Core promoters: Active contributors to combinatorial gene regulation

Genes and Development

Volumn 15, Issue 19, 2001, Pages 2503-2508

  Smale, S T ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DROSOPHILA; ENHANCER REGION; GENE CONTROL; GENE SEQUENCE; GENETIC CODE; GENETIC VARIABILITY; NONHUMAN; PRIORITY JOURNAL; PROMOTER REGION; REVIEW; TATA BOX; TRANSCRIPTION REGULATION;

ANIMALS; ENHANCER ELEMENTS (GENETICS); GENE EXPRESSION REGULATION; PROMOTER REGIONS (GENETICS);

EID: 0035477896     PISSN: 08909369     EISSN: None     Source Type: Journal    
DOI: 10.1101/gad.937701     Document Type: Review

References (39)

1. Organization and expression of eukaryotic split genes coding for proteins
2. Drosophila TFIID binds to a conserved downstream basal promoter element that is present in many TATA-box-deficient promoters
3. The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila
4. The DPE, a conserved downstream core promoter element that is functionally analogous to the TATA box
5. Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs
6. DNA binding site selection by RNA polymerase II TAFs: A TAF(II)250-TAF(II)150 complex recognizes the initiator
7. The TBP-like factor: An alternative transcription factor in Metazoa?
8. Core promoter specificities of the Sp1 and VP16 transcriptional activation domains
9. Mechanism of synergy between TATA and initiator: Synergistic binding of TFIID following a putative TFIIA-induced isomerization
10. A potential role for Elf-1 in terminal transferase gene regulation
11. Transcription of the lymphocyte-specific terminal deoxynucleotidyltransferase gene requires a specific core promoter structure
12. TBP-associated factors (TAFIIs): Multiple, selective transcriptional mediators in common complexes
13. Cooperativity in vivo between the E2 transactivator and the TATA box binding protein depends on core promoter structure
14. TAFs and TFIIA mediate differential utilization of the tandem Adh promoters
15. Promoter-selective properties of the TBP-related factor TRF1
16. CIF, an essential cofactor for TFIID-dependent initiator function
17. CIF150, a human cofactor for transcription factor IID-dependent initiator function
18. Downstream promoter sequences facilitate the formation of a specific transcription factor IID-promoter complex topology required for efficient transcription from the megalin/low density lipoprotein receptor-related protein 2 promoter
19. The downstream promoter element DPE appears to be as widely used as the TATA box in Drosophila core promoters
20. Orchestrating response: A symphony of transcription factors for gene control
21. Compatibility between enhancers and promoters determines the transcriptional specificity of gooseberry and goosebery neuro in the Drosophila embryo
22. Specific repression of TATA-mediated but not initiator-mediated transcription by wild-type p53
23. Repression: Targeting the heart of the matter
24. Core promoter-specific function of a mutant transcription factor TFIID defective in TATA-box binding
25. Novel cofactors and TFIIA mediate functional core promoter selectivity by the human TAFII150-containing TFIID complex
26. Enhanceosomes
27. Promoter specificity mediates the independent regulation of neighboring genes
28. c-Fos-induced activation of a TATA-box-containing promoter involves direct contact with TATA-box-binding protein
29. Different core promoters possess distinct regulatory activities in the Drosophila embryo
30. Roles of TATA and initiator elements in determining the start site location and direction of RNA polymerase II transcription
31. An experimental test for lineage-specific position effects on alcohol dehydrogenase (Adh) genes in Drosophila
32. The "initiator" as a transcription control element
33. Transcriptional activation by Sp1 as directed through TATA or initiator: Specific requirement for mammalian transcription factor IID
34. The initiator element: A paradigm for core promoter heterogeneity within metazoan protein-coding genes
35. Binding of TAFs to core elements directs promoter selectivity by RNA polymerase II
36. Function of TAF(II)-containing complex without TBP in transcription by RNA polymerase II
37. A basal transcription factor that activates or represses transcription
38. Transcription reinitiation rate: A special role for the TATA box
39. Similar mechanisms for transcription initiation mediated through a TATA box or an initiator element