Wernegreen. 2005. Genome sequence of Blochmannia pennsylvanicus indicates parallel evolutionary trends among bacterial mutualists of insects. Genome Res. 15:1023-1033.
-
(2005)
Genome Res.
, vol.15
, pp. 1023-1033
-
-
Degnan, P.H.1
Lazarus, A.B.2
Wernegreen, J.J.3
-
18
-
-
17644412038
-
Transposable element polymorphism of Wolbachia in the mosquito Culex pipiens: Evidence of genetic diversity, superinfection and recombination
-
Duron, O., J. Lagnel, M. Raymond, K. Bourtzis, P. Fort, and M. Weill. 2005. Transposable element polymorphism of Wolbachia in the mosquito Culex pipiens: evidence of genetic diversity, superinfection and recombination. Mol. Ecol. 14:1561-1573.
-
(2005)
Mol. Ecol.
, vol.14
, pp. 1561-1573
-
-
Duron, O.1
Lagnel, J.2
Raymond, M.3
Bourtzis, K.4
Fort, P.5
Weill, M.6
-
19
-
-
17744374506
-
Evolution of RAG-1 in polyploid clawed frogs
-
Evans, B. J., D. B. Kelley, D. J. Melnick, and D. C. Cannatella. 2005. Evolution of RAG-1 in polyploid clawed frogs. Mol. Biol. Evol. 22:1193-1207.
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 1193-1207
-
-
Evans, B.J.1
Kelley, D.B.2
Melnick, D.J.3
Cannatella, D.C.4
-
20
-
-
0026521898
-
Role of horizontal genetic exchange in the antigenic variation of the class 1 outer membrane protein of Neisseria meningitidis
-
Feavers, I. M., A. B. Heath, J. A. Bygraves, and M. C. Maiden. 1992. Role of horizontal genetic exchange in the antigenic variation of the class 1 outer membrane protein of Neisseria meningitidis. Mol. Microbiol. 6:489-495.
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 489-495
-
-
Feavers, I.M.1
Heath, A.B.2
Bygraves, J.A.3
Maiden, M.C.4
-
21
-
-
0034769889
-
Recombination and the population structures of bacterial pathogens
-
Feil, E. J., and B. G. Spratt. 2001. Recombination and the population structures of bacterial pathogens. Annu. Rev. Microbiol. 55:561-590.
-
(2001)
Annu. Rev. Microbiol.
, vol.55
, pp. 561-590
-
-
Feil, E.J.1
Spratt, B.G.2
-
22
-
-
21144432943
-
The Wolbachia genome of Brugia malayi: Endosymbiont evolution within a human pathogenic nematode
-
Foster, J., M. Ganatra, Kamal, I. et al. (26 co-authors). 2005. The Wolbachia genome of Brugia malayi: endosymbiont evolution within a human pathogenic nematode. PLoS Biol. 3:e121.
-
(2005)
PLoS Biol.
, vol.3
-
-
Foster, J.1
Ganatra, M.2
Kamal, I.3
-
23
-
-
0036021697
-
Genome deterioration: Loss of repeated sequences and accumulation of junk DNA
-
Frank, A. C., H. Amiri, and S. G. Andersson. 2002. Genome deterioration: loss of repeated sequences and accumulation of junk DNA. Genetica 115:1-12.
-
(2002)
Genetica
, vol.115
, pp. 1-12
-
-
Frank, A.C.1
Amiri, H.2
Andersson, S.G.3
-
24
-
-
0024553011
-
Reassortment of pilin genes in Neisseria gonorrhoeae occurs by two distinct mechanisms
-
Gibbs, C. P., B. Y. Reimann, E. Schultz, A. Kaufmann, R. Haas, and T. F. Meyer. 1989. Reassortment of pilin genes in Neisseria gonorrhoeae occurs by two distinct mechanisms. Nature 338:651-652.
-
(1989)
Nature
, vol.338
, pp. 651-652
-
-
Gibbs, C.P.1
Reimann, B.Y.2
Schultz, E.3
Kaufmann, A.4
Haas, R.5
Meyer, T.F.6
-
25
-
-
0041422250
-
The genome sequence of Blochmannia floridanus: Comparative analysis of reduced genomes
-
USA
-
Gil, R., F. J. Silva, E. Zientz et al. (13 co-authors). 2003. The genome sequence of Blochmannia floridanus: comparative analysis of reduced genomes. Proc. Natl. Acad. Sci. USA 100:9388-9393.
-
(2003)
Proc. Natl. Acad. Sci.
, vol.100
, pp. 9388-9393
-
-
Gil, R.1
Silva, F.J.2
Zientz, E.3
-
26
-
-
0141566378
-
Wolbachia distribution and cytoplasmic incompatibility based on a survey of 42 spider mite species (Acari: Tetranychidae) in Japan
-
Gotoh, T., H. Noda, and X. Y. Hong. 2003. Wolbachia distribution and cytoplasmic incompatibility based on a survey of 42 spider mite species (Acari: Tetranychidae) in Japan. Heredity 91:208-216.
-
(2003)
Heredity
, vol.91
, pp. 208-216
-
-
Gotoh, T.1
Noda, H.2
Hong, X.Y.3
-
27
-
-
0030606233
-
Pathogenicity islands: Bacterial evolution in quantum leaps
-
Groisman, E. A., and H. Ochman. 1996. Pathogenicity islands: bacterial evolution in quantum leaps. Cell 87:791-794.
-
(1996)
Cell
, vol.87
, pp. 791-794
-
-
Groisman, E.A.1
Ochman, H.2
-
28
-
-
1942539317
-
Molecular evolution and mosaicism of leptospiral outer membrane proteins involves horizontal DNA transfer
-
Haake, D. A., M. A. Suchard, M. M. Kelley, M. Dundoo, D. P. Alt, and R. L. Zuerner. 2004. Molecular evolution and mosaicism of leptospiral outer membrane proteins involves horizontal DNA transfer. J. Bacteriol. 186:2818-2828.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 2818-2828
-
-
Haake, D.A.1
Suchard, M.A.2
Kelley, M.M.3
Dundoo, M.4
Alt, D.P.5
Zuerner, R.L.6
-
29
-
-
0030901705
-
Pathogenicity islands of virulent bacteria: Structure, function and impact on microbial evolution
-
Hacker, J., G. Blum-Oehler, I. Muhldorfer, and H. Tschape. 1997. Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution. Mol. Microbiol. 23:1089-1097.
-
(1997)
Mol. Microbiol.
, vol.23
, pp. 1089-1097
-
-
Hacker, J.1
Blum-Oehler, G.2
Muhldorfer, I.3
Tschape, H.4
-
30
-
-
0002051540
-
BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall, T. A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41:95-98.
-
(1999)
Nucleic Acids Symp. Ser.
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
31
-
-
0033053213
-
The influence of recombination on the population structure and evolution of the human pathogen Neisseria meningitidis
-
Holmes, E. C., R. Urwin, and M. C. Maiden. 1999. The influence of recombination on the population structure and evolution of the human pathogen Neisseria meningitidis. Mol. Biol. Evol. 16:741-749.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 741-749
-
-
Holmes, E.C.1
Urwin, R.2
Maiden, M.C.3
-
32
-
-
0033813156
-
Molecular models accounting for the gene conversion reactions mediating gonococcal pilin antigenic variation
-
Howell-Adams, B., and H. S. Seifert. 2000. Molecular models accounting for the gene conversion reactions mediating gonococcal pilin antigenic variation. Mol. Microbiol. 37: 1146-1158.
-
(2000)
Mol. Microbiol.
, vol.37
, pp. 1146-1158
-
-
Howell-Adams, B.1
Seifert, H.S.2
-
33
-
-
21844441807
-
Distribution, expression, and motif variability of ankyrin domain genes in Wolbachia pipientis
-
Iturbe-Ormaetxe, I., G. R. Burke, M. Riegler, and S. L. O'Neill. 2005. Distribution, expression, and motif variability of ankyrin domain genes in Wolbachia pipientis. J. Bacteriol. 187:5136-5145.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 5136-5145
-
-
Iturbe-Ormaetxe, I.1
Burke, G.R.2
Riegler, M.3
O'Neill, S.L.4
-
34
-
-
0036595304
-
Horizontal gene transfer in microbial genome evolution
-
Jain, R., M. C. Rivera, J. E. Moore, and J. A. Lake. 2002. Horizontal gene transfer in microbial genome evolution. Theor. Popul. Biol. 61:489-495.
-
(2002)
Theor. Popul. Biol.
, vol.61
, pp. 489-495
-
-
Jain, R.1
Rivera, M.C.2
Moore, J.E.3
Lake, J.A.4
-
35
-
-
0033818145
-
Long PCR improves Wolbachia DNA amplification: Wsp sequences found in 76% of sixty-three arthropod species
-
Jeyaprakash, A., and M. A. Hoy. 2000. Long PCR improves Wolbachia DNA amplification: wsp sequences found in 76% of sixty-three arthropod species. Insect Mol. Biol. 9: 393-405.
-
(2000)
Insect Mol. Biol.
, vol.9
, pp. 393-405
-
-
Jeyaprakash, A.1
Hoy, M.A.2
-
36
-
-
0036728258
-
The rate of recombination in Wolbachia bacteria
-
Jiggins, F. M. 2002. The rate of recombination in Wolbachia bacteria. Mol. Biol. Evol. 19:1640-1643.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1640-1643
-
-
Jiggins, F.M.1
-
37
-
-
0035993662
-
Recent changes in phenotype and patterns of host specialization in Wolbachia bacteria
-
Jiggins, F. M., J. K. Bentley, M. E. Majerus, and G. D. Hurst. 2002. Recent changes in phenotype and patterns of host specialization in Wolbachia bacteria. Mol. Ecol. 11:1275-1283.
-
(2002)
Mol. Ecol.
, vol.11
, pp. 1275-1283
-
-
Jiggins, F.M.1
Bentley, J.K.2
Majerus, M.E.3
Hurst, G.D.4
-
38
-
-
0034935525
-
Recombination confounds interpretations of Wolbachia evolution
-
Jiggins, F. M., J. H. von Der Schulenburg, G. D. Hurst, and M. E. Majerus. 2001. Recombination confounds interpretations of Wolbachia evolution. Proc. R. Soc. Lond. B Biol. Sci. 268:1423-1427.
-
(2001)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.268
, pp. 1423-1427
-
-
Jiggins, F.M.1
Von Der Schulenburg, J.H.2
Hurst, G.D.3
Majerus, M.E.4
-
39
-
-
3242710606
-
Reproductive effects and geographical distributions of two Wolbachia strains infecting the Neotropical beetle, Chelymorpha alternans Boh. (Chrysomelidae, Cassidinae)
-
Keller, G. P., D. M. Windsor, J. M. Saucedo, and J. H. Werren. 2004. Reproductive effects and geographical distributions of two Wolbachia strains infecting the Neotropical beetle, Chelymorpha alternans Boh. (Chrysomelidae, Cassidinae). Mol. Ecol. 13:2405-2420.
-
(2004)
Mol. Ecol.
, vol.13
, pp. 2405-2420
-
-
Keller, G.P.1
Windsor, D.M.2
Saucedo, J.M.3
Werren, J.H.4
-
40
-
-
0034780910
-
Horizontal gene transfer in prokaryotes: Quantification and classification
-
Koonin, E. V., K. S. Makarova, and L. Aravind. 2001. Horizontal gene transfer in prokaryotes: quantification and classification. Annu. Rev. Microbiol. 55:709-742.
-
(2001)
Annu. Rev. Microbiol.
, vol.55
, pp. 709-742
-
-
Koonin, E.V.1
Makarova, K.S.2
Aravind, L.3
-
41
-
-
0242490943
-
Lateral gene transfer: When will adolescence end?
-
Lawrence, J. G., and H. Hendrickson. 2003. Lateral gene transfer: when will adolescence end? Mol. Microbiol. 50:739-749.
-
(2003)
Mol. Microbiol.
, vol.50
, pp. 739-749
-
-
Lawrence, J.G.1
Hendrickson, H.2
-
42
-
-
18244379036
-
Horizontal transfer of the high-pathogenicity island of Yersinia pseudotuberculosis
-
Lesic, B., and E. Carniel. 2005. Horizontal transfer of the high-pathogenicity island of Yersinia pseudotuberculosis. J. Bacteriol. 187:3352-3358.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 3352-3358
-
-
Lesic, B.1
Carniel, E.2
-
43
-
-
0036184350
-
How many Wolbachia supergroups exist?
-
Lo, N., M. Casiraghi, E. Salati, C. Bazzocchi, and C. Bandi. 2002. How many Wolbachia supergroups exist? Mol. Biol. Evol. 19:341-346.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 341-346
-
-
Lo, N.1
Casiraghi, M.2
Salati, E.3
Bazzocchi, C.4
Bandi, C.5
-
44
-
-
7444233111
-
Wolbachia infection in the newly described Ecuadorian sand flea, Tunga trimamillata
-
Luchetti, A., B. Mantovani, M. L. Fioravanti, and M. Trentini. 2004. Wolbachia infection in the newly described Ecuadorian sand flea, Tunga trimamillata. Exp. Parasitol. 108:18-23.
-
(2004)
Exp. Parasitol.
, vol.108
, pp. 18-23
-
-
Luchetti, A.1
Mantovani, B.2
Fioravanti, M.L.3
Trentini, M.4
-
45
-
-
0027166261
-
Population genetics of a transformable bacterium: The influence of horizontal genetic exchange on the biology of Neisseria meningitidis
-
Maiden, M. C. 1993. Population genetics of a transformable bacterium: the influence of horizontal genetic exchange on the biology of Neisseria meningitidis. FEMS Microbiol. Lett. 112:243-250.
-
(1993)
FEMS Microbiol. Lett.
, vol.112
, pp. 243-250
-
-
Maiden, M.C.1
-
46
-
-
13144252236
-
Multilocus sequence typing: A portable approach to the identification of clones within populations of pathogenic microorganisms
-
USA
-
Maiden, M. C., J. A. Bygraves, E. Feil et al. (13 co-authors). 1998. Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms. Proc. Natl. Acad. Sci. USA 95:3140-3145.
-
(1998)
Proc. Natl. Acad. Sci.
, vol.95
, pp. 3140-3145
-
-
Maiden, M.C.1
Bygraves, J.A.2
Feil, E.3
-
47
-
-
0032709783
-
DNA sequence similarity requirements for interspecific recombination in Bacillus
-
Majewski, J., and F. M. Cohan. 1999. DNA sequence similarity requirements for interspecific recombination in Bacillus. Genetics 153:1525-1533.
-
(1999)
Genetics
, vol.153
, pp. 1525-1533
-
-
Majewski, J.1
Cohan, F.M.2
-
48
-
-
13444252969
-
Super-infections of Wolbachia in byturid beetles and evidence for genetic transfer between A and B super-groups of Wolbachia
-
Malloch, G., and B. Fenton. 2005. Super-infections of Wolbachia in byturid beetles and evidence for genetic transfer between A and B super-groups of Wolbachia. Mol. Ecol. 14:627-637.
-
(2005)
Mol. Ecol.
, vol.14
, pp. 627-637
-
-
Malloch, G.1
Fenton, B.2
-
49
-
-
0033824415
-
RDP: Detection of recombination amongst aligned sequences
-
Martin, D., and E. Rybicki. 2000. RDP: detection of recombination amongst aligned sequences. Bioinformatics 16: 562-563.
-
(2000)
Bioinformatics
, vol.16
, pp. 562-563
-
-
Martin, D.1
Rybicki, E.2
-
50
-
-
13444251528
-
RDP2: Recombination detection and analysis from sequence alignments
-
Martin, D., C. Williamson, and D. Posada. 2005. RDP2: recombination detection and analysis from sequence alignments. Bioinformatics 21:260-262.
-
(2005)
Bioinformatics
, vol.21
, pp. 260-262
-
-
Martin, D.1
Williamson, C.2
Posada, D.3
-
51
-
-
0033082247
-
Mosaic bacterial chromosomes: A challenge en route to a tree of genomes
-
Martin, W. 1999. Mosaic bacterial chromosomes: a challenge en route to a tree of genomes. Bioessays 21:99-104.
-
(1999)
Bioessays
, vol.21
, pp. 99-104
-
-
Martin, W.1
-
52
-
-
0033721611
-
Distribution and evolution of bacteriophage WO in Wolbachia, the endosymbiont causing sexual alterations in arthropods
-
Masui, S., S. Kamoda, T. Sasaki, and H. Ishikawa. 2000. Distribution and evolution of bacteriophage WO in Wolbachia, the endosymbiont causing sexual alterations in arthropods. J. Mol. Evol. 51:491-497.
-
(2000)
J. Mol. Evol.
, vol.51
, pp. 491-497
-
-
Masui, S.1
Kamoda, S.2
Sasaki, T.3
Ishikawa, H.4
-
53
-
-
0031196375
-
groE-homologous operon of Wolbachia, an intracellular symbiont of arthropods: A new approach for their phylogeny
-
Masui, S., T. Sasaki, and H. Ishikawa. 1997. groE-homologous operon of Wolbachia, an intracellular symbiont of arthropods: a new approach for their phylogeny. Zool. Sci. 14: 701-706.
-
(1997)
Zool. Sci.
, vol.14
, pp. 701-706
-
-
Masui, S.1
Sasaki, T.2
Ishikawa, H.3
-
55
-
-
0027287389
-
How clonal are bacteria?
-
USA
-
Maynard Smith, J., N. H. Smith, M. O'Rourke, and B. G. Spratt. 1993. How clonal are bacteria? Proc. Natl. Acad. Sci. USA 90:4384-4388.
-
(1993)
Proc. Natl. Acad. Sci.
, vol.90
, pp. 4384-4388
-
-
Maynard Smith, J.1
Smith, N.H.2
O'Rourke, M.3
Spratt, B.G.4
-
56
-
-
0038220093
-
-
Department of Statistics, University of Oxford, Oxford, United Kingdom
-
McVean, G. A. T. 2001. LDhat. Department of Statistics, University of Oxford, Oxford, United Kingdom.
-
(2001)
LDhat
-
-
McVean, G.A.T.1
-
57
-
-
0026332291
-
Evidence for horizontal gene transfer in Escherichia coli speciation
-
Medigue, C., T. Rouxel, P. Vigier, A. Henaut, and A. Danchin. 1991. Evidence for horizontal gene transfer in Escherichia coli speciation. J. Mol. Biol. 222:851-856.
-
(1991)
J. Mol. Biol.
, vol.222
, pp. 851-856
-
-
Medigue, C.1
Rouxel, T.2
Vigier, P.3
Henaut, A.4
Danchin, A.5
-
58
-
-
0037244272
-
Conservation of a gene conversion mechanism in two distantly related paralogues of Anaplasma marginale
-
Meeus, P. F. M., K. A. Brayton, G. H. Palmer, and A. F. Barbet. 2003. Conservation of a gene conversion mechanism in two distantly related paralogues of Anaplasma marginale. Mol. Microbiol. 47:633-643.
-
(2003)
Mol. Microbiol.
, vol.47
, pp. 633-643
-
-
Meeus, P.F.M.1
Brayton, K.A.2
Palmer, G.H.3
Barbet, A.F.4
-
59
-
-
0029866448
-
Accelerated evolution and Muller's rachet in endosymbiotic bacteria
-
USA
-
Moran, N. A. 1996. Accelerated evolution and Muller's rachet in endosymbiotic bacteria. Proc. Natl. Acad. Sci. USA 93: 2873-2878.
-
(1996)
Proc. Natl. Acad. Sci.
, vol.93
, pp. 2873-2878
-
-
Moran, N.A.1
-
60
-
-
0034255952
-
Lifestyle evolution in symbiotic bacteria: Insights from genomics
-
Moran, N. A., and J. J. Wernegreen. 2000. Lifestyle evolution in symbiotic bacteria: insights from genomics. Trends Ecol. Evol. 15:321-326.
-
(2000)
Trends Ecol. Evol.
, vol.15
, pp. 321-326
-
-
Moran, N.A.1
Wernegreen, J.J.2
-
62
-
-
0022507362
-
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
-
Nei, M., and T. Gojobori. 1986. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol. Biol. Evol. 3:418-426.
-
(1986)
Mol. Biol. Evol.
, vol.3
, pp. 418-426
-
-
Nei, M.1
Gojobori, T.2
-
63
-
-
0034682335
-
Lateral gene transfer and the nature of bacterial innovation
-
Ochman, H., J. G. Lawrence, and E. A. Groisman. 2000. Lateral gene transfer and the nature of bacterial innovation. Nature 405:299-304.
-
(2000)
Nature
, vol.405
, pp. 299-304
-
-
Ochman, H.1
Lawrence, J.G.2
Groisman, E.A.3
-
64
-
-
18244380086
-
Examining bacterial species under the specter of gene transfer and exchange
-
USA
-
Ochman, H., E. Lerat, and V. Daubin. 2005. Examining bacterial species under the specter of gene transfer and exchange. Proc. Natl. Acad. Sci. USA 1:6595-6599.
-
(2005)
Proc. Natl. Acad. Sci.
, vol.1
, pp. 6595-6599
-
-
Ochman, H.1
Lerat, E.2
Daubin, V.3
-
65
-
-
8844231747
-
Variation suggestive of horizontal gene transfer at a lipopolysaccharide (lps) biosynthetic locus in Xanthomonas oryzae pv. oryzae, the bacterial leaf blight pathogen of rice
-
Patil, P. B., and R. V. Sonti. 2004. Variation suggestive of horizontal gene transfer at a lipopolysaccharide (lps) biosynthetic locus in Xanthomonas oryzae pv. oryzae, the bacterial leaf blight pathogen of rice. BMC Microbiol. 4:40.
-
(2004)
BMC Microbiol.
, vol.4
, pp. 40
-
-
Patil, P.B.1
Sonti, R.V.2
-
66
-
-
0036097812
-
Evaluation of methods for detecting recombination from DNA sequences: Empirical data
-
Posada, D. 2002. Evaluation of methods for detecting recombination from DNA sequences: empirical data. Mol. Biol. Evol. 19:708-717.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 708-717
-
-
Posada, D.1
-
67
-
-
0031773680
-
Modeltest: Testing the model of DNA substitution
-
Posada, D., and K. A. Crandall. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14:817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
68
-
-
0035923699
-
Evaluation of methods for detecting recombination from DNA sequences: Computer simulations
-
USA
-
_. 2001. Evaluation of methods for detecting recombination from DNA sequences: computer simulations. Proc. Natl. Acad. Sci. USA 98:13757-13762.
-
(2001)
Proc. Natl. Acad. Sci.
, vol.98
, pp. 13757-13762
-
-
-
69
-
-
10044248762
-
Phylogenetic characterization of Wolbachia symbionts infecting Cimex lectularius L. and Oeciacus vicarius Horvath (Hemiptera: Cimicidae)
-
Rasgon, J. L., and T. W. Scott. 2004. Phylogenetic characterization of Wolbachia symbionts infecting Cimex lectularius L. and Oeciacus vicarius Horvath (Hemiptera: Cimicidae). J. Med. Entomol. 41:1175-1178.
-
(2004)
J. Med. Entomol.
, vol.41
, pp. 1175-1178
-
-
Rasgon, J.L.1
Scott, T.W.2
-
70
-
-
0038032021
-
High levels of multiple Wolbachia infection and recombination in the ant Formica exsecta
-
Reuter, M., and Keller, L. 2003. High levels of multiple Wolbachia infection and recombination in the ant Formica exsecta. Mol. Biol. Evol. 20:748-753.
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 748-753
-
-
Reuter, M.1
Keller, L.2
-
71
-
-
0035909904
-
Antigen polymorphism in Borrelia hermsii, a clonal pathogenic bacterium
-
USA
-
Rich, S. M., S. A. Sawyer, and A. G. Barbour. 2001. Antigen polymorphism in Borrelia hermsii, a clonal pathogenic bacterium. Proc. Natl. Acad. Sci. USA 98:15038-15043.
-
(2001)
Proc. Natl. Acad. Sci.
, vol.98
, pp. 15038-15043
-
-
Rich, S.M.1
Sawyer, S.A.2
Barbour, A.G.3
-
73
-
-
0347513220
-
DnaSP, DNA polymorphism analyses by the coalescent and other methods
-
Rozas, J., J. C. Sanchez-DelBarrio, X. Messeguer, R. Rozas. 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19:2496-2497.
-
(2003)
Bioinformatics
, vol.19
, pp. 2496-2497
-
-
Rozas, J.1
Sanchez-DelBarrio, J.C.2
Messeguer, X.3
Rozas, R.4
-
74
-
-
0024356449
-
Statistical tests for detecting gene conversion
-
Sawyer, S. 1989. Statistical tests for detecting gene conversion. Mol. Biol. Evol. 6:526-538.
-
(1989)
Mol. Biol. Evol.
, vol.6
, pp. 526-538
-
-
Sawyer, S.1
-
75
-
-
0034618559
-
Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS
-
Shigenobu, S., H. Watanabe, M. Hattori, Y. Sakaki, and H. Ishikawa. 2000. Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS. Nature 407:81-86.
-
(2000)
Nature
, vol.407
, pp. 81-86
-
-
Shigenobu, S.1
Watanabe, H.2
Hattori, M.3
Sakaki, Y.4
Ishikawa, H.5
-
76
-
-
0032766857
-
Multiple comparisons of log-likelihoods with applications to phylogenetic inference
-
Shimodaira, H., and M. Hasegawa. 1999. Multiple comparisons of log-likelihoods with applications to phylogenetic inference: Mol. Biol. Evol. 16:1114-1116.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1114-1116
-
-
Shimodaira, H.1
Hasegawa, M.2
-
77
-
-
22444449004
-
Wolbachia variability and host effects on crossing type in Culex mosquitoes
-
Sinkins, S. P., T. Walker, A. R. Lynd, A. R. Steven, B. L. Makepeace, H. C. Godfray, and J. Parkhill. 2005. Wolbachia variability and host effects on crossing type in Culex mosquitoes. Nature 436:257-260.
-
(2005)
Nature
, vol.436
, pp. 257-260
-
-
Sinkins, S.P.1
Walker, T.2
Lynd, A.R.3
Steven, A.R.4
Makepeace, B.L.5
Godfray, H.C.6
Parkhill, J.7
-
78
-
-
0034798494
-
The relative contributions of recombination and point mutation to the diversification of bacterial clones
-
Spratt, B. G., W. P. Hanage, and E. J. Feil. 2001. The relative contributions of recombination and point mutation to the diversification of bacterial clones. Curr. Opin. Microbiol. 4:602-606.
-
(2001)
Curr. Opin. Microbiol.
, vol.4
, pp. 602-606
-
-
Spratt, B.G.1
Hanage, W.P.2
Feil, E.J.3
-
79
-
-
0032722408
-
Wolbachia pipientis: Microbial manipulator of arthropod reproduction
-
Stouthamer, R., J. A. J. Breeuwer, and G. D. Hurst. 1999. Wolbachia pipientis: microbial manipulator of arthropod reproduction. Annu. Rev. Microbiol. 53:71-102.
-
(1999)
Annu. Rev. Microbiol.
, vol.53
, pp. 71-102
-
-
Stouthamer, R.1
Breeuwer, J.A.J.2
Hurst, G.D.3
-
81
-
-
0037189373
-
50 Million years of genomic stasis in endosymbiotic bacteria
-
Tamas, I., L. Klasson, B. Canback, A. K. Naslund, A. S. Eriksson, J. J. Wernegreen, J. P. Sandstrom, N. A. Moran, and S. G. Andersson. 2002. 50 million years of genomic stasis in endosymbiotic bacteria. Science 296:2376-2379.
-
(2002)
Science
, vol.296
, pp. 2376-2379
-
-
Tamas, I.1
Klasson, L.2
Canback, B.3
Naslund, A.K.4
Eriksson, A.S.5
Wernegreen, J.J.6
Sandstrom, J.P.7
Moran, N.A.8
Andersson, S.G.9
-
82
-
-
0031574072
-
The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin, and D. G. Higgins. 1997. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24:4876-4882.
-
(1997)
Nucleic Acids Res.
, vol.24
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
83
-
-
16344387680
-
Widespread recombination in published animal mtDNA sequences
-
Tsaousis, A. D., D. P. Martin, E. D. Ladoukakis, D. Posada, and E. Zouros. 2005. Widespread recombination in published animal mtDNA sequences. Mol. Biol. Evol. 22:925-933.
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 925-933
-
-
Tsaousis, A.D.1
Martin, D.P.2
Ladoukakis, E.D.3
Posada, D.4
Zouros, E.5
-
84
-
-
0032705371
-
Phylogenetic analysis of the 16S rDNA of the cytoplasmic bacterium Wolbachia from the novel host Folsomia Candida (Hexapoda, Collembola) and its implications for the Wolbachia taxonomy
-
Vandekerckhove, T. M. T., S. Watteyne, S. Willems, J. G. Swings, J. Mertens, and M. Gillis. 1999. Phylogenetic analysis of the 16S rDNA of the cytoplasmic bacterium Wolbachia from the novel host Folsomia Candida (Hexapoda, Collembola) and its implications for the Wolbachia taxonomy. FEMS Microbiol. Lett. 180:279-286.
-
(1999)
FEMS Microbiol. Lett.
, vol.180
, pp. 279-286
-
-
Vandekerckhove, T.M.T.1
Watteyne, S.2
Willems, S.3
Swings, J.G.4
Mertens, J.5
Gillis, M.6
-
85
-
-
0037457901
-
Reductive genome evolution in Buchnera aphidicola
-
USA
-
Van Ham, R. C., J. Kamerbeek, C. Palacios et al. (16 co-authors). 2003. Reductive genome evolution in Buchnera aphidicola. Proc. Natl. Acad. Sci. USA 100:581-586.
-
(2003)
Proc. Natl. Acad. Sci.
, vol.100
, pp. 581-586
-
-
Van Ham, R.C.1
Kamerbeek, J.2
Palacios, C.3
-
86
-
-
0036847064
-
Genome evolution in bacterial endosymbionts of insects
-
Wernegreen, J. J. 2002. Genome evolution in bacterial endosymbionts of insects. Nat. Rev. Genet. 3:850-861.
-
(2002)
Nat. Rev. Genet.
, vol.3
, pp. 850-861
-
-
Wernegreen, J.J.1
-
87
-
-
0030965684
-
Biology of Wolbachia
-
Werren, J. H. 1997. Biology of Wolbachia. Annu. Rev. Entomol. 42:587-609.
-
(1997)
Annu. Rev. Entomol.
, vol.42
, pp. 587-609
-
-
Werren, J.H.1
-
88
-
-
0035916791
-
Recombination in Wolbachia
-
Werren, J. H., and J. D. Bartos. 2001. Recombination in Wolbachia. Curr. Biol. 11:431-435.
-
(2001)
Curr. Biol.
, vol.11
, pp. 431-435
-
-
Werren, J.H.1
Bartos, J.D.2
-
90
-
-
0034617230
-
Wolbachia infection frequencies in insects: Evidence of a global equilibrium?
-
Werren, J. H., and D. M. Windsor. 2000. Wolbachia infection frequencies in insects: evidence of a global equilibrium? Proc. R. Soc. Lond. B Biol. Sci. 267:1277-1285.
-
(2000)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.267
, pp. 1277-1285
-
-
Werren, J.H.1
Windsor, D.M.2
-
91
-
-
0029149572
-
Evolution and phylogeny of Wolbachia: Reproductive parasites of arthropods
-
Werren, J. H., W. Zhang, and L. R. Guo. 1995. Evolution and phylogeny of Wolbachia: reproductive parasites of arthropods. Proc. R. Soc. Lond. B Biol. Sci. 261:55-63.
-
(1995)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.261
, pp. 55-63
-
-
Werren, J.H.1
Zhang, W.2
Guo, L.R.3
-
92
-
-
19344378727
-
Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: A streamlined genome overrun by mobile genetic elements
-
Wu, M., L. V. Sun, J. Vamathevan et al. (30 co-authors). 2004. Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements. PLoS Biol. 2:E69.
-
(2004)
PLoS Biol.
, vol.2
-
-
Wu, M.1
Sun, L.V.2
Vamathevan, J.3
-
93
-
-
0032557040
-
Phylogeny and PCR-based classification of Wolbachia strains using wsp gene sequences
-
Zhou, W., F. Roussel, and S. L. O'Neill. 1998. Phylogeny and PCR-based classification of Wolbachia strains using wsp gene sequences. Proc. R. Soc. Lond. B Biol. Sci. 265: 509-515.
-
(1998)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.265
, pp. 509-515
-
-
Zhou, W.1
Roussel, F.2
O'Neill, S.L.3
-
94
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker, M. 2003. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31:3406-3415.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
|