메뉴 건너뛰기




Volumn 65, Issue 6, 2004, Pages 594-601

Determination of the peptide binding motif and high-affinity ligands for HLA-DQ4 using synthetic peptide libraries

Author keywords

high affinity ligands; HLA DQ; juvenile idiopathic arthritis; peptide binding motif; peptide library

Indexed keywords

AMINO ACID; HLA ANTIGEN; HLA DQ4 ANTIGEN; HLA DQ7 ANTIGEN; NONAPEPTIDE; PEPTIDE; PEPTIDE LIBRARY; UNCLASSIFIED DRUG;

EID: 3042669414     PISSN: 01988859     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.humimm.2004.02.027     Document Type: Article
Times cited : (9)

References (33)
  • 1
    • 0028038426 scopus 로고
    • MHC-dependent antigen processing and peptide presentation: Providing ligands for T lymphocyte activation
    • Germain R.N. MHC-dependent antigen processing and peptide presentation providing ligands for T lymphocyte activation. Cell. 76:1994;287
    • (1994) Cell , vol.76 , pp. 287
    • Germain, R.N.1
  • 6
    • 0028152834 scopus 로고
    • Susceptible and protective major histocompatibility complex class II alleles in early-onset pauciarticular juvenile chronic arthritis
    • Haas J.P., Nevinny-Stickel C., Schoenwald U., Truckenbrodt H., Suschke J., Albert E.D. Susceptible and protective major histocompatibility complex class II alleles in early-onset pauciarticular juvenile chronic arthritis. Hum Immunol. 41:1994;225
    • (1994) Hum Immunol , vol.41 , pp. 225
    • Haas, J.P.1    Nevinny-Stickel, C.2    Schoenwald, U.3    Truckenbrodt, H.4    Suschke, J.5    Albert, E.D.6
  • 9
    • 0027052983 scopus 로고
    • Rapid identification of high affinity peptide ligands using positional scanning synthetic peptide combinatorial libraries
    • Pinilla C., Appel J.R., Blanc P., Houghten R.A. Rapid identification of high affinity peptide ligands using positional scanning synthetic peptide combinatorial libraries. Biotechniques. 13:1992;901
    • (1992) Biotechniques , vol.13 , pp. 901
    • Pinilla, C.1    Appel, J.R.2    Blanc, P.3    Houghten, R.A.4
  • 10
    • 0022492064 scopus 로고
    • Analysis by sequential immunoprecipitations of the specificities of the monoclonal antibodies TU22,34,35,36,37,39,43,58 and YD1/63. HLK directed against human HLA class II antigens
    • Ziegler A., Heinig J., Muller C., Gotz H., Thinnes F.P., Uchanska-Ziegler B., Wernet P. Analysis by sequential immunoprecipitations of the specificities of the monoclonal antibodies TU22, 34, 35, 36, 37, 39, 43, 58 and YD1/63. HLK directed against human HLA class II antigens. Immunobiology. 171:1986;77
    • (1986) Immunobiology , vol.171 , pp. 77
    • Ziegler, A.1    Heinig, J.2    Muller, C.3    Gotz, H.4    Thinnes, F.P.5    Uchanska-Ziegler, B.6    Wernet, P.7
  • 11
    • 0023639662 scopus 로고
    • Purification and characterization of class II histocompatibility antigens from a homozygous human B cell line
    • Gorga J.C., Horejsi V., Johnson D.R., Raghupathy R., Strominger J.L. Purification and characterization of class II histocompatibility antigens from a homozygous human B cell line. J Biol Chem. 262:1987;16087
    • (1987) J Biol Chem , vol.262 , pp. 16087
    • Gorga, J.C.1    Horejsi, V.2    Johnson, D.R.3    Raghupathy, R.4    Strominger, J.L.5
  • 12
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem. 72:1976;248
    • (1976) Anal Biochem , vol.72 , pp. 248
    • Bradford, M.M.1
  • 14
    • 0027170834 scopus 로고
    • Multiple sequence analysis: Pool sequencing of synthetic and natural peptide libraries
    • Stevanović S., Jung G. Multiple sequence analysis pool sequencing of synthetic and natural peptide libraries. Anal Biochem. 212:1993;212
    • (1993) Anal Biochem , vol.212 , pp. 212
    • Stevanović, S.1    Jung, G.2
  • 15
    • 0028002025 scopus 로고
    • Electrospray mass spectrometry and tandem mass spectrometry of synthetic multicomponent peptide mixtures: Determination of composition and purity
    • Metzger J.W., Kempter C., Wiesmüller K.H., Jung G. Electrospray mass spectrometry and tandem mass spectrometry of synthetic multicomponent peptide mixtures determination of composition and purity. Anal Biochem. 219:1994;261
    • (1994) Anal Biochem , vol.219 , pp. 261
    • Metzger, J.W.1    Kempter, C.2    Wiesmüller, K.H.3    Jung, G.4
  • 16
    • 33751143402 scopus 로고
    • Multiple peptide synthesis methods and their applications
    • Jung G., Beck-Sickinger A.G. Multiple peptide synthesis methods and their applications. Angew Chem Int Ed Engl. 31:1992;367
    • (1992) Angew Chem Int Ed Engl , vol.31 , pp. 367
    • Jung, G.1    Beck-Sickinger, A.G.2
  • 17
    • 0027326680 scopus 로고
    • A europium fluoroimmunoassay for measuring binding of antigen to class II MHC glycoproteins
    • Tompkins S.M., Rota P.A., Moore J.C., Jensen P.E. A europium fluoroimmunoassay for measuring binding of antigen to class II MHC glycoproteins. J Immunol Methods. 163:1993;209
    • (1993) J Immunol Methods , vol.163 , pp. 209
    • Tompkins, S.M.1    Rota, P.A.2    Moore, J.C.3    Jensen, P.E.4
  • 18
    • 0029798722 scopus 로고    scopus 로고
    • New ligands binding to the human leukocyte antigen class II molecule DRB1*0101 based on the activity pattern of an undecapeptide library
    • Fleckenstein B., Kalbacher H., Muller C.P., Stoll D., Halder T., Jung G., Wiesmüller K.H. New ligands binding to the human leukocyte antigen class II molecule DRB1*0101 based on the activity pattern of an undecapeptide library. Eur J Biochem. 240:1996;71
    • (1996) Eur J Biochem , vol.240 , pp. 71
    • Fleckenstein, B.1    Kalbacher, H.2    Muller, C.P.3    Stoll, D.4    Halder, T.5    Jung, G.6    Wiesmüller, K.H.7
  • 19
    • 0343920751 scopus 로고    scopus 로고
    • Quantitative analysis of peptide-MHC class II interaction
    • Fleckenstein B., Jung G., Wiesmüller K.H. Quantitative analysis of peptide-MHC class II interaction. Semin Immunol. 11:1999;405
    • (1999) Semin Immunol , vol.11 , pp. 405
    • Fleckenstein, B.1    Jung, G.2    Wiesmüller, K.H.3
  • 20
    • 0028157322 scopus 로고
    • Pool sequencing of natural HLA-DR, DQ, and DP ligands reveals detailed peptide motifs, constraints of processing, and general rules
    • Falk K., Rötzschke O., Stevanović S., Jung G., Rammensee H.G. Pool sequencing of natural HLA-DR, DQ, and DP ligands reveals detailed peptide motifs, constraints of processing, and general rules. Immunogenetics. 39:1994;230
    • (1994) Immunogenetics , vol.39 , pp. 230
    • Falk, K.1    Rötzschke, O.2    Stevanović, S.3    Jung, G.4    Rammensee, H.G.5
  • 21
    • 0031767115 scopus 로고    scopus 로고
    • Naturally processed peptides from HLA-DQ7 (α1*0501-β1*0301) influence of both alpha and beta chain polymorphism in the HLA-DQ peptide binding specificity
    • Khalil-Daher I., Boisgerault F., Feugeas J.P., Tieng V., Toubert A., Charron D. Naturally processed peptides from HLA-DQ7 (α1*0501- β1*0301) influence of both alpha and beta chain polymorphism in the HLA-DQ peptide binding specificity. Eur J Immunol. 28:1998;3840
    • (1998) Eur J Immunol , vol.28 , pp. 3840
    • Khalil-Daher, I.1    Boisgerault, F.2    Feugeas, J.P.3    Tieng, V.4    Toubert, A.5    Charron, D.6
  • 22
    • 0035380479 scopus 로고    scopus 로고
    • Structure of a human insulin peptide-HLA-DQ8 complex and susceptibility to type 1 diabetes
    • Lee K.H., Wucherpfennig K.W., Wiley D.C. Structure of a human insulin peptide-HLA-DQ8 complex and susceptibility to type 1 diabetes. Nat Immunol. 2:2001;501
    • (2001) Nat Immunol , vol.2 , pp. 501
    • Lee, K.H.1    Wucherpfennig, K.W.2    Wiley, D.C.3
  • 23
    • 0030883004 scopus 로고    scopus 로고
    • Unique peptide binding characteristics of the disease-associated DQ(α1*0501, β1*0201) vs the non-disease-associated DQ(α1*0201, β1*0202) molecule
    • van de Wal Y., Kooy Y.M., Drijfhout J.W., Amons R., Papadopoulos G.K., Koning F. Unique peptide binding characteristics of the disease-associated DQ(α1*0501, β1*0201) vs the non-disease-associated DQ(α1*0201, β1*0202) molecule. Immunogenetics. 46:1997;484
    • (1997) Immunogenetics , vol.46 , pp. 484
    • Van De Wal, Y.1    Kooy, Y.M.2    Drijfhout, J.W.3    Amons, R.4    Papadopoulos, G.K.5    Koning, F.6
  • 25
    • 0034777837 scopus 로고    scopus 로고
    • A correlation between the relative predisposition of MHC class II alleles to type 1 diabetes and the structure of their proteins
    • Cucca F., Lampis R., Congia M., Angius E., Nutland S., Bain S.C., Barnett A.H., Todd J.A. A correlation between the relative predisposition of MHC class II alleles to type 1 diabetes and the structure of their proteins. Hum Mol Genet. 10:2001;2025
    • (2001) Hum Mol Genet , vol.10 , pp. 2025
    • Cucca, F.1    Lampis, R.2    Congia, M.3    Angius, E.4    Nutland, S.5    Bain, S.C.6    Barnett, A.H.7    Todd, J.A.8
  • 26
    • 0029902262 scopus 로고    scopus 로고
    • Critical contribution of beta chain residue 57 in peptide binding ability of both HLA-DR and -DQ molecules
    • Nepom B.S., Nepom G.T., Coleman M., Kwok W.W. Critical contribution of beta chain residue 57 in peptide binding ability of both HLA-DR and -DQ molecules. Proc Natl Acad Sci USA. 93:1996;7202
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 7202
    • Nepom, B.S.1    Nepom, G.T.2    Coleman, M.3    Kwok, W.W.4
  • 27
    • 0031780202 scopus 로고    scopus 로고
    • The peptide-binding strategy of the MHC class II I-A molecules
    • Reizis B., Eisenstein M., Mor F., Cohen I.R. The peptide-binding strategy of the MHC class II I-A molecules. Immunol Today. 19:1998;212
    • (1998) Immunol Today , vol.19 , pp. 212
    • Reizis, B.1    Eisenstein, M.2    Mor, F.3    Cohen, I.R.4
  • 28
    • 0031928665 scopus 로고    scopus 로고
    • The P9 pocket of HLA-DQ2 (non-Aspβ57) has no particular preference for negatively charged anchor residues found in other type 1 diabetes-predisposing non-Aspβ57 MHC class II molecules
    • Quarsten H., Paulsen G., Johansen B.H., Thorpe C.J., Holm A., Buus S., Sollid L.M. The P9 pocket of HLA-DQ2 (non-Aspβ57) has no particular preference for negatively charged anchor residues found in other type 1 diabetes-predisposing non-Aspβ57 MHC class II molecules. Int Immunol. 10:1998;1229
    • (1998) Int Immunol , vol.10 , pp. 1229
    • Quarsten, H.1    Paulsen, G.2    Johansen, B.H.3    Thorpe, C.J.4    Holm, A.5    Buus, S.6    Sollid, L.M.7
  • 29
    • 0029823313 scopus 로고    scopus 로고
    • Both alpha and beta chain polymorphisms determine the specificity of the disease-associated HLA-DQ2 molecules, with beta chain residues being most influential
    • Johansen B.H., Jensen T., Thorpe C.J., Vartdal F., Thorsby E., Sollid L.M. Both alpha and beta chain polymorphisms determine the specificity of the disease-associated HLA-DQ2 molecules, with beta chain residues being most influential. Immunogenetics. 45:1996;142
    • (1996) Immunogenetics , vol.45 , pp. 142
    • Johansen, B.H.1    Jensen, T.2    Thorpe, C.J.3    Vartdal, F.4    Thorsby, E.5    Sollid, L.M.6
  • 30
    • 0035214004 scopus 로고    scopus 로고
    • Divergence in the degree of clonal expansions in inflammatory T cell subpopulations mirrors HLA-associated risk alleles in genetically and clinically distinct subtypes of childhood arthritis
    • Wedderburn L.R., Patel A., Varsani H., Woo P. Divergence in the degree of clonal expansions in inflammatory T cell subpopulations mirrors HLA-associated risk alleles in genetically and clinically distinct subtypes of childhood arthritis. Int Immunol. 13:2001;1541
    • (2001) Int Immunol , vol.13 , pp. 1541
    • Wedderburn, L.R.1    Patel, A.2    Varsani, H.3    Woo, P.4
  • 32
    • 0032192359 scopus 로고    scopus 로고
    • New ligands for HLA DRB1*0301 by random selection of favourable amino acids ranked by competition studies with undecapeptide amide sublibraries
    • Jung C., Kalbus M., Fleckenstein B., Melms A., Jung G., Wiesmüller K.H. New ligands for HLA DRB1*0301 by random selection of favourable amino acids ranked by competition studies with undecapeptide amide sublibraries. J Immunol Methods. 219:1998;139
    • (1998) J Immunol Methods , vol.219 , pp. 139
    • Jung, C.1    Kalbus, M.2    Fleckenstein, B.3    Melms, A.4    Jung, G.5    Wiesmüller, K.H.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.